Seriola lalandi dorsalis (Yellowtail amberjack): 111664556
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Entry
111664556 CDS
T06058
Name
(RefSeq) protocadherin-7-like
KO
K16498
protocadherin delta 1
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
111664556
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
slal01009
]
111664556
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
slal04515
]
111664556
Protein phosphatases and associated proteins [BR:
slal01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111664556
Cell adhesion molecules [BR:
slal04515
]
Cadherins
Protocadherins
111664556
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
111664556
NCBI-ProteinID:
XP_023274979
Ensembl:
ENSSLDG00000024689
UniProt:
A0A3B4YUS4
LinkDB
All DBs
Position
Unknown
AA seq
1375 aa
AA seq
DB search
MLRLGAVHSSAAQALSLVVLVLQLLTQPPGADSALRYRVAEEGPPDVKIGNVAADLGLTA
GTGSGDVTFALESGSEYFKIDNVTGELTTGPRRIDREKLPQCQMIFDENECFLDFEVSVI
GPLQSWVDLFEGRVVITDINDNTPSFPSPVLQLSVEENRPIGTLYLLPTATDRDFGRNGI
DRYELIQDGGAGSSSTRRTAGGNPITRVDGLGDRRGRSGDNGAGARSTVFELQVADIPDG
EKQPQLIVKGTLDREQKDSYELVLRVRDGGNPPRSSQALLRVSITDVNDNSPQFERSTYE
AEMAENAPPGTPVLQVRASDRDIGVNGQVEYVFGAATESVRRLLRLDEATGWLSVLHRID
REEVAQLRFTVMARDRGQPPRTDRTTVVLAVRDENDNVPVVEIRKIGRIPVRDGAALVPE
NVLVDTPVALVQVSDRDQGENGAVTCTVVGDVPFTLKPAGETALPPLPADEAFDRNKKKY
FLHTSALLDYEATKEYSVTIVAVDSGSPSLSSNSSLMVRVVDINDHAPTFAQSVVEVHFA
ENNSPRERVVTVVATDADSGKNAEIAYSLDPAGNGPFYIDADNGDIRATGVLDREQRERY
ELRVIAKDKGTPSLQGSATVVVQVTDRNDNAPKFVQEIFTFYVKENLLANSPVGMVTVTD
ADEGENAELSLFVEMDGVEEKKAGEKVEGEDGEKEQGEEVFSIENNTGTIFSSASFDREK
LSTYTFRVRAVDGGEPRKTATATVSLFVTDENDNAPSITSPTNESYTLLPPASSARTVVQ
TVTAIDSDTGPNADLRYALVGGNPFRLFEIGHTNGVITLAEPLERRHRGLHRLVIRVNDS
GIPSLCATALVHVFINESVANATLVDAQVARSLMAPLSLDIAGDPDSERALGKQRLSVAI
GVLAGAAAVILVILLVVTARQCGAQGKNGYEAGKKEPEEDFFSPPGAQPQAGRGGGSDRG
RKPRRDKRNGSGGSAAAGGGKSDRSLYSGIVTVNGLRRHANDDDEEDLSSASERLAARYC
AVDGDPGSPRMGGGRRHQSSPDLARHYKSSSPLPAVNLQPHSPPAEGKKHQAVQELPPSN
TFVGSGGCVGSAGSSSSSSGGSGNADAMSLGSDQCSEYGCQTGNKYSKQGTLRRVTFSVV
SQPQDAGCYDSGMEDSETPSSKSSSGPRLGALPLPEEGYERTTPEGSVGEEEHVENDARQ
LPDVALTGKCTRECDEFGHSDTCWMPVRPSPRQRQRHGSDPPRLSTFAPGDNNNNLRGND
HESDSESAGSAGSSEPGVVVGGEAPRFPLANGDPLGTLGSGDRNRNMGDHNRNLLNRKMT
SASYDTFSSAGFGRRQQEEEGGEGQNPPEVIPLTRTGGDYKTTSCLTLSRREVYL
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggcttggtgcagtgcactcctccgccgcgcaggctctcagcctcgtggtctta
gtgctgcagctgctgactcagccaccgggtgccgactcagctctccggtaccgggtagca
gaggagggcccacctgacgtaaagattgggaacgtggccgcagacctgggcctcacggca
ggtactggtagcggggatgtcaccttcgccctagagagcggctcagagtactttaagatt
gacaatgtgacaggtgagctgacaacaggcccacggcgtattgacagagagaagcttcca
cagtgccagatgatatttgatgaaaacgagtgtttcttggactttgaggtgtccgtgata
gggccactgcagagctgggtagatctgtttgaagggcgtgtggtcataacagacatcaat
gacaacacaccttccttcccctcacctgtgctccagctctcagttgaggaaaatcgccca
ataggaaccctttacctgctgcccactgcaacagacagggattttgggcgaaatggcatt
gaccgctatgagctgatccaggatggtggagctgggtcaagttcaacgaggcgcacagca
ggaggaaaccccattaccagagtagatggacttggggatcggaggggaagaagtggagat
aatggagcaggagccaggagcactgtgtttgaactacaagttgcagacataccagatggt
gaaaaacaaccacagctcattgtgaaaggcacattggaccgtgagcaaaaagactcatat
gagctcgtccttagggttcgagatggagggaacccaccacgttcctcccaagccctgctt
cgtgtttccatcacagatgtgaatgacaacagcccacagtttgagaggtccacatatgag
gcagagatggcagaaaatgctcctccgggtacacctgtcctccaggtcagagcttcagat
cgtgacattggagtgaatgggcaggtggagtatgtctttggggctgccactgaatctgtc
aggcgactcctgcgcctggacgaggcaactgggtggctgagcgttcttcacaggattgac
agggaagaggtggctcaactgaggttcacagtaatggccagggacaggggtcagcctccc
cgcactgaccggaccactgtagttttggccgtgcgggatgaaaatgacaatgtcccagtc
gtagagatccgaaagattggacggatccctgttcgagatggtgcagcattagtaccagag
aacgttctggtggacacaccagtggctctggtacaggtgtcagatcgagaccaaggagag
aatggggctgtgacgtgcacagtcgtaggagatgtcccattcacactgaagccagctggt
gaaacagcactcccacccctacctgcagatgaagcgttcgacaggaacaagaaaaaatac
ttcttacatacttctgccttgctggactatgaggccaccaaagagtacagtgttaccatt
gtggcagtagattctggaagccccagtctgtccagtaacagctcactgatggtgcgagta
gtagatatcaatgaccacgccccaacctttgcccagagtgttgtggaggtccattttgca
gagaacaactcacctcgagagagagtggtcactgtggtagctacagatgcagacagtggc
aagaacgcggagattgcatactccttggatcctgccggcaatgggccattttacatagat
gcagataatggagatatccgtgccactggggttctggaccgtgagcagcgagagaggtat
gaactgcgggttattgccaaggacaagggcaccccttctctgcaaggctctgcgactgtt
gttgttcaggtgaccgaccgaaatgacaatgcgccaaaatttgttcaggaaatctttaca
ttctacgtcaaagagaacctgcttgccaacagcccagttggcatggtcactgtgacggat
gctgacgaaggcgagaatgcagaacttagtctgtttgtagagatggatggagttgaagag
aagaaggcaggagagaaggtggagggtgaagatggagagaaagagcagggtgaagaagtg
ttttccattgagaacaacacaggaactatcttctcctctgcatcgtttgaccgtgaaaag
ctttccacctacaccttccgtgtaagggctgtggatgggggggagcctcgcaaaactgcc
accgccaccgtctcgctctttgtgacagatgaaaatgacaatgccccctcaatcacctct
ccaaccaatgagtcctacacccttcttccacctgccagcagtgcccgcaccgtagtccaa
actgtaacagccatagattcagacacaggcccaaatgcagaccttcgctatgctctagtg
gggggaaatcccttcagactgtttgagattggacacaccaatggagtaatcaccctggca
gaacccctggagcgtcgccacagaggtctgcatcgcctggtcatacgggtcaatgatagt
gggatcccctctctctgtgcaactgccctggttcatgtcttcattaatgaaagcgtggcc
aacgccacccttgtggatgcacaggtggcccgaagcctgatggctccactgtcactggac
attgcaggggacccagacagtgagcgtgcattaggaaaacagcgcctcagtgtagccatt
ggtgtcctggcgggagccgcagccgtcatcctagtgatactcctcgtggtcacagctcgg
caatgcggtgctcagggcaagaatggctatgaggctggtaagaaggagccagaggaagac
ttcttcagtcctccaggggctcaaccacaggcgggccgtggcgggggatcagaccgtgga
cgcaaacctcgacgggacaaacgtaacggaagcggcggcagtgcagctgcaggaggaggg
aagtcagacagatcactttacagcggtatcgtcacagtcaatggactgcgtcgccatgcc
aatgacgatgatgaggaggatttgagtagtgctagcgagcgcctggcagcccgctactgt
gctgtggatggtgaccctggcagcccgcggatgggcggcggcaggaggcaccaatcaagc
ccagacctggccagacactacaaatccagctcacctctccctgcagtgaacctacagccc
cactcccccccagctgagggaaagaagcaccaggcggtccaggagctgcctccctccaac
acctttgtgggcagtggaggttgtgtggggagtgccggctccagcagcagcagtagtggg
ggcagtggcaatgcagacgccatgtccctgggatctgaccagtgctcagagtatggttgc
cagactgggaacaagtacagcaaacagggaacccttcgccgggtgaccttctcggtagtc
agccagccccaggacgccggttgctatgacagtggcatggaggactcagagacaccgagc
agcaagagttcatcagggccacggctgggagccctgccgctgcccgaagaaggctatgag
cgaaccacaccggagggcagtgtgggcgaggaggagcatgtggagaatgatgccagacag
ctgccagatgtagctctgacaggaaagtgtaccagggaatgtgatgaatttggccactct
gacacttgttggatgcccgtccgcccttcaccacgccagcgtcagcggcacggtagcgac
cccccacggctctccacctttgccccgggtgataataacaacaatctccgtggtaacgac
catgagagtgacagcgagagtgccggcagcgcagggagctcagaacccggggtggttgtt
ggcggagaagctccaagatttcccttagccaatggggatcctcttggcaccctgggtagt
ggagaccgcaacaggaacatgggcgatcacaaccgtaaccttctgaaccgcaagatgact
tcggcatcctacgacacattcagtagcgcaggctttgggagacgccagcaagaggaggaa
ggaggagaaggccagaacccgcctgaggtcataccactgacgcggacaggaggggactac
aagaccacgtcctgtctcacgctgtcacgccgcgaggtctacctgtga
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integrated database retrieval system
