Seriola lalandi dorsalis (Yellowtail amberjack): 111661430
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Entry
111661430 CDS
T06058
Symbol
ptchd4
Name
(RefSeq) patched domain-containing protein 4
KO
K24682
patched domain-containing protein
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
slal04990
]
111661430 (ptchd4)
Domain-containing proteins not elsewhere classified [BR:
slal04990
]
Other domain-containing proteins
Patched domain-containing proteins
111661430 (ptchd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
DUF7041
Motif
Other DBs
NCBI-GeneID:
111661430
NCBI-ProteinID:
XP_023270762
Ensembl:
ENSSLDG00000019279
LinkDB
All DBs
Position
Unknown
AA seq
925 aa
AA seq
DB search
MCFIGGNGASASWILWRMLRQVIHRGLKASFYWLGLFVSRHPVFFLTVPAVLTIIFGSTV
LSRFKPETDLEVLVAPTHSLAKIERSLANSLFPIDQSKHKLYSDLHTPGRYGRLILLAKS
GGNILELADQVLQVHKQVLDLRVNYKGFNYTFAHLCVLSHRDKRCLLDDIITIFEDIRQA
VLSNSTFLKVPVSYPNTTLKDGRVSFIGHQLGGVSFSPNSRDQQVKFARAVQITYYLRNH
GPVVQDAIAERWENEFCALVSRLSTSEAPHATDQLHIQSLTSFSLWRDFHQTGVLAKGEV
LVSLVLVLLAATISSSMRDCLRGKPFLGLLGVLTICIANVTAAGIFFISDGKFNSTLLGI
PFFAMGHGTKGVFELLAGWRRTRENLPFKERVADAFADVMVCYTMTSSLYIITFGMGASP
FTNIESVKIFCQSMCVAILVNYFYVFSFYGSCLVFAGQLEQNRYHSVFCCKIPSVEYLDR
QPTWFKTMMSDGHDLSTHHDSVPYQNHFIQHFLREHYTEWITNTYVKPFVVILYLIYASF
SFMGCLQISDGSNIVNLLASNSPSVSYALTQQKYFSNYSPVIGFYIYEPIEYWNSTVQEH
LKTLSHGFNKISWMDNFFHYLRVVNVSASTKSDFISILKGSFLRSPEYQHFTEDIIFSKN
RETDEYDIIASRMYLVARTTEKKREEVVELLEKLRPLMLINSIKFIAFNPTFVFMDRYSS
SVISPILTSGFSVLTILILTFFLVINPLGNFWLILTVTSVELGVLGLMTLWNVGMDSISI
LCLIYTLNFAMDHCAPHLYTFVLATEHTRTQCIKLALEEHGAAILQNTSCFVIGIMPLVF
VPSNLTYTLFKCSLLTAGCTVLHCFVILPVFLTFFPPSKKRHKKKKRAKRKERERERERE
REREREREEIECIEVRENPDHVTNV
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttcatcggaggaaacggggcatctgcaagctggattttgtggaggatgctgcgg
caagtgatacacagagggctcaaggcttcgttctactggctgggcttattcgttagcagg
caccccgttttcttcctcactgtccccgcggtcctcaccatcattttcggatctaccgtt
ctcagccgattcaagccggagacggacctggaggtgctggtcgccccgactcacagcctc
gccaagatcgagcggagtctcgccaacagcctgtttcccatcgaccagtcgaagcacaag
ctgtactcggatttgcacaccccgggcagatatggcaggctgatcctgctcgccaagtcc
gggggaaacatcctggagctagccgaccaggtcctgcaggtccacaagcaggtgctggat
ttacgcgttaattacaagggattcaattacacgttcgcgcacctctgcgtcttgagccac
agagacaagcgctgcctcttggatgatatcatcaccatcttcgaagatatcaggcaggct
gtgctctccaacagcactttcctcaaggtgcccgtgagctatccaaacacaacattaaag
gatggccgcgtgtccttcatcggccaccagctgggcggcgtgtccttctcgcccaacagc
cgagaccagcaggtcaagttcgcccgcgccgtacagatcacctactacctccgcaaccac
ggccccgtggtgcaggatgccatcgccgagcgctgggagaacgagttctgcgccctggtc
agccggctgtccacgtccgaggcgccgcacgcgaccgaccagctccacatccagtcgctc
acctccttcagcctgtggcgggacttccaccagacgggcgtgctggccaagggggaggtg
ctggtcagcctggtgctggtgctcctggccgccaccatctccagctccatgcgagactgc
ctgagggggaagccgttcctgggcctcctgggagtcctgaccatctgcatcgccaacgtg
accgccgcggggatcttctttatatcagacgggaagttcaactccacgctgctggggatc
ccattctttgccatgggccatggaaccaaaggagtgttcgagctgctagctggctggagg
agaacgagggaaaacctccccttcaaggagcgcgtggcggacgcttttgccgacgtgatg
gtgtgctacaccatgaccagctcgctttacatcatcaccttcggcatgggtgccagccct
ttcaccaacatcgagtcggtgaaaattttctgccagagcatgtgcgtcgccatactggtc
aactacttctacgttttctctttctacggctcctgcctggtgtttgccggacagctggag
cagaaccgctaccacagcgttttctgttgtaaaatcccctcggtggagtatctggaccgg
cagcccacttggtttaaaaccatgatgagtgacggccatgacctgtccacgcaccacgac
agtgtcccctaccagaatcacttcatccagcacttcctgcgagagcactacacagagtgg
attaccaacacttatgtcaaaccctttgtcgtcattctctatctcatctacgcctccttc
tcattcatgggatgtttacaaatcagtgatgggtcgaatatcgtcaacctgctggccagt
aactctccgagcgtttcgtatgctctgacccagcagaaatacttcagtaactacagtcct
gtgatcgggttttacatttacgagcccatcgagtactggaactccacggtgcaggagcac
ctgaagaccctgagtcatggctttaacaagatctcctggatggacaactttttccactac
ctgcgggtggtcaacgtcagtgcgtcaacaaagagcgacttcatctccatcctgaaaggc
tccttcctgcgcagcccggagtaccagcacttcaccgaggacatcatattctccaagaac
cgtgagactgacgagtacgatatcattgcctcgcggatgtacttggtggcgcggacgaca
gagaagaagcgcgaggaggtggtggagcttctagagaagcttcgtccgttgatgctaatc
aacagcatcaagttcattgccttcaatcccacattcgtgttcatggaccgctacagctcc
tccgtcatctcgcccatcctgacctcaggcttcagtgtgctcactatccttatcctcact
ttcttcctggtcatcaaccccttggggaacttctggctcatcctcacggtcacatccgtg
gagctgggtgtcttgggtttgatgaccctctggaacgttggcatggacagcatctcaatc
ctgtgccttatttataccctcaacttcgccatggatcactgtgcaccacacctgtacact
tttgtgctggccaccgagcacactaggacgcagtgcatcaagttggcactggaggagcac
ggggccgccatcctgcagaacacatcctgctttgtgatcgggatcatgcccctggtgttt
gtgccttccaatctgacctacacactgttcaagtgctccctcctcactgcgggctgcact
gtgctgcactgcttcgtcatcctgccggtcttcctgaccttcttcccgccctccaaaaag
agacacaagaaaaagaaacgggccaagcggaaagagcgggagagggagagggaacgggag
agggagagggaaagagaaagggaggagatagagtgcattgaagtcagggagaatcctgat
catgtgacaaacgtctga
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