Seriola lalandi dorsalis (Yellowtail amberjack): 111662129
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Entry
111662129 CDS
T06058
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111662129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slal04121
]
111662129
Enzymes [BR:
slal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111662129
Ubiquitin system [BR:
slal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
111662129
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
PRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
zf-RING_5
NDNF
Motif
Other DBs
NCBI-GeneID:
111662129
NCBI-ProteinID:
XP_023271652
Ensembl:
ENSSLDG00000001224
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCTPSEPIQSISAFQCPTCR
YVITLNQRGLEGLKRNVTLQNIIDRYQKASLSGPNSPNETRRERAAPDSKAMTSPGDRVQ
CQFCEQDPPQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPLLDSHLRGLMCLEH
EDEKVNMYCVTDEQLICALCKLVGRHRDHQVAALSDRYDKLKKSSGRFLCVGRDHSHQEA
DQQALDSNLSSLIKRTSELESLMGKLIQTCQHVEVNASRQENKLLEECEVLINIIQQRRQ
IIATKIKEGKSVRLRKLAQQIASCKQCIERSSSLISQADQTLKETDHARFLQTAKSICER
VSMATASSQILLPEINLNDTFDSFALDFTREKKMLETLDYLTAPNPPVIREELCTASYDT
ITVHWTSDDEFSVVSYELQYAIFTSQSNVVSLCNSADSWMIVPNIKQNHYTVHGLQCGTK
YIFIVKAINQAGNRSSEPGKLKTNSQPFKLDPKSAHRKLRVSHDNLTVERDETSSKKSHS
QDRFSSHSSYGVTGNVYIDSGRHYWEALIGGSTWFAVGIAYKSAPKHEWIGKNSASWVLS
RCNNSWVVRHNSKEMPIEPSPHLRRLGILLDYDSGSLSFYDAVGSQHLYTFDIAFAQPVC
PVFNVWNRCLTILTGLPIPDHLEGTDYNN
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggagctgacctgcccaatctgcctggagctctttgaggaccca
ctgctcttgccctgtgctcacagcctttgtttcaactgtgcccatcgcatcctggtctcc
cactgcacccccagcgagccaattcagtccatcagtgcctttcagtgcccgacctgtcgc
tatgtcatcacccttaaccagaggggcctagagggacttaaacgcaacgttacattacag
aacatcattgaccgctaccagaaagcttctctgagtggacctaactctcctaacgagacc
cggcgtgagcgagccgcccccgacagcaaagccatgacatctcctggtgaccgggtgcaa
tgtcagttctgcgagcaggaccctccgcaggatgctgtgaagacctgcgtcacctgtgag
gtgtcatactgcgacgaatgtcttaaggccacccaccccaacaagaagcccttcacgggc
caccgtctaatcgagcccttgctggactcccatctgcgagggctaatgtgtctggagcac
gaggatgagaaggtcaacatgtactgtgtgacagatgaacagttgatctgtgcattgtgt
aagctggttggccgacaccgagaccaccaagtggcagccctcagtgacagatatgacaaa
ctcaagaaatcttctggccgctttctctgtgtggggcgtgatcattcacaccaggaggca
gaccagcaagccttggattccaacctcagcagtctcatcaagaggaccagtgagttggaa
agtctgatgggcaaacttatccaaacctgccaacacgtggaggtaaatgcatcacgacag
gaaaacaagctgcttgaggagtgtgaggtgctgattaatatcatacagcagcgacgacaa
atcatcgccaccaagataaaggaggggaagtctgtgcgcctgagaaagctagcccagcag
atagccagctgcaaacagtgcatcgagaggtcctcctccctcatctctcaagccgaccaa
accctgaaggagacagaccacgctcgcttccttcagacggctaaaagtatctgtgagaga
gtatcaatggcaacggcatcctcccaaatcctgttaccagaaattaatctgaatgacact
tttgatagttttgctttggacttcacgagggagaagaaaatgctagaaaccctggattac
ctcacggcaccaaatccaccagtaatccgtgaggaattgtgcacagcttcatatgacacg
atcacagtccactggacatcagatgatgaattctctgtcgtatcatatgaacttcagtat
gccatcttcaccagccaatccaatgttgtcagtttatgtaactctgctgatagctggatg
atcgtaccaaacatcaagcaaaatcactacacagtgcacggactccagtgtggcacaaag
tacatcttcatagtgaaggccataaatcaggctggaaaccgcagcagtgaaccagggaaa
ctcaagacaaacagtcagccgttcaagttggacccaaagtccgctcataggaagttgagg
gtgtctcatgacaacctgacagtggagagggatgagacatcatccaagaagagccacagt
caggaccgcttctccagccacagcagctacggtgtcacaggaaacgtctacatcgacagc
ggccgccactactgggaggctctgataggaggaagcacatggtttgcagtgggcattgcg
tacaagtcggcgccaaaacatgagtggatcggcaaaaactcggcctcgtgggtactgtct
cgctgcaacaactcgtgggtggtgcgtcacaacagcaaggagatgcctattgagccttca
ccccacctgcggcgtctcggcatattgttggactacgactctggatctctgtctttctac
gatgctgtcggctctcagcacttgtatacctttgacatcgcctttgctcagccagtttgc
cccgtgttcaatgtgtggaacaggtgtttaacaatcctcacgggactgcccatcccagac
cacttagaggggaccgattacaacaactga
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integrated database retrieval system