Seriola lalandi dorsalis (Yellowtail amberjack): 111662401
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Entry
111662401 CDS
T06058
Name
(RefSeq) ATP-dependent RNA helicase DDX39A-like
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slal03041
]
111662401
Enzymes [BR:
slal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111662401
Spliceosome [BR:
slal03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
111662401
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
111662401
NCBI-ProteinID:
XP_023272020
Ensembl:
ENSSLDG00000017643
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MAENDVDNELLDYEEDEEPQGAPESAAPAGKKEVKGSYVSIHSSGFRDFLLKPELLRAII
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMPTVKAAVFFGGLAIKKDEEVLKKNCPHIVVGTPGRILALIR
NKTLSLKNVKHFVLDECDKMLEQLDMRRDVQDIFRITPHEKQVMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCI
ALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAKTLNDVQDRFEVNVAELPDEIDIS
SYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaatgacgttgataacgagctgctcgactacgaagaagatgaagagccccaa
ggagcccccgagagcgcagccccagcaggcaagaaggaggtgaagggttcctacgtttcc
atccacagctctgggttcagggatttcctgctcaaaccagagctgctccgtgccatcatc
gactgtggttttgagcatccgtctgaagtccagcatgaatgcatcccacaagctatcctg
ggcatggacatcctttgtcaagccaaatctggtatgggcaagacagctgtgtttgtgctg
gccacactgcaacagatcgaaccagtcgacggacaggtctctgtattagtcatgtgccac
acacgagagctggccttccagatcagtaaagagtacgagcgtttctccaagtacatgccc
acggtaaaagcagcagtattctttggtggcctggccatcaagaaggacgaagaggtcttg
aagaagaactgccctcacatcgtcgtcggaacaccgggccgcatcctcgctctcatccgg
aacaagaccctcagtctgaagaacgtgaagcattttgtcctggatgagtgtgacaagatg
ttggagcagctagacatgaggcgtgacgtacaggacatcttcaggatcacaccccatgag
aagcaggtcatgatgttcagtgcaactctgagcaaagagatccgaccagtctgccgcaaa
ttcatgcaggatcccatggaagtatttgtggatgacgagaccaaactgacactccacggc
ctgcaacagtactactgcaagctgaaggacagcgagaagaaccgcaagctctttgacctc
cttgatgtgttggagttcaaccaggtggtgatctttgtcaagtcagtccagcgctgcatc
gctctgtcccagctcctggtggaacaaaatttccctgccattgccatccacaggggaatg
gctcaggaggagaggctgtctcgctatcagcaattcaaggactttcaaaggcggatcttg
gtggcgactaacctctttggccgagggatggacatcgagcgagtcaatatcgtcttcaac
tacgacatgccagaagattctgacacctacttgcacagggttgcccgtgctggtaggttt
gggaccaaaggcctggctataacctttgtgtctgacgagaccgatgccaagactctgaac
gacgtgcaggaccgctttgaggtcaacgtggcggagctgccagacgagattgacatctcc
tcttacatcgagcagtccagatga
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