KEGG   Seriola lalandi dorsalis (Yellowtail amberjack): 111662335
Entry
111662335         CDS       T06058                                 
Symbol
rbbp5
Name
(RefSeq) retinoblastoma-binding protein 5 isoform X1
  KO
K14961  COMPASS component SWD1
Organism
slal  Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:slal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:slal03036]
    111662335 (rbbp5)
Chromosome and associated proteins [BR:slal03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     111662335 (rbbp5)
    COMPASS/SET1 complex (yeast)
     111662335 (rbbp5)
    MLL-HCF complex
     111662335 (rbbp5)
    MLL3/MLL4 complex
     111662335 (rbbp5)
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40 Beta-prop_EML ANAPC4_WD40 WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_HPS5 WD40_MABP1-WDR62_2nd Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_LRRK2 Beta-prop_WDR75_1st Beta-prop_NUP159_NUP214 WDR54 Beta-prop_SCAP Beta-prop_WDR11_1st Beta-prop_TEP1_C Beta-prop_Vps41
Other DBs
NCBI-GeneID: 111662335
NCBI-ProteinID: XP_023271929
Ensembl: ENSSLDG00000006699
LinkDB
Position
Unknown
AA seq 566 aa
MNLELLESFGQNYPEEADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAK
IISAHIHPVCSLCWSRDGHKLVSASTDNIVSQWDVLTGDCDQRFRFPSPILKLQYHPRDM
DKVLVCPMKSAPVLLTLSDSKHVVLPVDDDSDLNVVAAFDRRGEYIYTGNAKGKILVLNT
NTQELVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYDGREILTCGRDGEPE
PMQKLQDLVNRTPWKRCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLD
VAWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDKS
EPEQTGADAAEDEEVDVTTVDPIVAFCSSDEELEDYKALLYLPIAPEVEDPEENPFGPPP
DASVQTSAPEDALAGGDKKQRQPSSDGGPAKKKARTTTIELQGVPSDEVHPLLGVKGDGK
SKKKAAGRPKGSKGKDKDFPFRPKPYRGERPSFPVEALGSSGPGVGVGVGGGGGGGGGMK
GRAEGGLAPGSLVSQSYKQHDIGGMD
NT seq 1701 nt   +upstreamnt  +downstreamnt
atgaatctagaactgctcgagtcgttcgggcagaactacccagaggaggcagatggcact
ctggactgtatcagtatggccctcacctgcaccttcaaccgctggggcaccctgctggct
gtgggctgcaacgatggccgcatcgtcatctgggactttctcacacggggcatcgccaaa
atcatcagtgcacacatccacccagtctgctctttatgctggagtcgagatggccacaag
ctggttagtgcctccacagacaacattgtctcacagtgggatgtcctgactggagactgt
gaccagagattccgtttcccctcacccatcctgaaactgcagtaccacccaagagacatg
gacaaggtgttggtgtgtcccatgaagtcagccccagtcctgttgactctctcggactct
aaacatgttgtcctgcctgtggacgatgactcagacctgaatgtggtagcagcctttgac
cgacggggcgagtacatctacactggcaatgccaaaggaaagatccttgtgttgaacaca
aacacccaggagctggttgcgtccttcagagtgaccactggcaccagcaacaccactgcc
atcaaatccatcgaatttgcacgcaagggcagttgcttccttataaacacagcagacagg
atcatcagagtgtatgacggcagggagatactcacctgtggccgagacggtgaaccggaa
cccatgcagaaactgcaggacctggtcaacaggactccgtggaagcgctgctgtttctct
ggggatggcgagtacatcgtggccggttcagccagacagcacgccctctacatctgggag
aagagcatcggcaacctggtgaagatcctgcatggaaccagaggagagctgctgctggat
gttgcttggcatcctgtccgtccaattatcgcctctatctccagtggagtggtgtccatc
tgggctcagaaccaagtggaaaactggagtgcgtttgctccagacttcaaagaactggat
gagaatgtggagtacgaggagcgagagtctgagttcgacatcgaggatgaagacaagagt
gaacctgagcagacaggcgcagacgctgcagaggatgaagaggtggatgtcactactgtc
gaccccatagttgctttttgcagcagtgatgaggagcttgaggactataaggctttgctg
tacctgcctattgcccctgaagttgaggatccagaggaaaaccccttcggccccccaccg
gatgcctcggttcagacttctgccccagaggacgcattggctggcggtgacaagaagcag
cgacagccttcatctgacggaggcccagccaaaaagaaagcccgcaccaccaccatagaa
ctgcagggggtgcccagtgacgaggtacaccccctacttggtgtgaagggggatggcaag
tccaagaagaaggcagcaggtcggcccaaaggttccaaaggtaaagacaaagacttcccc
ttcaggccgaagccctacaggggcgaacggccctccttccccgtggaagccttgggcagc
tctggcccaggagttggagttggagttggaggcggaggaggaggaggaggagggatgaag
ggcagggcagaggggggcctggccccagggagcctggtctcacagtcgtacaaacagcat
gacattggagggatggactga

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