Seriola lalandi dorsalis (Yellowtail amberjack): 111662584
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Entry
111662584 CDS
T06058
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03030
DNA replication
slal03410
Base excision repair
slal03420
Nucleotide excision repair
slal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111662584 (rfc4)
03410 Base excision repair
111662584 (rfc4)
03420 Nucleotide excision repair
111662584 (rfc4)
03430 Mismatch repair
111662584 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slal03032
]
111662584 (rfc4)
03036 Chromosome and associated proteins [BR:
slal03036
]
111662584 (rfc4)
03400 DNA repair and recombination proteins [BR:
slal03400
]
111662584 (rfc4)
DNA replication proteins [BR:
slal03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
111662584 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
111662584 (rfc4)
Chromosome and associated proteins [BR:
slal03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
111662584 (rfc4)
DNA repair and recombination proteins [BR:
slal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
111662584 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
111662584 (rfc4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
AAA_lid_RFC1
Rad17
AAA_assoc_2
AAA_16
AAA_22
AAA_30
AAA_11
Gp44_lid
DUF815
Mg_chelatase
AAA_19
RuvB_N
AAA_28
AAA_24
Cdc6_lid
SLFN-g3_helicase
AAA_14
DNAX_ATPase_lid
ResIII
AAA_5
AAA_7
Motif
Other DBs
NCBI-GeneID:
111662584
NCBI-ProteinID:
XP_023272253
Ensembl:
ENSSLDG00000019380
UniProt:
A0A3B4YQ69
LinkDB
All DBs
Position
Unknown
AA seq
359 aa
AA seq
DB search
MQAFLKGATVHSTRPQKDKAAAGPSTEKKAKAVPWVEKYRPKSVDEVAFQEEVVAVLKKS
LEGADLPNLLFYGPPGTGKTSTILAAARELYGPELFRQRVLELNASDERGIQVVREKVKN
FAQLTVAGTRSDGKPCPPFKIIILDEADSMTAPAQAALRRTMEKESRTTRFCLICNYISR
IIEPLTSRCSKFRFKPLANQIQEQRLLQICDKENLKYTKESIAALVKVSEGDLRKAITFL
QSAARLNSDKEITERAVIEIAGVVPPKMIDNLLQICFKGTFEKLEVAVSNMVDEGYAATQ
ILSQLHESIIEQDLSDKEKSAITEKMAVVGKCLADGADEYLQMLSLCSVIMQQASQNSS
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcctttttgaaaggagcaactgttcactctaccagacctcagaaagacaaggca
gcagcagggcccagtacagagaagaaagccaaggctgttccttgggtagaaaaatacagg
ccaaagtctgttgatgaggtagcctttcaggaggaggtggtagcagtgctgaagaagtct
ctggaaggagcagatcttcccaacttgcttttctatggccctcctggaacaggaaagacc
tccaccatcttagctgctgccagagaactttatggtccagagctgttcagacagagggtg
ctggagctcaacgcctcagatgaacgcggcatccaggttgtcagagagaaggtcaagaac
ttcgctcagctcaccgtggctggaactcgctcagatgggaagccatgtcctccttttaag
atcatcatcctggatgaggcagactctatgacagcaccagctcaggctgcactcagacgg
accatggagaaggaatcccgcaccacccgcttctgcctcatctgtaactacatcagcagg
attattgaacctctgacctccagatgttccaagtttcgcttcaaacctcttgccaatcag
atccaagaacaacgcctgcttcagatctgtgacaaggagaacctcaagtacaccaaagag
agtatagcagcattggtgaaggtgtctgagggagacctgcggaaagccatcaccttcctc
cagagcgctgcgcgcctcaacagcgacaaggagatcacagagcgtgctgtcattgaaata
gccggggttgtccctccaaagatgatcgacaacttgctccagatctgcttcaaaggaaca
tttgagaaactggaggttgcagtcagtaacatggtggatgaaggctacgcagccacacag
atcctgagtcagctccatgagtctatcatagagcaggacctgagtgacaaggagaagtca
gccatcacagagaagatggcggtggtgggtaagtgcctggcagatggtgcagatgagtac
ctgcagatgttgagcctctgttcagtcatcatgcagcaggcctcccagaacagcagctaa
DBGET
integrated database retrieval system
