Seriola lalandi dorsalis (Yellowtail amberjack): 111662774
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Entry
111662774 CDS
T06058
Symbol
ssrp1
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slal03000
]
111662774 (ssrp1)
03036 Chromosome and associated proteins [BR:
slal03036
]
111662774 (ssrp1)
Transcription factors [BR:
slal03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
111662774 (ssrp1)
Chromosome and associated proteins [BR:
slal03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
111662774 (ssrp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_box_2
HMG_WDHD1
SSRP1_C
FERM_C1_MyoVII
Motif
Other DBs
NCBI-GeneID:
111662774
NCBI-ProteinID:
XP_023272511
Ensembl:
ENSSLDG00000001122
LinkDB
All DBs
Position
Unknown
AA seq
704 aa
AA seq
DB search
MGDTLEFNEIYQEVKGSWNDGRLRFSKQNVVYKSSKTGKVDSIPAGELNLAQWRRVCLGH
GIKLGTSTGHIYKYDGFRDTDFERISEFFKANYKVELTEKDMCVKGWNWGTAKFSGPLLS
FDINDNTAFEVPLSNVSQCATGKNEVTLEFHQNDDTEVSLMEVRFYVPPSQADERQDPVE
AFAQNVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDINLTLNMSEEDVERRFE
GKLSKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
AKKLNIKNRGFKEKKGMKGKIDEYSDSDDDQHDAYLERMKAEGKIREEGNDSDESDGGSD
ESFNPGEEDDDIAEEYDSNASASDSSEEGDESEDESAKKKKAKKVSVVKEKKERKPRKEK
KQKDTGGPKRPMSAYMLWLNSSRERIKSENPGISITEISKKAGEMWRQLGKDEKEEWETK
AGEAKRQYDKAKKEYTESGGGSTSKKESKKSGGKKDEKKRKSAGADKDRERGGGNDSFKS
REFIETSEDSSDSDHKSKSKRKKESDDEEEEAVSTPASSEEDSD
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgggagacacattggagttcaacgagatttatcaggaggtgaaaggctcctggaatgac
gggcggctgcgtttcagcaagcaaaatgtggtttataaaagcagcaagacggggaaggtg
gacagcatcccagctggtgaactcaacttggcccagtggagacgagtgtgtctaggtcac
ggtatcaaactgggtactagcacaggacacatctacaaatatgacggcttcagggacacg
gacttcgaaaggatctctgagtttttcaaggctaactacaaggtggagctaacagagaag
gacatgtgtgtgaagggctggaactggggaacagccaagttctcggggccactgttatca
tttgatataaacgacaatacagcattcgaggttccgctatccaacgtctcccagtgtgcc
acagggaagaatgaagttactctggagtttcaccagaatgacgacacagaggtgtccctc
atggaggtcagattctacgtcccacctagccaggctgatgaacgacaagaccctgtcgag
gcgtttgcccagaatgtcttgtctaaggctgacgtgatccaggccacaggagacgcagtg
tgtatcttcaaagagctgcagtgtcttacacccagaggaagatatgacattcgtatctac
ccgacgttccttcacctccatggtaagacctttgactacaagattccctacaccactgtc
ctccgtcttttcctgctgccacacaaggaccagaggcagatgttctttgtgatcagtctg
gatcctcccatcaagcagggtcagacacgttatcactttctgattctgctcttctccaag
gaagaggacatcaacctcaccctcaacatgagcgaggaggatgtggagcgtcgttttgag
ggcaaactcagtaagaacatgtcgggatcgctgtatgagatggtcagcagggtgatgaag
gcactggtcaaccgcaaaatcactgtacccggaaacttccagggtcactctggtgctcag
tgcatcacctgctcctacaaggcatcctcaggcctcctctacccactggagagaggcttc
atctacgtccacaagccgccggtccacctgcgttttgaggagatttcctgtgtcaacttt
gcccgaggcaccaccacaacacgttctttcgactttgagattgagaccaagcagggaaac
cagtacaccttcagcagcattgagagagaagagtacggcaaactgtttgacttcgttaac
gccaagaagctcaacataaagaacagagggttcaaagagaagaagggcatgaagggtaaa
attgacgagtatagcgactccgacgatgaccagcacgatgcctacctggagaggatgaaa
gctgagggcaagatcagggaggagggcaacgacagtgacgaatcagatggtggaagcgat
gaatcgtttaacccgggagaagaagatgatgacattgcagaagagtacgacagcaatgcc
tcagcaagcgacagcagtgaagaaggggatgaaagtgaagatgagagtgcaaagaaaaag
aaggccaagaaagtcagtgtggtgaaggagaaaaaagaaaggaaaccacgcaaagagaag
aagcagaaagataccggcggtccaaagaggccgatgagtgcctacatgctgtggctgaac
tccagccgtgagcgaatcaagtcagagaatccaggcatctccatcacagagatctccaag
aaggccggagagatgtggagacaattgggcaaagacgagaaggaggaatgggaaacaaag
gcaggagaggccaagaggcagtacgacaaagcaaagaaagagtacacagagagcggtggt
ggatcaacctctaagaaggagagtaaaaaatctggaggtaaaaaggatgagaagaagagg
aagtctgccggtgcagacaaagacagggagcgaggaggaggcaatgacagcttcaagagc
cgcgagttcattgagaccagtgaggattcatcagactctgaccacaagagcaagtccaag
aggaagaaggaatcggatgatgaggaggaagaggctgtgtccacacccgctagctcagag
gaagactctgactaa
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