KEGG   Seriola lalandi dorsalis (Yellowtail amberjack): 111664005
Entry
111664005         CDS       T06058                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
slal  Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:slal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:slal03041]
    111664005
Spliceosome [BR:slal03041]
 Complex B
  Other components
   Complex B specific factors
    111664005
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EML Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th NBCH_WD40 LisH_TPL WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_Nup120_160 Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_NWD2_C Ge1_WD40 Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_SCAP WD40_RFWD3 Beta-prop_VPS8 Beta-prop_WDR75_2nd Beta-prop_WDR35_TULP_N Beta-prop_IP5PC_F Mala_s_1-like TFIIIC_delta Cytochrom_D1 Beta-prop_WDR11_2nd PD40 DUF7165 VPS8_N
Other DBs
NCBI-GeneID: 111664005
NCBI-ProteinID: XP_023274204
Ensembl: ENSSLDG00000004975
LinkDB
Position
Unknown
AA seq 511 aa
MAVEMEPSDVIRLIMQYLKENNLYRTLTTLQEETTVSLNTVESIDSFIADIKSGHWDCVL
LAIESLKLPDNTLIDLYEQVVMELIEMREVGAARSLLRQTDPMIMLKQTQPERYIHLENL
LTCSYFDPREAYPKGSSKEKRRRAIAEALVREVSVVPPSRLMGLLEQVGSMRLQQYPGHL
SPDMPIDTSGNKERHVEKESFPTQLYRHIKFGRRSHVECARFSPDGKYLITGSVDGFIEV
WNFYTGKISKDLKYQAQDSFMMMDDAVLCMCFSQDTDLLATGAQNGKIKVWKIQSGLCLR
RFEHAHSKGVTCLSFSKDNNQILSASFDQTIRIHELRSGKTLKELNGHSSFVNDASFTQD
GFHIISASSDGTVKIWNTKTCECIHTFKSLSRTSEIPVNNVIPLPQNPEHFVVCNHSNKV
VIMSMRGQTVKTFSSDRKEGTDFVCCTLSPHGEWIYCVGEDLVLYCFNYTTGRLEKTLTV
HEKDVIGIAHHPHENLIATYSEDGLLRLWKP
NT seq 1536 nt   +upstreamnt  +downstreamnt
atggctgtggagatggagccctcggatgtgatccgcctgataatgcagtatcttaaggag
aacaacctctaccgaacactgaccaccttacaggaggaaaccaccgtctcactcaacacg
gtggaaagtatcgacagtttcattgcagatataaaaagtggccactgggactgtgtcctg
ctggctatcgagtccctcaagttgcccgacaacacacttattgacctttatgagcaggtt
gtaatggagctcattgaaatgagagaggtgggtgcagctcgctcactcctcagacaaact
gacccgatgatcatgttgaagcagactcagccggagaggtacatccacctggagaacctg
ctaacatgctcctactttgacccccgtgaggcgtacccgaaaggcagcagcaaggagaag
cgacgcagggcaatagctgaggcactggtgagggaagtcagtgtggtgcctccttctcgc
ctcatggggctcctggaacaagtcggctctatgagactacagcagtacccgggtcacctc
tcgccggacatgcccatcgacacatctggcaacaaggagagacatgtggagaaagagagc
ttcccaacccagctgtaccgccacatcaagtttgggcgacggtcacatgtagagtgtgcc
cgtttctcccctgatggaaagtacctaatcaccggatcagtggatgggttcatcgaggtc
tggaacttctacactggaaaaattagtaaagatttaaagtaccaggcccaagatagcttc
atgatgatggatgatgctgtgctgtgtatgtgcttcagtcaggacactgatctactagca
actggagctcagaatggcaaaataaaggtgtggaagatccagagtggcttgtgcctgcgc
aggtttgagcacgctcacagcaaaggtgtgacctgtctgagcttctccaaggacaacaac
cagatcctcagtgcgtcctttgaccagaccatcagaatccacgaactgaggtcaggcaag
acactaaaggagttaaatggccattcatcgtttgtaaatgatgcatctttcactcaagat
ggatttcacatcatcagtgcctcatctgatggcactgtcaagatttggaacacaaagact
tgcgaatgcatccacacgttcaaatcactgtcccggacatcagagatccctgtcaacaat
gtgatccctctaccacaaaacccagagcactttgtggtttgtaaccactccaacaaagtg
gtcatcatgagcatgcgtggtcagactgtgaagaccttcagttcagatagaaaggaagga
acagactttgtgtgttgcaccctgtcaccccatggggagtggatttattgtgtgggagag
gacttagtgctgtactgcttcaactacacgacgggaaggctggagaaaacgctgaccgtc
cacgagaaagacgtcattggaatcgctcaccatccacatgagaatctgatagccacatac
agcgaggacggcctcctacggctatggaaaccttaa

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