KEGG   Seriola lalandi dorsalis (Yellowtail amberjack): 111664047
Entry
111664047         CDS       T06058                                 
Symbol
aptx
Name
(RefSeq) aprataxin isoform X1
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
slal  Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:slal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    111664047 (aptx)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:slal03400]
    111664047 (aptx)
Enzymes [BR:slal01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     111664047 (aptx)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     111664047 (aptx)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     111664047 (aptx)
DNA repair and recombination proteins [BR:slal03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     111664047 (aptx)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     111664047 (aptx)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT zf-C2H2_6 FHA zf-C2H2_4
Other DBs
NCBI-GeneID: 111664047
NCBI-ProteinID: XP_023274264
Ensembl: ENSSLDG00000004915
UniProt: A0A3B4WTF0
LinkDB
Position
Unknown
AA seq 333 aa
MPICWLISEEGNHKPIQLPHLQTVVLGRGPETTIKDKKCSRQQVELRAECNKGYVKVKQL
GVNPTSIDSAVVGTGNEVKMKPGQQLHIVNQLYPYTVQFKEDLTGNHGGTKRPRESVSED
RESQREAQKMKAAKQTEKVSVSLSHGEATKTNETFGHWSQGLKISMQDPKMQVYKDEKVV
VIKDKYPKSRYHWLVLPWQSIPSLKALREEHCDLVKHMQQVADQMIEQCPDASSLHFRTG
YHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFTTDYFIESHDVIEMLDTNGRVTVKEGA
NELLKLPLRCHMCRKELPTIPALKDHLKSHFPR
NT seq 1002 nt   +upstreamnt  +downstreamnt
atgcctatttgctggcttattagcgaggaaggcaatcataaacctattcagctgccccac
ttacagacagttgtcctgggtcgaggtccagaaacgactattaaagacaaaaagtgctcc
cggcagcaagttgaattgagagcagaatgcaacaaaggttatgtcaaagttaaacagctg
ggtgtgaaccccacctctatagactctgcagttgtgggtacaggcaatgaagtcaaaatg
aagcctggacagcagcttcatattgtcaaccagctctatccatacactgtacagttcaag
gaggatctgactggcaaccacggtggcaccaaaagaccaagggagtcagtttcagaggac
agagagagccagagagaggctcagaaaatgaaagcagccaaacagacagaaaaggtctca
gtatcactcagccatggagaagccacaaaaaccaatgaaacttttggacattggagccaa
ggtctgaagatttcaatgcaagacccaaagatgcaggtatacaaggatgagaaagtcgta
gtaattaaagataaataccccaaatctcgttaccactggctggtcctcccgtggcagtcc
attcccagtctgaaagctttgcgtgaggagcactgcgacctggtgaaacacatgcagcaa
gttgctgaccagatgattgagcagtgccccgacgctagttcattacatttccgcacaggg
taccatgccatcccaagtatgagtcatgttcatctccatgtgatcagccaggactttgac
tctccttgtttgaagaacaaaaagcactggaactcgttcacaactgactatttcattgag
tctcatgatgtcattgagatgcttgacacaaatggaagggtcactgtgaaagaaggcgcc
aatgagttgttgaaactacctctccgctgtcacatgtgtcgcaaagaacttcccactata
ccagctctgaaggatcacctgaagtctcactttcccagataa

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