Seriola lalandi dorsalis (Yellowtail amberjack): 111664189
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Entry
111664189 CDS
T06058
Symbol
seh1l
Name
(RefSeq) nucleoporin SEH1
KO
K14299
nucleoporin SEH1
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03013
Nucleocytoplasmic transport
slal04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111664189 (seh1l)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
111664189 (seh1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slal03019
]
111664189 (seh1l)
04131 Membrane trafficking [BR:
slal04131
]
111664189 (seh1l)
Messenger RNA biogenesis [BR:
slal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111664189 (seh1l)
Membrane trafficking [BR:
slal04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
111664189 (seh1l)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
EIF3I
WDR55
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
111664189
NCBI-ProteinID:
XP_023274459
Ensembl:
ENSSLDG00000011462
UniProt:
A0A3B4XE45
LinkDB
All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
MFVARSIAADHKDLIHDVSYDFHGRRMATCSSDQSVKVWDKSENGEWHCTASWKTHSGSV
WRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKQRGLSHWIKRTTLVDSRTSVTDVK
FAPKHMGLMLTTCSADGVVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHPP
MFAVGSDDNNVTYGGKVQIYEYNENTRKYAKAETLMTVTDAVHDIAFAPNLGRSFHVLAI
ATKDVRIFKLVPMRKESASTGPTKFEVQIMAQFDNHNSQVWRVSWNITSTLLASSGDDGC
VRLWKANYMDNWKCTGILKGDGSPLTSSSGQPTAMSTVVGSSVQTSQNALNGMSAGRYFF
PPLDPPRAGTRYGHLLPPSSLIEHCDAEPIQPQQQALPHRHSSRALLPLPEAEGQ
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtagcgcggagtatcgcagcagatcataaagatctaatacacgatgtgtcgtat
gatttccacggccggcgaatggcaacttgctccagtgaccaaagcgtcaaggtttgggac
aaaagtgaaaatggagagtggcactgcacggccagctggaagacacacagcgggtcagtg
tggagagtgacctgggctcatccagagtttgggcaggttctagcttcctgctccttcgac
aggacagctgctgtctgggaagagattgtaggggagtcaaatgacaaacagagaggactg
agccactggataaaaagaaccacattagtagacagtagaacttcagtgactgatgtgaag
tttgcccctaaacacatgggcctgatgttgaccacctgctctgcggacggagtggtgagg
atttacgaggctcctgatgttatgaacctgagtcagtggtccctgcagcacgagatctcc
tgcaagctcagctgcagctgcatctcgtggaatccctccagctctcgtgcccacccgccg
atgtttgcagtggggagtgacgacaacaatgtaacatatggtggcaaagttcagatctat
gagtacaatgaaaatacaaggaaatatgctaaagcagagacgctgatgaccgtcactgat
gcggtccatgacattgcatttgctccaaacctggggagatctttccacgtccttgccatt
gcaacaaaagacgtccgaatctttaagcttgttccaatgaggaaggagagcgcctctaca
ggacccaccaagtttgaggtgcagatcatggctcagtttgacaaccataactcccaggtg
tggcgtgtgagctggaacatcaccagcaccctgctggcctcctccggggatgacggctgt
gtgcgcctatggaaagccaactacatggacaactggaagtgcaccggcatcttgaaggga
gacggcagcccactcaccagctcatccggtcagcccacagccatgagcaccgtggtgggc
tcctctgttcagacctcccagaatgcactgaatgggatgtctgcaggaaggtatttcttt
ccacctctggatcctcccagagcggggaccaggtatggtcacctgctgcctccctcctcc
ctcatagagcactgtgatgctgagcccattcagcctcaacaacaggctcttccccacaga
cactcctctagagcactgctgcccttaccagaggctgaaggacagtaa
DBGET
integrated database retrieval system
