Seriola lalandi dorsalis (Yellowtail amberjack): 111662549
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Entry
111662549 CDS
T06058
Name
(RefSeq) LOW QUALITY PROTEIN: cyclic nucleotide-gated channel rod photoreceptor subunit alpha-like
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
111662549
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
slal04040
]
111662549
Ion channels [BR:
slal04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
111662549
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
DUF3043
Presenilin
Tim54
NPR3
Sec62
Piezo_TM1-24
Transformer
Serinc
CAF1A_acidic
CDC45
PFF1_TM
EMC3_TMCO1
ADI
Neur_chan_memb
SLC52_ribofla_tr
MDM10
ALMT
Mat89Bb
CLN3
RR_TM4-6
Motif
Other DBs
NCBI-GeneID:
111662549
NCBI-ProteinID:
XP_023272207
Ensembl:
ENSSLDG00000018529
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MAKVAPLGPPSTSKLTPPTIVLQDMEEESGDVREGDRAAQRAGAGVLFNVNNSNNNEEET
RRRKKKKEKKERKEKKEKEKQEKKERKEKKKKEKEEKEKEKEKEKERRKKEKEKKEKEEA
PKEITVIDPAGNTYYHWLFIITIPVMYNWTLIIARACFEELQTEYVHYWFIVDFVCDMVY
IADMIFRTRTGYLEQGLLVKDEKKLRERYMNSFQFKLDLISMIPTDLLYLVFGLSFPEIR
LNKLFRFNRMLEFFQRTETRTNYPNALRISNLVMYIVIIIHWNACLYYSFSKAIGFGSDR
FVYPDPKDPEFGRLVRKYAYSMYWSTLTLTTIGETPPPVENSEYIFVVTDFLVGVLIFAT
IVGNVGSMITNMNAARADFQARIDAIKQYMSFRKVTKDLEKRVIKWFDFLWTNKKAVDER
EVLKYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGD
IGREMYIIKEGKLAVVADDGVTQFVVLSDGSYFGEISILAIKGSKAGNRRTANIRSIGYS
DLFCLSKDDLMEALKEYPDAKALLEEKGRQILMKDGLLDLEVAAQGPDPKEIEEKVERMT
STLDILQTRYARLLAEHEATHSKLKHRVTRLERKLPLPPRADQPGNAPPPPTPEPTK
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagtggctccactaggcccgccctccacctccaagttaactccgcccaccatc
gttctacaagacatggaggaggagtcaggtgacgtcagggagggggacagagcggctcaa
agagcaggagcgggagttctgttcaacgtaaacaacagcaacaacaacgaggaagagacg
agaagaagaaaaaagaagaaagagaagaaagagagaaaagagaagaaggagaaggagaag
caggagaagaaggagaggaaggagaagaaaaagaaggagaaggaggagaaggagaaggag
aaggagaaagagaaagagagaaggaagaaggagaaagagaagaaggagaaagaggaggcc
cccaaggagatcacagtgatcgacccggcaggaaacacctactaccactggctcttcatc
atcaccatccccgtcatgtacaactggaccctgatcatcgccagggcgtgtttcgaggag
ctgcagactgagtacgtgcactactggttcatcgtggacttcgtctgtgatatggtttac
atcgctgatatgatcttcaggaccaggactggttacctggagcagggtctcctggtgaag
gacgagaagaagctgcgtgagcgctacatgaacagcttccagttcaaactggacctgatc
tccatgattcccaccgacctgctgtacctcgtgttcggactcagcttccccgagatccgc
ctcaataaactgttcaggttcaacaggatgctggagttcttccagaggacggagaccagg
accaactaccccaacgctcttcgtatctccaacctcgtcatgtacatcgtcatcatcatc
cactggaacgcctgcctctactactccttctccaaggccatcggtttcggctctgacagg
ttcgtgtatcccgacccaaaggatccagagtttggtcgcctggtgaggaagtacgcctac
agcatgtactggtccacgctgacgctcacgaccatcggagaaacgccgccccctgtggag
aactcagagtacatcttcgtcgtcactgacttcctggtgggtgtgttgattttcgccacc
atcgtcggtaacgtcggctcgatgatcaccaacatgaacgctgccagagccgacttccag
gctcgcatcgacgccatcaaacagtacatgagcttccgaaaggtgacgaaggacctggag
aaacgagtcatcaagtggtttgacttcctgtggaccaataagaaagcagtggacgagcgg
gaggtgctgaagtacctgcctgacaaactgagagccgagatcgccatcaacgtccacctg
gacactctgaagaaggtgcgtatctttgcggactgcgaggccggtctgctggtggagctg
gtgctgaagctgcagcctcaggtctacagcccgggagactacatctgtaagaagggcgac
atcggcagagagatgtacatcatcaaggagggaaaactcgctgttgtcgccgacgatggc
gtcacgcagtttgtggttctgagcgatggaagctactttggcgagatcagcatcctggct
attaaaggcagtaaggcgggaaacaggaggacggcaaacatcaggagcatcggctactcc
gacctcttctgtctgtccaaagacgacctgatggaggcgctgaaggagtatcctgacgcc
aaggctctgctggaggagaagggacggcagattctgatgaaggacggactgctggacctg
gaggtggcagcgcagggccccgaccccaaagagatcgaggagaaggtggagcggatgacg
agcacgctggacatcctgcagacgcggtacgcgcggctgctggccgagcacgaggccacg
cacagcaaactcaaacacagagtcacgcggctggagaggaagctgccgctgccgccgcgc
gccgaccagccgggcaacgccccgcccccgcccacacctgagccgaccaaataa
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