Seriola lalandi dorsalis (Yellowtail amberjack): 111661277
Help
Entry
111661277 CDS
T06058
Symbol
hfm1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
slal03036
]
111661277 (hfm1)
Enzymes [BR:
slal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
111661277 (hfm1)
Chromosome and associated proteins [BR:
slal03036
]
Eukaryotic type
Meiosis-specific proteins
Others
111661277 (hfm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
111661277
NCBI-ProteinID:
XP_023270563
LinkDB
All DBs
Position
Unknown
AA seq
1334 aa
AA seq
DB search
MLDSSDCTLSLDNLFFEKPTVLKVKPLHQEVSPWQLEVPPSLSQIPATQDMQKEAETFAT
LYTSGRPPQQATHAEMPDKGTKRAFVPPMMPQPLCIQGSSGSEVLRPVSEIPSKFRSVFN
EFPFFNYVQSKALDDVLYTGKNFVACAPTGSGKTVLFELAIIRLLMETSEPWRDVKAVYM
APIKALCSQCFESWKKKFGPLGLICKELTGDTEIDDFFEIQDSHIILTTPEKWDSMTRKW
KDNCLLQLVRLFLIDEVHVVKDATRGATLEVVVSRMKAVHDYRRAQNPDAGLSMRFVAVS
ATVPNISDVTDWLSNESGPATYLYMDESHRPVKLRKVVLGFPCNPSQTEFKFDLSLNYKM
ANIIQTYSDQKPALVFCSTRKGVQTSAAVLAKDARFIMSIEHKQRLIKYANSILDTKLRD
LVMLGVGYHHAGVDLSDRKLIEEAFTLGDLPVLFTTRTLAMGVNLPAHLVVIKSTVQYVA
GSCEEYSEADLLQMIGRAGRPQFDTSATAVIMTKVQTREKYMKLMNGMEIIESSLHSHLV
EHLNAEIVLQTISHVNMALDWIRSTFLYIRALKNPTHYGFSADLDRYGIEAKLQELCLKN
LNSLSSIGLINMDEDINIKPTEAGRLMARYFVAFDTMKRFCEVAGTETLSDLIELVSKSR
EFSDIQLRMNEKRPLNTLNRDKNRITIRFPIEGKIKTSEMKVNCLIQAQLGSISIQEFGL
TQETAKIFRNGMRISKCLSEFLSHRYKTGFSALLNALILAKCFRSKLWENSPYVSKQLEK
IGQSLSTAMVNAGLTTFSKIEQANARELELILNRHPPFGNQIRESVIHFPKYEVTLEQLP
RYSCDIAEIVVKVNVKNQAQLLSRKTAPDHHYVSLIIGDSDNNVVFLQKLTDLVLLKSGS
WSKKIEVAKASAGEEISVNLISSEYVGLDIQQKFNVYYSGARRFGTYLGDKRQCNHFCKN
KDLCGHDCCKVGVTVARKRSANQESSFSSYLKDLRNRCDTLAQTPVKRLKMKMSEESVSV
NIQEFAYKPKERLPAVSWYGINHYEASGRLHTETIDLTGEDCAHHTDVVNLDDFDSDYND
YVGDMHRMMETPVQTSAASHAHSQSSSVWMNPGTSGWSQIPEQHLNQINTSSPAFSKRST
VVTNQDTQCETASSLQIPAITFDLGNEWDNWGDFDDENLVHASETAFASCTTNAGSQIQQ
PVEYNVPGFAVTSEPLLFSPSQVQPCITTTSTPLRGILPNTSPEIRKPVSSLVTVRPQNS
ITLDWNKKRPSIFSEEITVKASENFPKQTHVAPATRRFDFFSTMKDSADSSSCVSRSINS
KEEEAFLGIFDGIF
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgttggactccagtgactgcaccttgtctctggacaatctgttttttgagaaacccact
gtcctcaaagtaaagccactgcatcaggaggtcagtccttggcagctggaagtgcctcca
tctctttctcagattccagccactcaggatatgcagaaggaggcagagacatttgctacc
ctatacacaagtggccgacccccgcagcaggcgacacatgcagagatgccggacaagggc
acaaagagagctttcgttccgcccatgatgcctcagccgctctgtatacaaggttcttct
gggtctgaagttttgcgacctgtttctgaaatcccatctaagttcagatccgtcttcaac
gagttcccatttttcaactacgttcagtccaaagcactagatgacgttctttacacaggt
aagaactttgtggcatgtgctcctactggatcgggtaaaacggtgctgtttgagctggcc
atcattcgccttctaatggagacgtcagagccctggagagacgtcaaagctgtctatatg
gcccctatcaaagctctgtgcagtcagtgctttgagagctggaagaagaagtttggtcct
ctgggactgatctgtaaggagcttacaggcgacacagagatcgacgacttctttgagatt
caggactctcacatcatcttgaccacgccggaaaaatgggacagcatgacaagaaaatgg
aaggataactgtctgctgcagctagtcaggctcttccttattgatgaggttcatgtggtg
aaagatgcgacccgtggtgccaccttggaagtcgtggtgagcaggatgaaggcggtacac
gactacaggagagcacagaatccagacgcaggcctctctatgaggtttgtggctgtatca
gccaccgtacccaacatctctgatgtaacagactggttgtctaatgagagcggtccagcc
acatatctgtatatggatgagagtcatcgcccggtgaagctgagaaaggtggtgctggga
ttcccgtgcaacccaagccaaacagagtttaagtttgacctgtcactcaactacaagatg
gccaacatcatacagacttactctgaccagaagcctgctcttgtgttttgctctaccagg
aaaggagtccagacgtcagctgcagttctggccaaggatgctcgattcattatgagtatt
gagcacaagcaaaggttgataaaatatgcaaactctattctggatacaaaactgagagat
ctggtcatgttaggagttggttaccaccatgcaggagttgacttgtcagataggaagctg
atagaagaggccttcactctgggagacttgcctgttctctttactaccaggactctggcc
atgggggtgaacctgccagctcatctggtggtgatcaagtccactgtgcagtatgttgca
ggctcctgtgaagagtacagcgaggctgacctgctgcagatgataggccgagctggaaga
ccacagtttgacacatcagcgactgcagtgatcatgaccaaggttcaaaccagagagaag
tatatgaaacttatgaatgggatggaaatcattgagagcagcttacacagtcacctggtg
gagcacctgaatgctgagattgttctccaaaccatcagtcatgtcaacatggctctggac
tggatacgctccaccttcctctacatcagagccctcaagaaccccacacactacggtttc
tctgctgacttagacagatatggaatcgaagccaaattgcaagaactgtgtctgaagaac
ctcaactctctctcctccattggtctgatcaacatggatgaagatatcaacatcaaacca
acagaggctggcaggttgatggctaggtactttgttgcttttgataccatgaaacggttc
tgcgaagtggctggcactgagacgctgtctgacctgatcgagctggtgtcaaagagcaga
gagttcagcgacattcagctgagaatgaatgagaagaggcccttgaacactttaaacagg
gacaagaacaggatcaccatcaggtttcctattgagggaaagatcaaaaccagtgagatg
aaagtcaactgcttgattcaggctcagctcggttccatctcaattcaagagtttggactt
acacaggagacagcaaagatcttcaggaacgggatgcgcatcagcaaatgtctgtcagag
tttctgagtcatcgatacaagacgggtttctctgctctgctcaacgccctgatcctagct
aagtgcttcagatcaaagctttgggagaactcaccctatgtttccaaacagctggagaag
ataggccaatctctctcaactgccatggtgaacgctggactcaccactttcagcaaaata
gagcaagccaatgccagagagctcgagctgattctcaacagacatccaccatttggcaac
caaatcagagaatctgtcatacacttcccgaagtatgaagtcacattggagcagcttcca
aggtatagctgtgatattgcggagattgtggtgaaggtgaacgtaaaaaaccaagcacag
ctgctgtccaggaaaacagctccagaccaccactatgtctctctgatcatcggagactct
gacaacaatgtggtcttcctacagaaactcacggatttggtgctgttgaagagtggtagc
tggtcgaagaagattgaggtggcgaaggcctcagcgggagaggagatcagtgtcaatctc
atcagctcagaatatgtgggcttggacatccagcagaagttcaatgtgtactactctgga
gccaggaggtttggcacctatctaggcgacaagagacagtgcaaccacttctgcaagaac
aaggatctttgtggccatgactgctgtaaagtaggtgtaactgtggcacggaagaggtca
gcaaatcaagaatccagtttctcttcctatttgaaagacctgaggaacaggtgtgacaca
ctggcgcagactcctgtcaaacgactcaagatgaaaatgagtgaggagtctgtgtctgtc
aacatacaggagtttgcttacaaacccaaagagaggcttcctgctgtttcctggtatggg
ataaaccactatgaagcttcagggagacttcacactgagactatagatctgacaggagaa
gactgtgctcatcacacagatgtagttaatctggacgactttgacagcgattataacgac
tacgttggggacatgcacaggatgatggaaacgccggtccaaacctctgctgcatctcat
gctcactctcaaagttcgtcagtgtggatgaacccaggaacaagtggctggagtcaaatc
cctgaacagcatctcaaccaaatcaatacatccagcccagctttctcaaagaggtccact
gtggtaacgaaccaggacactcagtgtgaaacagcttcatccttacaaataccagcaatc
acctttgaccttggaaatgaatgggacaactggggtgactttgatgatgagaacttggtg
catgccagtgagacagcgtttgcctcatgcacaactaatgctggaagtcaaatccagcag
cctgttgagtacaacgtgccagggtttgctgttacatcagaaccactactcttcagtccc
tcacaggtccaaccctgcataaccactaccagtacaccactgagggggattttaccaaat
acaagtcctgaaatcagaaaaccagtatcgtcactggtcacagtcagacctcagaatagc
atcacactcgattggaataagaagagaccgagcatcttcagtgaagagatcacagtaaaa
gcctcggaaaatttcccaaaacagacgcacgtggcaccagcaaccagaaggtttgatttc
ttctcaacaatgaaagactcggccgactccagctcatgtgtcagcagaagcatcaacagc
aaagaggaggaagctttccttgggatatttgatggtatattttag
DBGET
integrated database retrieval system
