Seriola lalandi dorsalis (Yellowtail amberjack): 111660823
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Entry
111660823 CDS
T06058
Symbol
crocc
Name
(RefSeq) LOW QUALITY PROTEIN: rootletin
KO
K16469
rootletin
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
slal03037
]
111660823 (crocc)
Cilium and associated proteins [BR:
slal03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
111660823 (crocc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rootletin
CCDC39
Rod_CreS
ACBP4_C
Motif
Other DBs
NCBI-GeneID:
111660823
NCBI-ProteinID:
XP_023269997
LinkDB
All DBs
Position
Unknown
AA seq
2022 aa
AA seq
DB search
MSAAENSDSDSNKLESVIQRLEESVLSEEKRLIVRGPSPDDPPTCLPARVREIVTKNLND
SSAGAMSSVMSLQEENRVLQGELARLEDLLAHSRADRDELAIKYGAISERLEQALRFDTG
DGDHDSPESRSLAQQNVDLRRRLDEEQASYRRKLTAYQEGQQRQAQLVQKLQAKVLQYKK
RCGDLEQMLQEKSSEQEKHRLSSHSETSNGGHQDESSSNLEDALIRLEEEQQRSSSLSAV
NAMLREQLEQAGLANEALSQDIRRLTADWTKAREELEQKESDWRREEESFHSYFSSEHSR
LLMLWRQVVGFRRHVCELKSATERDLSDMRNELARVSHSSQVSCAGLSAALQSREGGAAL
ALEREKALRVQLEQQLKERVAEMMNLQTRTDAERSELNVRLSDSVREAERLKGQMEERER
EIVALARRLEEQSGNDETDMQMMRAHTETLLDTLRDIAQTVLSDGESSSEADQDNSWAPA
GLDARLLPSPLLLSSEVSSPSRPSSLAALPEAALSALHSAVTNKTLQLQDVRGRLLSAQS
TLQQLRKQLSEADSAKRDAEQRNQALQRERDTAQRERDTTQREKDRLKQERDTLASEKLN
LEKTVQAAQSSNQILQMDCEKLQLTVASTQRERDHEREEKEAAVQERDRAKAETQKIQKQ
WDQSESRASAQRGELSAVKETHQQGEVERQLLEREKTQLSEALARAESNNAELSLLLNKL
QSEEAALRDSLAKMSSMNEGLAQDKADLNTYILQLEEEKALLQTQKREVEQEKLTIRDEL
VRLEQDRLELDSTRITLHQSLQDTELSRVGMEAELQSLRAERFKLQEKVTQLCGEVTSLG
SELSLARGEGQRNEVALEEVGRGRAELARDKAALVVQLTASERENTVLSEELAAFRSERE
SLETSLFEVQQQLVQVESRREQLEAENQNLRVRFETAAAELRRVRSDGENALAQAEREKQ
ALTQTLNAAQLEAQQALRKAISEHQEEVERLVSEKEVVRHGLLMEHEVVLRKLRQETDDQ
LQRAQTESEELQDELRSLQHDRDQSLLQAETEKQQALSLKEAEKTVLSDRLSSLQAELSA
AALEAERMSREAAHYKEQEQIRVEALTAELLELRCRLEDSASVHERELHSLRETCIDLQS
RADVALKELDQCRASLSASEESRDQLRRDMLDTERRHNQTQDAAENYRRESTELRRNLSD
VSKERDTLSQSNTQLRETLRSVETERISVKRQCEEKEQRLAVLEENFSSAQKEVMELRSC
LREVERSRLEARRELQELRRQLKVLDGEKEQKGREVADLQTRLSLEEQREEERGKEVFTF
KQKLTEAEATRDSLKKELSQIQKRLVESESGWRGCERELTAQLQEARGCEKKLQDEAKNL
SLRAQTAQDSAAHSSLQLSEAQGRLAATEAELTRAEAGRRDLEFRLSSLQSALTRTLGIG
ASGRGCRGRSPGGSPTSPCTMSRHQSISPMRSSLSPPKEFRVSTPDNTLGSGAVSPERGD
TPLPLPQSELDPETLRSGLRDFLQELRDAHKERDDARCQLGALQREAEELTQERDSTQSR
LTQLQNTLQEYQEGKRGLDERLTTTQILLQQQEETVRRGDRERRALSDRVKDLERALQAS
ETDKKHTQDQLKKQRAAEMRLEAERKRLREALEAAEARATRVELGRRSLEGELQRLKLSL
GDREADSQASQDRHDSLLKQVAEGEARVSLLQREVERLSQALLKAQEGETFLKEKTASLN
QSLQEAAAAHSSTQSRLVALQKTLSVAEQDKRLLQERMDEVRASSGESRRSMATLAERLQ
SLQSELNQSELRREELEAELNNAQEALRQRSAALLEAQRSAQSAQTERAAVEERLRGLQR
AVAMLETEKKDAERQAVRLEKDKNALRNTLDKVERQKLKTEEGSMRLSAEKSRLDRSLNT
TEQELQEAQQQILMLQTQLTEMEQSHSLCESLARQRDEAQREAERVKTSFRDMERTLGTR
ERAHRHRVKGLEEQVSTLKEQLQQEMKRRQPPLPSSLLLAGN
NT seq
6069 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgcggaaaactcagactcggactccaacaaactggagtctgtgatacagagg
ctggaggagagtgttttgtctgaggagaagaggctgatagtccggggcccttcaccagat
gacccccctacatgtctaccagcacgagtacgagagattgtcacaaagaacctcaacgac
agctcggcaggggccatgtcctcggtcatgtccctccaggaggagaaccgagtgctgcag
ggagagctggcgaggctggaggacctgctggcccacagcagagcggaccgagatgagctc
gccatcaaatatggtgcaattagtgagaggctggagcaggcgctgcgtttcgacacggga
gatggggaccatgactcacctgagtcacgcagcctggctcagcagaatgtggatttacgc
aggcgactggatgaggaacaagcctcctacaggcgtaaactcacggcgtaccaggagggt
cagcagaggcaggcacagctggtgcagaagttgcaggccaaagtgctccagtacaaaaag
aggtgtggagatttggagcagatgctgcaggagaagtcgtcagagcaggagaaacacagg
ctgagtagtcacagtgagacgtcaaacggtggccatcaagacgaatcaagcagcaacctg
gaagatgctttaatccgcctggaggaagaacagcagaggagcagcagtttgtctgcggtg
aacgcgatgctgagagagcagttggaacaggccggtttggccaatgaggctctcagccag
gacatccgcaggctcactgccgattggacgaaagccagggaggaactggaacaaaaggag
tctgactggaggagagaagaagagtctttccacagttatttcagcagtgaacacagtcgt
ttgctgatgctgtggcggcaagtggtcgggttcaggaggcatgtctgtgaattaaagagt
gccactgaaagggacttgtcggacatgcgtaacgagctggctcgggtgtcccactcctct
caggtgtcctgtgccggtctgtcagccgcgctgcagagccgcgagggaggagcagctctg
gctctggagcgggagaaagctctgagggttcagctggagcagcagctgaaagaacgcgtg
gcagagatgatgaatcttcagaccagaacggacgcagagagaagtgagctcaacgtcagg
ttgtcagattcagtgcgagaggcggagagactaaagggccaaatggaagagcgagaaaga
gaaatcgtggcactggcgaggaggctggaggagcagagtggtaatgatgagactgacatg
cagatgatgagagctcacactgaaacactgttagacacactgcgggacattgctcagacg
gttttgtcagatggagagtcgtcatcagaagcggaccaggacaactcttgggctccggct
ggccttgatgcgcggctcctcccctcaccgctcctcctctcctcggaggtgtcctccccc
tctcgtccctcctcactggctgctctcccggaggcggcgctgtctgctctccactctgca
gtcacaaacaagacactgcagctgcaggacgttcgagggcgcctgctctctgcccagtcc
acattacaacagttacgaaagcagctttcagaagcagattcggctaaaagagatgcagaa
cagcggaaccaagctctgcagagagagagggacaccgctcagagagagagagacaccaca
cagagagaaaaggaccgtctgaagcaggagagggacacgctggccagtgagaagttgaac
ttggagaagaccgtacaagcagcacagagcagcaaccagatcctgcagatggactgtgag
aagctgcagctgactgtggcgtccacgcagcgagagcgagatcacgagagggaggagaag
gaggccgccgttcaggagagagaccgggcgaaggcagagactcagaagatacagaagcag
tgggatcagagtgagagtcgagcctctgctcagcgtggagagctgtctgcggtgaaggaa
actcaccagcagggggaggttgagaggcagctgctggagagagagaaaacccaactgtct
gaggcacttgctcgtgctgagagcaataatgcagagctctctctgctgctcaacaagctg
cagtctgaggaggctgctctcagagactccctggccaaaatgagcagcatgaatgagggc
ctggcccaggataaagctgacctaaacacctacatcctccagctggaggaagagaaggcc
ctcctgcagactcagaaacgggaggtggagcaggagaagctgaccatcagagatgagctg
gtccggctggagcaggaccggctggagctggactctacccgcatcaccctgcaccagtca
ctgcaggacactgagttaagccgcgtggggatggaggcagagctccagagtctcagggct
gagaggtttaagctgcaggagaaagtcacccagctttgtggcgaggtgacctctctggga
tcagagttaagtcttgccagaggagagggccagaggaacgaggtagccttagaggaggtc
ggccgcggtcgggcagaactggcccgagacaaagcagctctggtggtccagctgacggca
tctgagagagaaaacaccgtgctgtcggaggaactggctgctttcaggtcggagcgggag
tccctggagaccagtctgttcgaggtgcagcagcagctcgttcaggtggagtctcgcagg
gagcagctggaggcggagaaccaaaaccttcgagtccgctttgaaactgctgctgctgaa
ctgaggcgtgttcgctcagatggggagaatgcgttggcccaggctgagagggagaaacag
gctctgactcagactctaaatgcagcacagctggaggcccagcaggctttgcgcaaggcc
atctccgaacatcaggaggaggtggagagactagtctcagaaaaggaggtcgtgcgacac
ggcctgctgatggagcacgaggtcgtgctgaggaaactccggcaggagacggacgatcag
ctccaaagagcgcagacggaaagcgaagagctgcaggatgaactgaggagtctccagcac
gacagagatcagagtcttctgcaggctgagactgagaaacaacaggccctctctctgaaa
gaggcggagaaaacagttctgtctgacaggctgtccagtctgcaggccgagctgtcagct
gctgccctggaggccgagaggatgtccagagaagcggctcattacaaagagcaggagcag
atcagagtcgaggctctgaccgccgagctgctggagcttcgctgtcggctggaggattcg
gcctctgttcatgaacgtgaactccacagtctacgagagacttgcattgaccttcagtcc
cgcgctgatgttgctctcaaagagttggaccagtgcagagcttctctctcagcgagcgag
gagagcagagaccagctcagacgggacatgctggacaccgagcgccgtcacaaccaaact
caggacgcagcagaaaactacagacgagaaagcacagagctgcgacgcaacctcagtgat
gtcagcaaggagagagacactctcagccaatcaaacacgcagctgagagaaactctacga
agtgtagaaacagagagaatcagtgtgaaacgacagtgtgaggagaaggagcagaggctg
gctgtgctggaagagaatttttcatccgctcagaaagaggtgatggagctgcgcagctgc
ctgagagaagtggagaggtcacgactggaagctcggagagaactgcaggagctccgcaga
cagctgaaggttctggacggagagaaggagcagaaagggagggaggttgcagatctgcag
actcgcctgtcactggaggagcaaagagaggaggagagagggaaggaggttttcaccttc
aaacagaagttaactgaagctgaagcaaccagagactccctcaagaaagagctttctcag
attcagaagcgcctggtggagtctgagtcgggctggcgtggctgcgagagagaactgact
gctcagctgcaggaggcgcgtggctgtgagaagaagcttcaggatgaagctaagaacctg
tcgctgcgtgctcagacagctcaggactctgccgcccactccagcctgcagctgagcgag
gcccagggccgcctggccgccacagaggcggagctgacccgggccgaggccgggaggagg
gacctggagtttcgtctgagcagcctccagtcggcactgacgcgaacgctcggcatcggc
gcgagcggcagaggatgccggggaaggagcccgggggggagccccacatcaccctgcacc
atgtcacgccaccagagcatctcacccatgcgctcctctctctcgcctcctaaagaattt
cgagtgagcacccctgacaatactttaggctccggggcggtgtctcctgagagaggcgac
acaccgctgcctctccctcagtcagagctggaccccgagactctgcgaagcggtctcaga
gacttcctccaggagctgcgtgacgcacacaaagagcgggatgatgctcgatgccagctg
ggggccctgcagcgggaggcggaggagctgacgcaggaaagagactccactcagagtcgt
ctcactcagctacaaaacaccttacaggaataccaagaagggaagcgtggtctggacgag
cgtctgaccaccactcagattttgctccagcagcaggaggagacggtgaggagaggagac
agagagaggagagctctcagcgacagggtgaaggatttagagcgagcactgcaggcctct
gagacggataagaaacacacgcaggatcagttgaaaaagcagcgcgctgctgagatgcgt
ctggaggcagagaggaagcgtctgcgggaagcgctggaggcagctgaagcccgggccacc
agggtggagctggggaggcgcagtctggagggggagctgcagagactcaaactgagcctg
ggagaccgggaggctgacagccaggcctcccaggaccgccatgactctctactcaaacag
gtggcagaaggagaagctcgtgtgtctctgctgcagagagaggtggagaggctgagccag
gctctgctcaaagctcaggaaggtgaaactttcctcaaagagaaaaccgcttctctaaac
cagagccttcaggaggcggcggctgctcacagcagcacacagagtcgtctggtggctctg
caaaagacactgagtgtggctgaacaggacaaacgacttctacaggaacgaatggatgaa
gtccgggcgtcatctggtgaatcgaggaggagcatggccaccctcgctgagcgcctgcaa
agccttcagagcgagctgaaccagagcgagctgagacgagaggagctggaggctgagctc
aataacgctcaagaggctctgcgtcagcgttcggctgccctcctggaggcgcagcgcagc
gcccagtcagctcagacagagcgggccgctgtagaggagcgactgcgtgggctgcagcga
gcggtcgccatgcttgagacggagaaaaaagatgctgagagacaggctgtgaggctggag
aaagacaagaatgcactgaggaatacactagataaggttgagcgtcagaagctgaagact
gaagaaggcagcatgcgactgtctgcagagaagagccgtttggatcgctcgctgaacacc
accgagcaggagctgcaggaagcacagcaacagatactgatgctgcagactcagcttacc
gagatggagcagtcacacagtctgtgtgagagtttggcgagacagcgtgacgaggctcag
cgggaggcggagagagtgaagaccagcttcagggacatggagcgaacgctgggcaccaga
gagcgagctcaccgacaccgagtcaaaggcctggaggagcaggtatccaccctgaaggag
cagctgcagcaggagatgaaacggcggcaacctcctcttccatcgtccttactgttggca
ggaaactga
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integrated database retrieval system
