Seriola lalandi dorsalis (Yellowtail amberjack): 111663940
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Entry
111663940 CDS
T06058
Name
(RefSeq) protocadherin-1-like
KO
K16498
protocadherin delta 1
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
111663940
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
slal01009
]
111663940
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
slal04515
]
111663940
Protein phosphatases and associated proteins [BR:
slal01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111663940
Cell adhesion molecules [BR:
slal04515
]
Cadherins
Protocadherins
111663940
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
He_PIG
RET_CLD1
Syndecan
Motif
Other DBs
NCBI-GeneID:
111663940
NCBI-ProteinID:
XP_023274115
Ensembl:
ENSSLDG00000017748
LinkDB
All DBs
Position
Unknown
AA seq
1190 aa
AA seq
DB search
MELNLLVVLFWVLVLRCGSAEGSILYRVQEEQPPNTLIGSLAADQGLPDSGHLYKLEVGA
PYLRVDGKTGDIFTTEIPIDRETLRDCRSLAKGKPCYLEFEVSVTDLIQNQSPRLIEGRI
EVQDINDNTPQFPSSVLTISVPENTIMGALFSIPLATDRDSDRNGVADYALTAGPEAATL
FGLQVADDRGGKLPQLIVLGNLDRELKDSYDLTIKAVDGGNPQRYSSALLRVVVTDANDN
SPKFEKSTYEAEVSENSPVGHSVLQVKANDSDMGPNGEIEYTLHQAVDPVPKLLRIDRST
GIIYVKGSLDREEISSLSFYVMAKDKGPQPKSSKTFVTIEVTDQNDNAPAVEIRGIGLVT
HSEGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPASDSSSDNKRKY
FLQTTTPLDYERVKEYRVEIVAVDSGNPALSSTNSLKVQVTDVNDNSPIFSPTLFEVDFA
EENQPGEKVLDVTASDADSGTNAELLYSIVADSSIKGLFEIDPNTGEVRARSPLDREHKE
RYEFRVTAADKGSPVHKGTATVVVKVLDRNDNDPKFMLSGYSFSVLENMPPLSPVGMVTV
LDVDKGENARVHLSVEPDGGKFVVQNGTGTILSSISFDREKESSYTFRLKAVDRGEPPRS
SYVGVTINVLDENDNDPVVTKPSNSSFRHLSPLASPDSHVEVVEAEDLDSGPNAELVFSI
AGGNPYQLFRISPSSGEITLAKEMTRKHGGLHRLVVRVSDRGKPARHATALVHIYVNETI
SNVSLVEALVGHSLYTPLDRDIAGDPDNGFAAQRSNILFGSLAGVAGVVMLILVVVFIRH
RIQRETKSGYQAGKKETKDLYAPKQAPKNAKGKRGRKGKPQKSPKPLGEEEEVSLQKSLK
FNLDGVNDSPRIHLPLTYSPGSPDIGRHYRSNSPLPSIQLQAQSPSASQKHQAVQDLPAA
NTFVGTGGDDNSTGSDQYSDYSYKTSQPKYNNKQHPHRRVTFSTTNPVQDLQDASQHSYY
DSGLEESETPSSKSSSGPRIGPLTLPEDHYERTTPDGSIGETEHPENDIRSLPDVAMTGN
CTTECSELGHSDACWMPGHPSPVRKTRNPPKLSTFVPYQERGSLGRLANGSVRLGGEEHR
SRLPPSRSAYSSSGHDASQDCPLEEMPLSVASEFPPTSPSAHTPKREIYL
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaacttacttgtagtgctgttttgggtcctggtgctgcgctgtggctctgct
gaaggcagtatcctgtaccgggtccaggaggagcagccccccaacactctgattggtagc
ctggcagcagaccagggactgccagactcgggtcacctctacaagctggaggtgggtgcc
ccttacctccgtgtcgatggaaagacgggagacattttcacaacggagattcccatagac
agagagaccctgagggactgtcgatccctggctaagggtaagccctgctacctggagttt
gaagtgtcagtgacagatctgatacaaaatcagagcccacgtcttatcgaaggacgcatt
gaggtgcaggacatcaatgataacaccccacagtttccctcttctgtgctcaccatctct
gtcccagagaacacgatcatgggggcgctattctccatacctttagctacagacagggac
tcggacaggaatggagttgctgactatgcactgaccgcaggcccagaagcagcaaccctg
tttggtttacaagtggctgatgacaggggtgggaaactcccacagctgattgtcctaggc
aacctagatcgtgagttaaaggattcctatgacctcaccatcaaggcagtggatggagga
aaccctcagcgctacagcagtgctttgcttagagtcgtagtcaccgacgccaatgataac
tctcccaaatttgaaaagtccacgtacgaggccgaagtttcggaaaatagtccagtgggc
cactctgtgttgcaggtcaaagcaaatgactctgacatgggccctaatggagaaattgag
tacacccttcaccaagcagtggaccctgtgccgaaactcttacgaattgaccggtctact
ggtattatctatgtcaaaggatccctggacagggaggaaatcagcagcctgtccttctat
gtgatggcaaaagataaaggtcctcagcctaaaagctctaagacatttgtaaccattgag
gtgactgaccaaaatgacaatgctccagctgtggagattcgtgggatcggtctcgtgaca
cacagtgagggagtggctaacatttcagaggacatgccagtgggaacagctgtagctttg
gtgcaagtgtctgacaaggatgagggagagaatgctgtggtgacctgtgtggttgcagga
gatgtgcccttccagctacgccctgccagcgactcatccagtgacaacaagaggaagtat
tttctacagaccaccactcctctcgactacgaaagggttaaggagtaccgagtggagatt
gtggctgtggattctggaaatccagcactctctagtacaaattcattgaaggttcaggtg
actgatgtgaatgacaattctccgatattctccccaaccttgtttgaggtagattttgcc
gaagaaaaccaaccaggggagaaggttttggatgttacagcttcggatgctgacagtggc
actaacgcagaactcctttatagcattgtggcagactcatctatcaaaggtctgtttgag
attgacccaaatacaggtgaagtaagagcccgaagcccgcttgatcgtgagcataaagag
cgttatgagttccgggtcacagcggcagataaagggtcacctgttcataaaggaacagca
accgttgtagtaaaagtccttgaccgcaatgacaatgaccccaagttcatgcttagtggc
tacagcttttcagtgttggaaaacatgcctcccctcagtccagttggtatggtaacagtc
cttgatgtagacaaaggtgagaatgctcgtgttcacctctctgtcgagcctgatggaggg
aagtttgttgttcaaaatggaacgggcaccatcctctcaagcatctcatttgacagggag
aaagaaagcagctacactttccgtctgaaagcagtggatagaggagagccaccaaggtct
tcatatgtgggtgttactatcaatgtactggatgaaaatgacaatgaccctgtggtcacc
aagccctccaattcctccttcaggcacctgtcacctctggcttccccagacagccatgtg
gaggtagtggaagctgaagatttggacagtgggcctaatgcagagctggtcttcagtatt
gctggtgggaacccttaccagttatttcgcatctccccttccagtggggagatcacttta
gctaaggagatgacccgaaaacacggtggactacatcgcctagtggtgcgagtgagtgat
aggggtaagcctgcacgtcatgccactgccctggtccacatctatgtcaatgaaaccatt
tcaaatgtcagcttagtggaagccctagttggacacagtctttacactccattggacaga
gacattgctggtgatcctgacaatggttttgctgcacagcgtagtaacattttgtttgga
agccttgccggtgtggcaggtgtcgtcatgttaatcttggtggtggtattcattcgacac
cgcatccagagagaaactaagagtggttatcaggccggcaaaaaggagacaaaggactta
tacgcacccaaacaggcaccaaagaatgccaaaggcaaacgaggaaggaaaggcaaaccc
cagaagtcccccaaacccctcggggaagaggaagaggtcagccttcaaaagagtctcaaa
ttcaacctcgatggagtcaatgatagccccaggatacacctgcccttaacctattcacca
ggaagccctgatataggcaggcactaccgctccaactcccccctaccctccatccagctg
caggctcaatccccttccgcctcacagaagcatcaagccgtccaggacctccctgctgcc
aacacctttgtaggaacaggaggagacgacaactctaccggctcagaccagtactcagat
tacagctacaagactagccaaccgaagtacaacaacaaacagcatccccatcggcgagtg
accttctccaccactaaccctgtgcaggacctgcaggatgcctctcagcacagctactat
gacagcggtttggaggaatctgagactcccagcagcaagtcatcgtctggtcctcgcatc
ggacccctgaccctgcctgaggaccactatgagagaaccactccagatggcagcattgga
gagaccgaacacccggaaaacgatatccgctccctccctgatgtggcaatgaccggaaac
tgtacgacagagtgcagcgaattgggccactcagacgcctgctggatgcccgggcatccc
tcccctgtacgcaagaccaggaaccccccgaaactctccaccttcgtgccttaccaggag
agagggagcctgggacgcctggcaaacgggagcgtcaggctgggtggtgaggagcaccga
tcgcgccttccgccctcccgcagtgcctattccagcagtggtcacgacgccagtcaggac
tgccccttagaggagatgcccctgagcgtggcctctgagttcccacccacctccccctct
gcccacactccaaaaagagaaatttacctgtga
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integrated database retrieval system
