Seriola lalandi dorsalis (Yellowtail amberjack): 111665291
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Entry
111665291 CDS
T06058
Symbol
zfr
Name
(RefSeq) zinc finger RNA-binding protein isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slal03041
]
111665291 (zfr)
Spliceosome [BR:
slal03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
111665291 (zfr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
PDXDC1-like_cen
zf-U1
Motif
Other DBs
NCBI-GeneID:
111665291
NCBI-ProteinID:
XP_023276002
Ensembl:
ENSSLDG00000000762
LinkDB
All DBs
Position
Unknown
AA seq
1074 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHGAAAQYSQQPAAGVAYTHPTTVASYTV
HQAPVAAHTVAAAYAPTAATVAVARPAPVAVAAATAAAYGGYQPTHAATEYGYPQRQPEV
PPPPPPVTSQNYQDSYSYVRSTAPAVAYDSKQYYQQPTATAAVAAAQPQPSVADSYYQTA
PKPGYSQGVTSYTQSQQTRQVTVIKPAAPSPASSTFSIYPVTSTVQPVAAAASVVPSYSQ
SPTYSTNAVTYSGTSYSGYEAAVYSAASSYYQQQQQQKQAVAAVAATAAWTGNSFTKKPP
FQSKQLRPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKVSQSSSNSGT
AGGVLARNAQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEPSMIT
QASSSTTAATSKTTTATPSSSSTTSSLCAATSSSPANSSSPPYLKPVNIVSSGAVGGKNP
LASNLSAASSGSAGKKVNTPKINFVGGNKLQTTVKMEDTRVETKVETSKPATPSSVTQDS
KAEVSDSLSTSALAGLQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHL
KGRRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRR
YEEDMYWRRMEEEQHHWDDRRRLPDGGYPQGPPGPPGLLGVRPGMPGLQPQGPVPPRRPD
SSDDRYVMTKHAAIYPSEDELQSIQKIVSITERALKLVSDIITDQDKANEEDKEKKESCK
DRALKGVMRVGVLAKGLLLRGDKNVNLVLLCLEKPTKGLLTRIVEHLPKQLSIVTPEKYE
VKGSVQEAAIILTSCTEPKMQVTITLTSPVIREENGRDGDVTSGMVKDPADVLDRQKCLD
ALAALRHAKWFQARANGLQSCVIIIRILRDLCQRVPTWSPFPGWAMELLVEKAISSASAP
LSPGDALRRVFECISSGILLPGGPGLVDPCEKKPVDTLTSMGEQQREDITSSAQFALRLL
AFRQIHKVLGMDPLPQINPRFNIRNSRKRRRDNSDGTDSFEGEGKKDKKDYDSF
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatatgtcctgtagtctccttcacctatgtgcccagccggcttggtgaagat
gccaaaatggctacgggcaattactttggatttacccacggcgctgccgcccagtacagt
cagcagccagctgccggggtagcgtacacacatcccaccacagtggccagttacacagtt
catcaagctcctgtggcggcacacactgtggcagcagcctacgctcccactgcagccact
gtagctgtagctaggccggcacctgttgctgtggcggctgctactgctgcagcttatgga
gggtaccagccaacccacgctgccactgagtacggctaccctcaacggcagcctgaagtc
cctccaccgccaccgccggtcacgtcacagaactaccaggactcctactcctatgtccgg
tccacagctccagctgttgcctatgacagtaagcagtattaccaacagcctactgctaca
gccgctgtcgctgccgcacagccacaacccagcgtggcagactcctactaccagacagcc
cccaaaccaggatatagccagggggtaacatcatacactcagagccagcagactcgacag
gtgaccgtgataaaaccagctgctcccagtccagcgtcatccaccttctccatctacccg
gtgacctccacggtccagcctgtggctgctgccgcctctgtggtcccctcctactcccaa
agtccaacgtacagcacaaacgctgtcacctactctggaacttcatactcgggctacgaa
gcagctgtttactcagcagcctccagctactaccagcagcagcagcagcaaaaacaggcc
gtggcagctgtagcagcgacggcagcatggacggggaactccttcaccaagaaaccccct
tttcagagtaaacagcttagacccaagcagccacccaaacccccccagatccactattgc
gacgtctgtaagatcagctgtgccggcccccagacttacaaggagcatctggaaggacag
aagcacaagaagaaggaggcagcactgaaggtttcccagagcagcagcaacagtggtact
gctggaggggtgttagcccgcaatgctcagaaccagctccgctgtgaactgtgcgatgtt
tcctgcactggtgccgacgcttatgctgcccatatccgtggagccaagcaccagaaggtt
gtgaagcttcataccaaacttggtaaacccattccgtctactgagccaagcatgatcact
caggcatcgtcctccaccacagctgccaccagcaaaaccaccacagccaccccaagcagc
tccagcaccaccagttccctctgcgcggccacctcctcctcccctgccaacagctccagc
cccccctacctgaaacctgtcaacattgtcagcagtggtgctgtgggcggcaagaacccg
ttagccagtaacctctctgctgccagctccggctcagctgggaagaaagtcaacacgccc
aagatcaattttgttggtggaaataaattacagaccacagtgaagatggaagacaccaga
gtggagaccaaagtggagacttctaaacctgcgacaccttcttcagttactcaggactcc
aaggctgaagtgtcagattctctgtccacatcggccctggctggactgcagagtgacgtc
cagcctgtcggtcatgactatgttgaggaagtcagaaacgacgaaggcaaagtcatccgc
ttccactgcaagctgtgtgaatgtagtttcaatgatccaaacgcaaaggaaatgcatctt
aaaggtcgaaggcatcgcctgcaatacaagaaaaaggtgaacccagatctgcaggtggag
gtgaagcccagcatccgagccagaaagattcaagaggagaagatgagaaagcagatgcag
aaagaggagtactggagaagaagagaggaggaggagcgctggaggatggagatgcggcgt
tacgaagaagacatgtactggagacgtatggaagaggagcagcatcactgggacgaccgc
cgtcgtttgccagatggagggtatccacaggggcctcctggcccacctggtctactggga
gtccggcctggaatgcctggcttgcagcctcagggtcctgtgcccccccgtcggcctgac
tcttcagatgatcgctacgtcatgaccaagcatgcagccatctacccctcagaagacgag
ctccagtctatccagaagattgtgtcgatcacagaacgagccctcaaactggtttcggac
ataatcacagatcaggacaaggccaatgaagaggacaaagagaaaaaggaatcctgtaaa
gacagagccctgaagggagtgatgagggtcggagtcctagccaaaggcctccttcttcgt
ggagacaaaaatgtcaacctggtcctgctctgcttggagaagccaaccaagggcctcctc
acacgcattgtggagcacctccccaaacaactatcaatcgtaacaccagaaaaatatgag
gtgaagggatctgtccaggaagcagccatcattctgacgtcctgtaccgagcccaagatg
caagtgacaatcacactgacttcacctgtcatcagagaggaaaatggccgggatggagat
gtaacctcgggtatggtgaaagacccagcggacgtcttggacaggcaaaaatgccttgac
gctctggctgctctgcgccacgctaagtggttccaggctagagctaatggacttcagtcc
tgtgtgatcatcatccgaatcctgcgagacctctgtcagcgagttcctacgtggtcgccc
ttccctggatgggccatggagctgcttgttgaaaaggccatcagtagcgcctctgcccca
ctcagcccaggtgatgcactgagacgggtctttgaatgtatttcgtctgggattttactc
cccggtggaccaggactggtggatccctgtgaaaagaagcctgttgacactctgacgtct
atgggagagcaacagagagaggacatcacctcaagtgcccaatttgctctgaggttgctg
gcattccgtcagatccacaaagtgttgggcatggatcctctgccgcagataaaccctcgc
ttcaacatccgcaacagtcgcaagcgtcgccgtgacaacagtgatggaacagacagcttc
gagggtgaaggcaaaaaagacaagaaagactatgacagtttctaa
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integrated database retrieval system
