Seriola lalandi dorsalis (Yellowtail amberjack): 111663627
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Entry
111663627 CDS
T06058
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slal04121
]
111663627
Enzymes [BR:
slal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111663627
Ubiquitin system [BR:
slal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
111663627
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
GRASP55_65
Motif
Other DBs
NCBI-GeneID:
111663627
NCBI-ProteinID:
XP_023273660
Ensembl:
ENSSLDG00000012244
UniProt:
A0A3B4XCC5
LinkDB
All DBs
Position
Unknown
AA seq
820 aa
AA seq
DB search
MGCNLCTLQKREEHYKLLYEIAQVNGRDFSKVEHDEAVVEAIRRDPIVVQVLRRTPTRAT
QAVAHNHGGTPQDVCVVDVCTQTDITFEHIMALAKLRPATPPVPDICPFLLSDSCHSIHT
MEHEFYECPEYLSNTPAEVERTEEYEYEEVELCRQNSQEKLGLTLCYRTDDEEDTGIYVS
QVEPNSIAARDGRIKEGDRILQINGCEVQDREKAVALLSSEEARSIILLVTRPEIQLEEE
VWLDDEQQELVEELKMEILEERRKQKERNFDRGDENQAEDEITTDTATCSSNNQDSGFGR
STDSPEHQPLLARLHRRSPAHCLRERWRAEHPHTRRGTAVPQDTQSPRTGSKGQGHEGVV
SIRNSGGGVLGLENRFQQLLELKCQIRNGGECGVYSIRHSIECSLTEQGGGDEDCVESVG
EGGGVEQELRMLNEELRSIELECQSIMQAHQLRQSHQLDPSQPAPCSPGRSPKDGRKRHG
RLADIHEHPERSDSDKIREKDSSSAYNTADSARSTPLGMERSPDHSLQRHISITNQKNLR
LASSTPSSPIPIPKPQGTPSRSRPADPGPVISSSPDQSNPSRSESDPALPADDERCEKKG
RTRESRRGLPYGCSYQTTPYQGQGGSRQLQSYMQLLQQHSSLEYSQSQLSLLSVCRDPVS
RNGRPGEPRLEWKVKVRADGTRYVARRPARDRILRERALRIREERSGGMTTDDDAMSEMK
MGRYWSKEERKQHLARAREQRKRREFMQKSRLECLKEGPASGAEGRKEINILELSHKKMM
KKRNKKILDNWMTIQELMSHGARVPEGSKVHNAFLSVTTV
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatttgtgcaccttgcagaaacgggaggaacactacaaactgctgtatgag
attgcacaggtgaacgggcgcgacttctccaaggtcgaacatgacgaggcagtggtggag
gccatcaggcgagaccccatcgttgtccaggttctccggcgaacccccaccagagccacg
caggctgttgcacataaccacggtggcacgccgcaggatgtgtgcgttgtcgacgtttgc
acgcaaacagacatcacctttgagcacatcatggcactggccaagcttcggcctgctacc
ccacccgtccctgacatctgtcccttccttttgtctgacagctgtcattccatccacacc
atggagcatgagttttatgaatgtccagagtacctgtccaacaccccagcagaggtggag
aggactgaagagtatgagtatgaggaggtggagctgtgcagacagaacagccaggagaag
ctcggcctgacgctgtgctacaggaccgacgatgaggaggacaccggcatctatgtcagc
caggtggagccgaacagtatagcagcgagagatggccgcatcaaggaaggagatcgtatt
ctacagataaatggatgtgaggtgcaagacagagagaaagctgttgccttgttgtcaagt
gaagaagcaaggagcatcatactactggtgacaagaccagaaatccagctggaggaggag
gtatggctggatgacgagcaacaggagcttgtggaggagctgaagatggagatcctggag
gagaggaggaagcagaaagaacgtaactttgacaggggagatgagaatcaagctgaagat
gagatcacaaccgacacggctacctgctcctccaataatcaagacagcgggtttggacgc
agtacagacagtccggagcaccaacccctgctggccagacttcacaggaggagcccggcc
cattgcctgagggagcgatggcgggcagagcatccgcacacaagacgagggactgcagtg
ccacaggacactcagagtccgaggacagggtccaaaggccaaggtcatgagggggtagtc
agtattcgcaatagtggaggtggggtcctcggtttagagaatcgcttccagcaacttctg
gagctcaagtgtcaaatccggaatggaggcgagtgcggggtgtactccatccgacacagt
atagagtgtagcctcactgagcagggaggaggggatgaagattgtgtggaaagtgtggga
gaagggggaggggtggagcaggagttgaggatgctaaatgaggaactgcgcagcattgag
ctggagtgtcagagcatcatgcaggcgcaccagctccgccagagccaccagctggacccc
tcacagcccgcaccctgctcaccaggacggagccccaaagacggacgcaagcggcacggc
aggctggccgacatccacgaacacccggagaggtcggacagcgataagatcagagagaag
gacagctccagtgcctacaacacagcggacagcgcgcggtcaacaccgctgggtatggag
agatctcctgaccactctctgcagagacatatcagcatcaccaaccagaaaaacctcaga
ctggcgtcttccacaccctccagccccatccctatccccaagccccagggtacacccagt
cgtagcagaccagcagacccaggccccgttatctccagcagcccagaccagagcaaccct
tccaggtctgagtcagaccccgccctgcccgcagacgatgagaggtgtgagaagaaaggg
aggacaagagagtccaggagagggcttccctatgggtgttcatatcaaacaaccccctat
caaggccaaggaggatcaaggcaactgcagagctacatgcagctgctacaacagcactca
tccctggagtattcccagagccagctgagcctgctcagcgtctgtcgagatcctgtgagc
cgaaacggacgccctggggaaccccgtctagagtggaaagtcaaagtccgcgctgacggc
acgcggtacgtggcccgaaggcctgctcgtgaccgcatcctgagggagagggcgctgagg
atccgagaggagaggagcggaggcatgaccacagacgatgacgccatgagtgagatgaag
atgggccgctattggagcaaagaggagaggaagcagcatttggcgcgagccagggagcag
aggaagaggagggagttcatgcaaaagagccgcctcgagtgtttaaaggagggaccagcc
agcggagccgagggcaggaaggagatcaatatcttagagctgagtcacaaaaagatgatg
aagaaacgcaacaaaaagatccttgacaactggatgaccatccaggagttgatgagccat
ggggccagagtcccagaggggtctaaagtacacaacgccttcctgtctgtcacaactgtc
taa
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integrated database retrieval system
