Seriola lalandi dorsalis (Yellowtail amberjack): 111664797
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Entry
111664797 CDS
T06058
Name
(RefSeq) PDZ and LIM domain protein 5-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111664797
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
slal04990
]
111664797
Domain-containing proteins not elsewhere classified [BR:
slal04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
111664797
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
LIM_FHL2-3_N
PDZ_6
PilX
PDZ_2
Motif
Other DBs
NCBI-GeneID:
111664797
NCBI-ProteinID:
XP_023275330
Ensembl:
ENSSLDG00000011763
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MSSSYSVSLAGPAPWGFRLQGGKDFCLPLTISRLTDGGKAVQAKMSVGDIILSINGISTE
SMNHLEAQNKIKACTGNLSLTLQRPSSAPKDAVPKDEPQEIIKPVPITHPAPSSTYTKPS
SQPNPLYNKTARPFGGSSSAVTASSSPAAPKVASIPSESSAFTPAAPSQPPQPPFPLRSS
LPAPDSASANSVSRPSPARSAFTSPSASSSSSNSSSPARVTAPSSHPNVPQPSVYNTPIN
LYSNANASEVAIGQRRGLLESQGVSENFNGKPFVEPENHATAVSDTSKKRLIEDTEDWHP
RTGTSQSRSFRILAQLTGTENDQVPENSGRNEAVDKATPIMYTSPAAKTYSKSAAAPRNG
NVVPASTFKSPVAQTKPSFQPGGPPGFPKGGVAPSFGKVTNPAPKGPDRPTPQPHPEDLN
SVVQRAEHIPAGTRTPMCNKCNTVIRGPFLVAMGMSWHPEEFNCAHCHSSLADRGFVEEK
GQVYCERCYEQFFAPTCSRCNQKILGEVMNALKQTWHVSCFVCTACQQPIRGSMFHMEDG
RPYCEKDYYNLFGTNCHGCDFPIEAGDKFLDALGFTWHDTCFVCAVCSASLEGQAFFSKK
DKPLCKKHAHTVNI
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagctacagtgtctccctggctggccctgccccctggggcttcagactgcaa
ggaggaaaggacttctgtctgcccctcaccatctcacggctgactgatggaggcaaggca
gtccaagccaagatgagtgtcggagacatcattctttccattaatggcatttccacagag
agcatgaatcacctagaagcccagaacaagattaaggcctgcacaggcaatctcagcctc
actctacagagaccctccagtgcccctaaagatgcagtgcctaaggatgaacctcaagaa
atcattaagcctgtcccaatcactcaccctgccccaagcagcacatacaccaagccttca
agtcagcccaatcctctatacaacaagacagctcggccatttggggggagcagcagtgcg
gttacagcttcctcttccccagctgctcctaaagtagcctcgattccctctgaatcgtct
gctttcacgccagctgccccttctcagccgccacagcctccgtttccgctgaggtccagc
ctccctgcaccagactccgcttcagccaactcagtttccaggcccagccctgctcgctcc
gccttcacctccccatctgcctcttcatcctcatctaactcctcctccccagccagagtg
acagccccctcctcccatcccaatgtcccacagccctccgtctataacacacctatcaac
ctctactctaatgccaatgcttctgaggtcgctattggacagagacgaggtcttttggag
agccagggggtgtcggagaacttcaatgggaaaccttttgtagagcccgagaatcacgcg
accgcagtgagtgataccagcaagaagcgtctgattgaggacacagaggactggcatcca
cgaacgggcacctcccagtcccgctccttccgtatcctggcccagctcaccggcactgaa
aatgatcaagttccagagaacagtggaaggaatgaggcagttgacaaagccactcccatt
atgtacacgtcgcctgcagcgaaaacatattccaaatctgcagcagcacccaggaatggc
aacgttgtccccgcttccacattcaagagccctgtagcgcagaccaagccctccttccag
cctggaggtccaccaggttttcctaagggtggggtagctccttcatttggcaaagtcacc
aatcctgctcccaaaggtccggaccgccccaccccacagccacatccagaggacctcaac
tctgtggttcagcgggctgagcacatcccagccggtacacgcaccccgatgtgcaacaag
tgcaacactgtcatcaggggcccattccttgtggccatgggcatgtcatggcaccctgag
gaattcaactgtgctcactgccactcctccctggcagaccgtggatttgtggaggagaag
ggccaggtgtactgcgaacgctgctatgagcagttcttcgctcccacctgctcccgctgc
aaccagaagattctgggggaagtcatgaatgccctgaaacagacctggcatgtgtcctgt
ttcgtctgtactgcctgccagcagccaatcagaggcagcatgtttcacatggaggatgga
cggccatactgtgaaaaagactactacaacctgtttgggaccaactgccatgggtgtgac
ttccccatcgaggcaggggacaagttcctggacgctctaggattcacctggcatgacacc
tgctttgtgtgcgcggtctgctctgctagtctggagggtcaggcattcttctccaaaaaa
gacaagcctttgtgcaagaaacatgcccacactgtcaacatctga
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