Seriola lalandi dorsalis (Yellowtail amberjack): 111664102
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Entry
111664102 CDS
T06058
Name
(RefSeq) zinc finger CCHC domain-containing protein 7-like
KO
K12597
protein AIR1/2
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111664102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slal03019
]
111664102
03016 Transfer RNA biogenesis [BR:
slal03016
]
111664102
Messenger RNA biogenesis [BR:
slal03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
111664102
Transfer RNA biogenesis [BR:
slal03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
111664102
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_2
Zn_ribbon_2
Motif
Other DBs
NCBI-GeneID:
111664102
NCBI-ProteinID:
XP_023274341
Ensembl:
ENSSLDG00000001166
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MYCTYQDREELEDDLYHEDDRDSEGSEANSELEFRLYSQLHYSSNAGEMEEQEGTGEKAE
GQDSRQPEVTEETADANGELEHTGESGPPSPNISKLLQHLKKKKKKKEGEKSDNQKKGKR
DPKGQRSSSLFEEVIVIDSGPDVISISDDDTADDEGVCALKGQGSHRLLTSTPAHQADQK
RKSSLSVPVTVDSSSSESDSEESESRSESESDSSDSSDSPDSDCLENWMILGPGNQEGDQ
SISLNLEGGSDSNADAEEEEERSWVVSDKDREAQIYNKDKGARIVLPRVSNRYYTGKNVQ
CRNCNKTGHLSKTCPEPKKLLPCFLCGTPGHVVSECPNKHCNNCGLPGHLFGSCSERAYW
HKQCHRCSMTGHFFDACPQIWRQYHITTKTGPPVKQHRQDNGRSPAYCYNCSRKGHFGHV
CTRQKMFNGVFASIPFINHYDTVEDIKRRQHRLKLKVKELKKNGFFPTTSQTPVTPGPPK
KKQKIIHHKNNHQPNQTPHHTPKNHKPSPSHIFFSVDDFRSTTPKTSKFNKHKQQESTGS
VKQWKAKRPVPTSRGPLPPSKLILDEADDFPRGGGKGEKLEKKRKKNRMKKTMELPPEGH
RGSRSHRPCWTVTGGMQGSESRQENGEKKTRKRRNRDRRTADKKLSAPMYPTDENLFIIK
QRKRNR
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgtactgtacctatcaagaccgtgaggagttggaggatgatctctaccatgaggatgac
agagactctgaggggtcagaggccaacagcgagctggagttccgcctctatagccagctc
cactactcctctaatgctggggagatggaggagcaggagggcacaggtgagaaggcggag
ggccaggacagccggcagccagaagtgactgaggagactgcagacgccaacggagagctg
gagcacactggagaaagtgggccaccgtcacctaatataagcaagctactacaacacctg
aagaagaagaagaagaagaaggaaggagagaaaagtgataaccagaagaaggggaaacgt
gatcctaaaggtcagaggtcgtcatcactttttgaggaggtcatcgtgattgactccggc
cctgatgtcatctccatctctgacgatgacactgccgatgatgaaggggtctgtgcctta
aagggtcaaggctcacaccggctgctgacttccaccccagcacatcaggcagaccagaag
aggaagagcagtctcagtgtgccggtgactgtggattccagcagctcagaatcggattcg
gaagagtctgaatccagatctgagtctgagtctgattcttcggattcttctgattcacct
gattcggactgtctagagaactggatgatactgggtccagggaaccaggaaggagaccaa
tccatctcactcaatctggaaggagggtctgacagcaatgcagatgctgaagaagaagaa
gagaggagctgggtggtttctgacaaagacagagaggctcagatatataacaaagacaag
ggtgccaggatagtgctcccgcgggtgtcaaacagatactacactggcaagaatgtccag
tgtagaaactgcaacaagaccggacatctctccaagacctgccccgagcccaaaaagttg
ttgccctgcttcctttgcggcaccccaggccacgtggtcagtgaatgtcccaataagcac
tgcaacaactgtggcctgcccggtcacctgtttgggtcttgcagcgagagagcgtactgg
cacaaacagtgtcatcgctgcagcatgacgggacacttctttgacgcttgtccacagatc
tggagacagtaccacatcacaactaagacagggcctcctgtgaagcagcacagacaggac
aacggtcgatctcctgcctactgctacaactgctccaggaaaggacactttggccatgtc
tgtacaaggcagaagatgttcaatggggtgtttgccagcatcccgttcatcaaccactac
gacactgtggaggacatcaagcgcagacagcacaggttgaagctgaaggttaaagaactg
aagaaaaacggctttttccccaccacctcccagacccctgtcactccaggaccaccaaag
aagaaacagaaaatcatccatcataagaacaaccatcaacctaaccaaacacctcaccac
acccctaagaaccacaaacccagtcccagccatatcttctttagtgtcgatgactttagg
agcacaacacccaaaacaagtaagttcaataagcacaaacaacaggaaagcactggcagt
gtgaaacagtggaaagccaagagaccagttcccacctcgagaggcccgctcccaccatct
aaactaattttggatgaggcggatgactttcctagaggaggaggcaaaggagaaaaatta
gagaagaagaggaagaagaatagaatgaagaaaacaatggaactaccaccagagggacac
agaggcagcagatcacaccgtccctgttggactgtaactggcgggatgcaggggtcagag
tctaggcaagagaatggagagaagaagacgaggaagaggagaaatcgagaccggaggact
gctgacaaaaaactctctgcaccaatgtacccaacggatgagaacctgttcatcatcaaa
cagaggaaacgcaacagatag
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