Seriola lalandi dorsalis (Yellowtail amberjack): 111664036
Help
Entry
111664036 CDS
T06058
Symbol
dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111664036 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slal03041
]
111664036 (dhx15)
03009 Ribosome biogenesis [BR:
slal03009
]
111664036 (dhx15)
Enzymes [BR:
slal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111664036 (dhx15)
Spliceosome [BR:
slal03041
]
Complex A
U2 snRNP components
U2 related factors
111664036 (dhx15)
Complex B
111664036 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
111664036 (dhx15)
Ribosome biogenesis [BR:
slal03009
]
Eukaryotic type
90S particles
Helicases
111664036 (dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
AAA_25
SRP54
Flavi_DEAD
nSTAND3
Atrophin-1
AAA_29
AAA_7
Motif
Other DBs
NCBI-GeneID:
111664036
NCBI-ProteinID:
XP_023274248
Ensembl:
ENSSLDG00000005338
LinkDB
All DBs
Position
Unknown
AA seq
762 aa
AA seq
DB search
MSKRHRLDLGDDYSSSKKRSDGRDRDRDRDREDRSRDRDRDRDRDRDRDRDRDPKPSSAP
VNSTAAGPVLPPIKQMVVHQQINPFTNLPHTPRYYEILKKRLQLPVWEYKESFSDIITRH
QSFVLVGETGSGKTTQIPQWCVDMVRGLPGPKRAVACTQPRRVAAMSVAQRVADEMDVML
GQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILM
GVLKEVVRQRPDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLE
AAIRTVIQIHMCEEDEGDCLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLP
PQQQQRIFEPPPPRKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRV
ESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQ
LKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAK
MVIASCEFNCSNEILSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDGDHLTLLNVYHA
FKQNHESNQWCYDNFVNYRSLMSADNVRQQLSRIMDRFNLPRRSTEFTSRDYYINIRRAL
CTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDI
KPEWLVKIAPQYYEMSNFPQCEAKRQLERIIAKLESKEYSQY
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaagacatcgcctggatttgggtgatgactactcctccagtaagaagaggtct
gatgggagagaccgtgaccgtgacagagaccgcgaggaccgctccagggacagggaccga
gatagggatcgggaccgggacagagaccgggacagagacccgaagccttctagtgcgcca
gttaacagcacggcagccgggccagtcttaccacccatcaagcaaatggttgtgcaccag
cagatcaatccattcaccaacctaccgcacacaccgcgttactacgagatcctgaagaag
aggttacagcttccagtgtgggagtacaaggaaagcttcagcgatatcatcacacgtcat
cagagctttgtgcttgtcggagagactggttctgggaagacgacacagatcccacagtgg
tgtgtggacatggtgagaggtttgcctggtcccaagcgagcggtggcctgtactcagccc
aggagagtggcagccatgagtgtggctcaaagagtggcagatgaaatggacgtcatgctc
ggacaggaagtcggttactccatccgatttgaggactgtagctctgccaagactatattg
aagtacatgactgacggtatgttactaagagaggcaatgaatgacccactgctggagcga
tatggtgtgatcattctggacgaggcccacgagcgaactctggccacagatatcctgatg
ggagtactgaaggaggtggtgcgtcaaagaccagatctgaaggtgatcgtcatgagtgcc
acactcgacgctgggaagttccagatctacttcgacaactgtcccctgctgactattcct
ggtcgtacacaccctgtggagatcttctacacccctgagcccgagcgagactaccttgag
gcagcgatccgcactgtcatccagattcatatgtgtgaggaagatgaaggtgactgctta
ctcttcctcactggtcaagaggaaattgatgaagcctgcaaacggatcaagcgtgaggta
gatgaccttggacccgaagttggagacatcaaaatcattccactgtattccacgttgccg
ccgcagcagcagcaaaggatctttgagcctcctcctccaaggaaacccaacggtgcaata
ggaagaaaggtcgtggtgtcgacaaacattgctgagacttctctaacaattgatggtgtg
gtgtttgtcattgatcctggatttgctaaacaaaaggtgtacaatcctcgtattagggtt
gagtctttgctcgtcacggccatcagtaaagcttctgcccagcagagggcaggacgagct
ggcagaacacgtccaggaaaatgcttccgcctctacacagagaaggcctacaaaacagag
atgcaggataacacataccctgagattcttcgatccaacttgggatctgttgtgctgcag
ctgaaaaagcttggtattgacgacttggtgcactttgacttcatggatccacctgctcca
gaaacactgatgagggcccttgaactgctgaattacctcgcagctctcaacgatgacggt
gacctgacggagctgggctccatgatggctgagtttcccctggacccccagctggctaag
atggtcattgccagctgcgagtttaactgctctaatgagatcctttccattactgccatg
ctgtcagtcccacagtgttttgtccgccccacggaggctaagaaggcagcagacgagtcc
aagatgaggtttgctcacatcgacggagaccacttgacgctgctcaacgtctaccacgcc
ttcaaacaaaaccacgagtctaaccagtggtgctatgacaactttgtcaactaccgttca
ctgatgtctgctgacaatgtgcggcagcagctgtccaggatcatggaccgcttcaacctg
ccccgtcggagcacagagttcaccagcagagattactacatcaacatccgaagggcgctc
tgcactgggttcttcatgcaggtggctcatttggagcgcacaggtcattacctcacagtg
aaagacaaccaagtggtccaactccacccatctacagtcctggaccacaagcccgagtgg
gtgctctacaatgaatttgtcctcaccaccaagaactacatccgcacttgcacagacatc
aagccagagtggctggtgaagattgcaccccagtactatgaaatgagtaacttcccacaa
tgtgaagctaaaagacagctggaacgaatcattgccaaactagagagcaaggagtattcc
cagtactga
DBGET
integrated database retrieval system
