Seriola lalandi dorsalis (Yellowtail amberjack): 111664854
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Entry
111664854 CDS
T06058
Symbol
ddx54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slal03009
]
111664854 (ddx54)
Enzymes [BR:
slal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111664854 (ddx54)
Ribosome biogenesis [BR:
slal03009
]
Eukaryotic type
Pre-60S particles
Helicases
111664854 (ddx54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
KH_SLS1_1
CMS1
Motif
Other DBs
NCBI-GeneID:
111664854
NCBI-ProteinID:
XP_023275411
Ensembl:
ENSSLDG00000010380
UniProt:
A0A3B4XAZ0
LinkDB
All DBs
Position
Unknown
AA seq
871 aa
AA seq
DB search
MAQRKKKMTKKKRHTAGREPEADSDSGDFELAAEIKDDDSPGRKLPRFPTSSDHMSDVEL
DTRQLVRAQNKKKKKSGGFQSMGLSYPVYKGVMKKGYKVPTPIQRKTIPVILDGKDIVAM
ARTGSGKTAAFLVPMFEKLKAPQAQTGARALILTPTRELALQTMKFTKELGRFTGLKTAL
ILGGDRMDDQFAALHENPDIIMGTPGRLMHVITQMNLKLQNVEYVVFDEADRLFEMGFAD
QLQEIIRRLPDTRQTLLFSATLPKLLVEFARAGLTEPVLIRLDVDSKLSDQIKLSFFHLR
MDNKPAMLLHLLRNVVKPQEQTVVFVATKHHVEYIKELLSSEGLECAYIYSALDQTARKI
NIGKFVHRKAMVLIVTDVAARGIDIPLLDNVINYNFPPKAKLFLHRVGRVGRAGRSGTAY
SMVCPDEMPFVYDLHLFLGRPVQFATAEHAQDSEGVFGRVPQSILDDEGSHLVTAHENSM
DLENLHRVSENAYKQYLKSRPNPSPESIRRVKNTDLSIMAVHPLLGSGLEKMELERLQIV
DAIKGYKSKSTIFEINSNSKTQASEVMRAKRSKDTRLVDKFSKHREDLAADSRLHQPVNP
TTADDDDGTGKDEDTLKGVFSAVVGGKRKGLREDEEERSKRSRQTGKDEEYYIPYRPKDF
ESERGLSLSGDGTAFEQQASSAVLDLMGDEGDRLNQHKKIMKWDRKRKRFVTDTGKEDQR
KKIRTDVGQVISKKNKKNFYEEWKKKYKVDDGGSGSDGETGGGRGRGGGRGRGGGRGRGG
GGRGGRGRGRLGPNYQSPVRPQQTAGGRGVRSELKTRDQILKQRKKRDKQQFLQSGGMKN
IRAKKKQWLDEVKKSGFGRGGQKKGKMKKRL
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggctcagagaaagaagaaaatgacgaagaagaagagacacacagcgggcagagagccg
gaggctgactctgacagcggggactttgaactggctgctgaaattaaggacgatgattct
ccaggaaggaaactgccgcggttccctacatcatcagaccacatgtcagatgtggagctt
gacaccaggcagctggtcagagcccaaaacaagaagaaaaagaagtctggaggctttcaa
tcaatgggtctcagttaccctgtatacaaaggagtcatgaaaaaaggatacaaagtccca
actccaatccaaagaaagactatccctgtgattttggatggcaaggatatagtagccatg
gccaggactggcagtggtaagacagctgctttcctggttcctatgtttgagaagctgaag
gcccctcaagcccaaacaggagccagggccctcatcctgacccccaccagagagttggca
ctgcagaccatgaagttcacgaaagagttgggaagattcactggcctcaagactgccctg
atccttggtggagacagaatggacgatcagtttgctgctcttcacgaaaaccctgacata
atcatgggtacccccggtcgtctcatgcacgtcatcacgcagatgaacctgaagctgcag
aacgtggagtacgtggtgtttgatgaggctgacaggttgtttgaaatgggttttgccgat
cagcttcaggagatcatccggaggcttccagacaccagacagactctgctgttctctgcc
actctgcccaaactgctggtggagttcgccagagctggtctgacagaaccagtgctgatt
cgtttggatgtggattctaagctcagtgaccagattaagctgtcatttttccatctgcgc
atggacaacaagccggcaatgctgcttcatctcctacggaatgtagtgaagcctcaggag
cagacggtggtttttgtagccaccaagcaccatgtagagtatatcaaggagctgctttct
tcagaaggtttggagtgtgcctacatctacagtgccctcgatcagactgccagaaagatc
aacatagggaagtttgtgcatcggaaagccatggtgctaattgtgacagatgtcgctgct
cgtggtatagacatccccctgctggacaacgtcatcaactacaacttccctcctaaggcc
aagctcttcttgcacagagtcggccgtgtgggacgtgctggtcgcagcggcacagcctac
agtatggtttgtccagatgagatgccttttgtctacgaccttcacctcttcctcggaagg
cctgttcagttcgccacagctgaacacgcacaagattcagagggtgtgttcggccgggtc
cctcagagcatcttggatgacgaaggctctcatctcgtcacggctcacgaaaattccatg
gacctggaaaacctgcatcgcgtctcggagaacgcctacaagcagtacctcaaatcccga
ccaaacccctcaccggagtccatcagacgggtcaaaaacacagatctgtccatcatggct
gtccatccattactcgggtcaggtttggagaaaatggaactggagcgccttcaaatagtt
gatgccatcaagggttacaaatccaagtcgactatctttgaaatcaactccaacagtaaa
actcaggccagtgaggtgatgcgcgccaaacgctccaaggacacacggttggtggacaag
ttcagcaaacatagagaggacctggctgcagacagccgcctgcatcagcccgtcaacccc
accactgctgacgatgatgacggcacaggcaaggacgaggacactctaaagggggtgttc
tctgcagtggtaggtggaaagagaaaaggccttcgggaagatgaggaagaacggtcaaag
agaagcagacagacgggtaaagatgaggagtattacattccctacagacccaaagacttc
gaatctgagagagggttaagtctctccggagacggcactgcttttgagcagcaggcctcc
tctgctgtcctggacctcatgggagatgagggagaccggttgaaccagcacaaaaaaata
atgaaatgggaccgtaagaggaaacgctttgtgacggacacaggaaaggaagaccagaga
aagaagattagaacagatgttggtcaggtcatcagtaagaagaacaagaagaacttttac
gaggagtggaagaaaaaatacaaggtggatgatggaggatctggctcagacggagaaact
ggaggaggaagaggaagaggaggaggacgaggacgaggaggaggacgaggacgaggagga
ggaggacgaggaggtcgtggccgtggtcgtctcggccctaactaccagagccccgtgcga
ccgcagcagacggccggcggcagaggagtgcgctccgagctgaagacgcgcgatcagatc
ctgaagcagcgcaagaaaagggacaagcagcagttcctgcagagcggagggatgaagaat
atccgtgccaagaaaaaacagtggctcgacgaagttaagaagtcagggtttggacggggc
ggacaaaagaaaggcaagatgaagaagagactgtga
DBGET
integrated database retrieval system
