Seriola lalandi dorsalis (Yellowtail amberjack): 111660571
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Entry
111660571 CDS
T06058
Symbol
shank1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
Ank_5
SH3_2
SAM_2
PDZ_6
PDZ
SH3_9
FERM_f0
SH3_1
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
111660571
NCBI-ProteinID:
XP_023269687
LinkDB
All DBs
Position
Unknown
AA seq
2452 aa
AA seq
DB search
MTMPFSPLSSDEEQQRMLGNNRHLYPGAEDEEDEEEEEEEEMEEDERDEDGEEEENGELE
GEEEDDEEEMVEEVRRGGLSRGGRGEVHRQSGKLAGRPGGDRQIRPGNPVHTTNPYSSNP
APTHQQPANQIQQQQQRRLKERSASSVPSEDTHIAMMVFRIGIPDIKQTKCLRFNPDATV
WKAKQQVLCSLTESLRDVLNYGLFQPATDGHDAKFLEEERLLREYPQSFEKGVPYLEFRY
KTRVYKQTNLDEKQLAKLHTKASLKKFMDYIQTSAVDKMAKFIDKGLDPNYQDADTGETA
LSLAVQCEPGGGEAIRVLVEGGAHIDFRAKDGLTPLHKAVRGHRHTALLVLLSLGASPDY
KDRRGLTPLYHTVLTGGDTSCCETLLYHRAKLGIRDENGWDETHQACQNGNSQHLEHLLF
YGADSSSQNASGNTALHICALYNKESCARILLYRGANKDTKNNSGQTPFQVAVMSGHFEL
GEIIKNHRDTDVVPFVESPKYAPQRRESGRTLTIPHPHPFLRANSDSSMNLPDWMAVPNA
PGTNIVSVQGYKHTGTLRSSSSPRGARTRSPSRGRIGDKEDRSRQSRRQGPAPATTTVQT
AGQRRRLYSAVPGRVFVATRAHSAQGEREISFNKGDRVKVLSVGEGGYWEGTVRGRTGWF
PSDCVEEVMLRSQDNRSESRGERAKRLFRHYTVGSYDSFDAPSDYIIKEKTVLLQKKDSE
GFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVK
VGHRQVVNMIRQGGNSLMVKVVMVTRNPDMEEGSRKKIPQQSKRLSTPAIALRSKSMTSE
LEEMVERAATPWKKKSEFESSQVTEKKRTVYQMALNKLDEILAAAQQTISTNEAPGTRGQ
GPKRDRGRSFYGNEPNYADQSGMGMMSSGLGLGYDRGQYTSGHGPPHGMLRQKSIGVPEE
EKQFLHPPTMKFARSLSVPGPDDIPPPPTTAPPDPPFSSAPPLGWRAKSSQQPSVSVSQS
TSTSAHYQPYSQSVHFTHGGRERAGGTTAGPGAVDHTTSYAHAAAHTAQSRTASRKVAYT
GEAVGAGGGAKAAGLRRGYSTAVPPSSIATVMPQQQQTTQSQPQRADRGAAGAGAGGPKG
GARRGKGPLVKQSKVEDLRMGQGTLGGKGSVEKSSIPIPTIIVKAPSTSSSGRSSQGSSV
EADAPASGEADEAKTPHGPPPSTPAPQPPAPPSIPAPPPPSLPSIRAQENLDFTSQFGAA
IVGAARRDRERFHEARRKSASLFMSAEEDVSLGDGVGGVTRTQVSQQQLSTQAESSSTRL
RPSKSIDEGMFSGDTFIHHTRSMPPAFGLPEYSSSALDYQPKSVPTDLYTAAGRQAAPST
TTTFIHPLTGKALDPTSPLGLALAARERALRDDTRLRRATEHHFTRQMSSVVFPSSTVTS
QPVSSAAQSSSSSYLVTSSSLAATTPTVGRPPSPRILRGVGSGWGEEGGGGEREREGGGA
REGLRVRFSEDKTVHTHHYQSQPYQPTYKERERERSRERERELSRERERDKEREGYMRRA
EQAADSSAQQAAQSQPPRRPSFLRMESQADAYILSLTPPSPPPTSSQQTGTATGSAGSGL
MVLPPPAPSVDADDEFVYADPLPPPLEFANSFDRGIGAISGYAQHGMLPNSLTSRQQQVP
PPPPPPPPXXXXXXXXVSGFPAHTPLPSPQAGDSTASSLTSYDSEVANLTQSAPSPSQTS
PNPPPPHSPSTLQPTSIAGPPPPPSVSPPPPPGSYHRPFSMSHPHHLYNSTHTPGRSSPT
PPPHTVAPPPAYRGPPAPSSTAATSAPLRGTASQATTASCAAITTTAATTTSTSTQLYHE
RTHTAHTTSSTAITGSRRTGEHHRHPPATKKGESQETVVDSGIEELDSRSSSDHHLDSIL
ALSGAGVRGDRLDRGDRGVGAGRMGGGGGTVESERAGDFLESYMSYLDGQTFEMQNATAA
ASTYPKTSRFRDGGRAGDLHRQTSTAPASFHSHRRRDEQDDDDGEEGATEDESGQDGYGV
RDMQNLGRPTSPYFDRPRTPEMKPLWGEGQMSGDGQSGTLLEGKKIYPPASSMKPSIINE
LSSKLQQRSKDSWSSQRPLSRHRSRNRFSEDSASALSPPSARSQSPSPISLSQPSLSPSP
TPTSHYPNWGRSSSPQPSVGAQPPRSHSPLSPTSYSPYPTSPKHRPVYRTKALEFQFIPS
RESRKAESHMLQRRRAPSPLISPSERPKLGPPRPSSLPLLPTTPLYSAIYDLRGSITPPS
PGNPLGDPYFSPSPPLFAPSGAPPPPNSTLVVSRSLSPTHFLSGTSSPPLHPLPPPPCLS
YPHLPPPSPTKPFASKPLPYWTKYDVADWLGYLNLGEHRERFLDNEIDGTHLPSLTKEDY
LDLGVTRVGHRMNIERALRSVMDRLSSSPFPISVLSPRDGQTERRRDDGSRS
NT seq
7359 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgccattcagccccctgtccagcgacgaggagcaacaaaggatgctgggaaac
aatcgacacctctatccaggggcagaggacgaggaagacgaggaggaggaagaggaggag
gaaatggaagaagatgagcgtgatgaggatggggaggaggaggagaatggtgagctggag
ggggaggaggaagatgatgaagaggagatggtggaggaggtcaggcgaggaggcctgtca
agggggggcagaggtgaagtacacaggcagtcaggtaaactggccggacgacccggcggg
gacagacagatccggccagggaaccctgtgcacaccactaacccctattcatccaacccc
gcacccacacaccaacagccagccaatcagatacagcagcagcagcagaggaggctgaag
gagcgcagcgccagctcggtgccatctgaggacacccacatcgccatgatggtgtttcgt
attgggattccagacataaagcaaacgaaatgtttgcggtttaacccggatgccacggtg
tggaaggccaagcagcaggtgctgtgctcccttaccgaatccctgcgggacgtcctgaac
tacggtctgttccagccggccaccgacggccacgatgccaagttcttggaggaggagaga
ctgctcagagagtacccacagtcctttgagaaaggggtaccatatttggagtttcgatac
aagaccagggtgtacaaacagaccaatctggatgagaagcaactggccaaactgcacact
aaggccagcctgaagaaattcatggattatattcaaaccagcgctgtggacaagatggcc
aagttcatagacaagggtctggatcccaactaccaggatgctgacactggcgagactgct
ctgtccctggcggtacagtgtgagccgggtggaggtgaggccatccgggtccttgtggag
ggaggggctcatattgacttccgcgccaaagatggactcacaccgctacacaaagctgtt
cggggtcaccgccatacagccctgctggtcctgctgtctctgggtgcgtctccggactat
aaggaccggcgagggctgacgccgctctaccacactgtgctgacagggggcgacacctcc
tgctgcgaaacactgctttaccaccgcgccaagctgggcatcagggatgagaacggctgg
gatgagacacatcaggcctgtcagaatggtaactcgcagcatctggagcacctcctcttc
tatggggcggattcctcctcccagaatgcctctggaaacactgccttgcacatctgtgct
ttatacaacaaggaaagctgtgcacgaatcctgctctaccggggagcaaataaagatacg
aagaataacagcgggcaaaccccctttcaggtggctgtcatgtctggccattttgagctg
ggagaaattatcaaaaaccaccgggatacggacgtggttccctttgtggagtctccaaag
tacgccccacagagacgggagagcggcaggacgctgacaattccccaccctcaccccttc
ctgcgggccaacagtgacagcagcatgaacctgccagactggatggcagtgcccaacgcg
ccggggaccaacatcgtctctgtgcagggctataaacatactggtacactgcggagctcc
agcagtcccaggggggcgaggacacgctccccgtcccgagggaggatcggagacaaggag
gaccggagcaggcagagtcggagacaggggcctgcccccgccaccaccaccgtacaaact
gcggggcagcgcagacgcctctacagcgcagtcccaggacgagtctttgtagctactcga
gcacactctgcacagggagagcgagaaattagtttcaataagggagacagggtcaaagtg
ttgagcgttggcgagggcggttactgggaggggacagtcaggggtcgcacaggctggttc
ccctccgactgtgtggaggaagtgatgcttcgaagccaagacaaccgatcagagagccgc
ggagaacgagccaaaaggctgttccgccattacacggtgggatcctacgacagctttgat
gctcccagcgactacataatcaaggagaagacagtgcttctgcagaaaaaggacagcgag
ggttttggctttgtgctgcgaggagccaaagctcagactcctatcgaggagtttactccc
accccagccttccctgccctgcagtacctggagtcagtggacgagggcggcgtggcctgg
agagccggactcaggatgggggatttcctgatagaggtcaacggtcagaacgtggtgaaa
gtcggacaccggcaggtcgtcaacatgatccgccaaggtggcaacagcctcatggtcaag
gttgtcatggttacccgcaaccccgacatggaggagggttcgaggaagaagattccccag
cagagtaagaggctgagcactccggccatcgccctgcgatccaaatccatgacttcagag
ctggaggagatggtggagagagctgctacgccttggaaaaaaaaatcagaattcgaatcc
tcacaagttacggagaagaagaggacggtctatcagatggctttgaataaactagatgaa
attcttgcagcagctcagcagacaatcagcaccaatgaggcgccggggacacggggacag
gggccaaaaagagacagggggcgaagtttctatggcaatgagccaaattatgcggatcag
tccgggatggggatgatgtcatcggggttgggccttggctatgaccgcggacagtacacc
tcaggtcacggcccaccgcacggtatgctgcggcagaaatccatcggggtgcctgaggag
gagaagcagttcctgcatcctccaaccatgaagtttgcacgcagtctgtcggtgcccggc
ccagacgacatcccccctcctcccaccactgcgccaccagaccctccgttctcctctgct
ccgccgctaggttggagagctaagtcatctcagcagccctctgtctccgtgtcccagtcc
acatccacctccgcgcactaccagccctactcccagtcagtgcacttcacccatgggggc
agggagagggcaggaggtaccaccgctggccccggtgcggtggaccacaccacctcgtat
gcacacgcagctgcccacacggctcaaagcaggactgcttcgcggaaggttgcttacact
ggggaggctgttggagctggtggaggggcaaaggcagcgggtcttaggagaggctacagc
accgccgtccccccatccagcattgccactgtaatgccccagcaacaacagactacccag
agtcaaccccagcgagcagaccgcggtgcagctggggctggggcagggggtcctaaagga
ggggcccgcagaggtaagggccccctggtgaagcaatccaaggtagaggacctgcgcatg
ggccaaggtacactcgggggcaaaggctcggttgagaaaagctccatccccatccccacc
ataatagtcaaggctccttcaaccagcagcagtggacgcagcagccagggcagcagcgtg
gaggccgatgctcctgcatcaggggaggcagacgaagccaaaacaccccacggccctcct
ccctccactcccgctccacagccgcctgctccgccttccatcccagcaccaccacctcca
tccttgccttctatccgagcccaggaaaacctggactttaccagccagttcggggccgcc
attgttggcgcagctcgccgagacagggagcggtttcacgaagcccgcagaaagagcgcc
tccttgttcatgtctgctgaggaggacgtgagtcttggggatggagtaggaggagtaaca
aggactcaggtgtcacagcaacagctcagcacacaggctgaaagttcatcgacacggctg
cgcccgtccaagtctattgacgagggcatgttctctggggacacctttatccatcacacc
cgcagtatgcctccagcctttggtctacctgagtactcctcatctgccctggactatcag
cctaagtctgtgcctactgacttgtacacagccgcaggcaggcaggcagcaccctccact
accaccacctttattcaccctctaacaggaaaggctcttgaccccacatcgccactcggc
ctcgccctggccgccagagagcgtgctctgcgggacgataccaggttgaggagggcaaca
gagcaccatttcacccgccagatgtcgagtgtggtgtttccatcatctactgtcacgtct
cagccggtgtcatctgccgctcagtcctccagctcctcctacctggtcacgtcgtcttct
ctggccgccactacacccactgtcggccgcccaccctcacccagaatcctcagaggagtt
gggagcgggtggggtgaggagggcggtggaggagagagggagcgggaaggaggcggggct
cgcgaggggctaagagttcgcttctctgaggacaaaacggtccacacacaccactaccag
tctcagccgtatcaaccgacctacaaggagagggagcgcgagaggtcgagggagcgggag
agggagctgtcgagggaaagagagagagacaaagagagagagggttacatgaggagggca
gagcaggctgctgacagctctgctcagcaggcggctcagtctcagccgcctcggaggccg
tctttcctcaggatggaaagtcaagccgacgcctatatcctgtccctcacccctccctct
cctccacctaccagctctcagcagacagggaccgctactgggagcgctggttctggcctg
atggttctccctccacctgccccctcggtcgacgcagacgatgagtttgtctacgcagac
cccctcccgcctccgttagagtttgccaacagcttcgacagaggaataggggcgatatca
gggtatgcacaacacgggatgctccctaacagcctgacctcccgccaacagcaggttcca
ccccctccacctcctccaccaccnnnnnnnnnnnnnnnnnnnnnnnntgtaagtgggttc
cctgctcatacacccctgccctcgcctcaggcaggggactccaccgcctccagcctcacg
tcttacgacagcgaggtggctaacctgactcagtctgctccctccccctcccaaacgtca
cccaatcccccaccccctcactcaccttccaccctgcagcccacctcaatagcgggacct
cctcctcccccgtcagtctcaccgccgccccctcccggatcctaccacagacccttctct
atgtcccacccccaccacctttacaacagcactcacactcctgggcgctcctctcccacg
cctcccccgcacacagtcgcgcctcccccggcctaccgtggtcccccagcgccctcctcc
actgctgccacctccgctccgctcaggggcactgcctcccaagccacgaccgctagctgt
gccgctataaccaccactgctgccaccacaacaagcacctccactcagctctaccacgag
cgaacacatactgcacatacaacatcctccaccgccatcacgggcagtcgcaggacaggg
gagcaccaccgccatccccctgctaccaagaaaggagagtcccaggagacagtggtggac
tctgggattgaagagctggacagccgcagcagcagcgaccaccacctggacagcatcctg
gctctaagtggagccggggtccgaggtgacaggctggaccgaggggacagaggagttgga
gctggacgaatgggagggggaggtgggacagtggaatcggaaagggcgggagattttctg
gagtcttacatgagctacctggacggacaaacttttgagatgcagaacgccacagcggca
gcctccacctacccaaaaaccagcaggttcagagacgggggccgtgccggggatctacac
agacagaccagtaccgctcctgcatccttccactcccacagaagaagagatgagcaggac
gacgacgacggcgaggagggagcgacagaggacgaaagtggccaggacgggtacggggtg
agggacatgcagaatttgggacgtcccacttcaccatactttgatcggccacgcactcct
gagatgaagcccctctggggcgaggggcaaatgagcggcgatggtcagtctgggactctt
ttagaggggaagaagatctacccacctgcgtccagtatgaagcccagcatcattaatgag
ctgagcagcaaactgcagcagaggagcaaagacagctggagcagccagagaccactgagc
agacacagaagcagaaacagattttcagaagactcagcctcagctctgagccccccctca
gctcgatcccagtccccgtctccaatctcgttatcacagccatcgctgtccccgtcccct
acaccgacctcccattaccctaactggggacggtcctcatctcctcagccttcagttgga
gctcagcctccgcgatcacattccccgctgtccccgacatcttattccccttaccccacc
tcgcccaaacacagacctgtctaccggaccaaagccctagaatttcagttcatccctagt
cgcgagtcccgcaaagcagagtcacacatgctccagcgtcggcgagcaccaagccccctc
atctccccgtcagagaggcccaagctgggcccaccacgtccatcatcccttccgctcctc
cccaccacacccctatacagcgccatctacgacctccgaggttcaatcaccccgccgtca
cccgggaaccctcttggcgatccttacttctctccctctcctcccctgttcgccccctct
ggtgcccctcctcctccaaactccactttagttgtttcacgatccctctctccaacacac
ttcctgtctgggacctcttctccacccctgcatcctctccctccacccccctgcttgagt
tacccccatctaccgcccccttcccctacgaagccgtttgcctccaagccgctgccctat
tggaccaagtatgacgttgcagactggctaggatacctgaatctgggtgagcacagagag
cgtttcctggacaacgagattgacggcacccacctgccctccctgaccaaggaagactat
ctggacttgggcgtgacacgtgtgggccaccgcatgaacatagaacgggccctgaggagc
gtaatggacaggctgtccagcagcccattccccatttctgttctctcacctcgggatgga
cagactgagaggaggagggacgacgggagtcggagctga
DBGET
integrated database retrieval system
