Seriola lalandi dorsalis (Yellowtail amberjack): 111665473
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Entry
111665473 CDS
T06058
Symbol
brip1
Name
(RefSeq) Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03440
Homologous recombination
slal03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111665473 (brip1)
03460 Fanconi anemia pathway
111665473 (brip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slal03400
]
111665473 (brip1)
Enzymes [BR:
slal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
111665473 (brip1)
DNA repair and recombination proteins [BR:
slal03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
111665473 (brip1)
FA (Fanconi anemia) pathway
Downstream FA components
111665473 (brip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
HBB
Motif
Other DBs
NCBI-GeneID:
111665473
NCBI-ProteinID:
XP_023276258
Ensembl:
ENSSLDG00000011482
LinkDB
All DBs
Position
Unknown
AA seq
1194 aa
AA seq
DB search
MATPRVEYTIGGVKIHFPCKAYPSQLAMMNSIVRGLNYGQHCLLESPTGSGKSLALLCSA
LGWQRAQLAKLQEGGGTGDDKSQSDKCAEDCNKSDVTSVCQCVCHNKACRPSATPAATPA
SATPAATAASATPATPAAAAAAVDPDVVDLNESPCKETTQLQPPAPGQTPLQDESQPRKQ
SIASRLSEKFQSAANKDDDFQPDRKRIRTAEHKGRKRQRLEKGVIFIDDDSELENEPPDQ
SVSTETNNPAAGLFSSYSPLEPCSWCPCASAKESVKDKDKDKDKDGKKKMPKIFFGTRTH
KQITQIAHELKRTVYSSVPMTILSSRDHTCINPEVAPHSNRNERCKDLLEGKDGRSCRFY
HGVQRMRDHQSLRASGLREAWDIEDLVSLGKRLRSCSYYAARELMQSAAIIFCPYNYLLD
PMIRESMEIDLAGQILVLDEAHNIEDCARESASYTLDRNNLLTCKDELDSMVKNKIRASK
HEPLRNFCYSLINWIQESQGLLSERGYETASKVWNGKDILGIFHDLGITAGTFNLLKQNL
AAVLEKEERVGLVNGKEDMVQVPVISSASSTVLKNLFMVLDFLFRDNCRFAEDYRVALQR
TYAWSNQLPPDVPDAQGFLVRPRYRQRQSARVKTEVLTLNFWCLNPAVAFSDLSGSVHSI
VLTSGTLSPMGSFSSELGVKFSIQLEANHVINKSQVWVGTIGAGPQGRKLCATFQHTETY
TFQDEVGALLLHICQVVAKGVLCFLPSYKMLDKLRDRWVNTGLWEKLEQQKTVITEPRGG
GKGDFDELLQTYYDAIKYCEERDGALLIAVCRGKVSEGLDFTDDNARAVVTIGIPFPNIK
DLQVCVCVTSGLSKWVRQLVQHHDTFNNAMQSLVAFSQVQQKAAAAAAERQTPDSTASSP
NGHLPVTAEGRGPASHPQTPPVKAPEPQQHRSPSPPRRVSPPHVKTEQNGKADWLKSSSP
AKPPSHQQRPARPFYNIFTSTPVSSRFKKAVFRGKAPADPEKHLEEAPTQSEPQKKKNAE
TPACLQDGAADTSGEIKAEPRDTPSTVTTPPICEQEEKADKEEEKDQTVFYTPELFEGEG
DEGGEGGEGDEGGPETKSESPPRAVLAAEISPLLSEELLTCDQARGETSGDQGQSALSVR
KENAQLSQGREEEPGGQKSSEEEEVNKLRRKVVNRLSRSRHKPTGNERPGHEKT
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atggctacaccccgggtggagtacaccatcggaggggtgaagatccacttcccctgcaag
gcttacccatcccagctggccatgatgaattcaattgtacgcgggctgaactatgggcag
cactgtttgctggagagtcccacaggaagtggaaagagcttggccttgctctgctctgct
ctgggctggcagcgggctcagctcgctaaactacaagaaggaggaggcacaggggacgac
aagagccagtcagataaatgtgctgaagactgtaataagtcagacgtcacctccgtctgt
cagtgtgtgtgccacaacaaagcctgcaggccctcagctacaccagcagctacaccagct
tcagctacaccagcagctacagcagcttcagctacaccagctacaccagcagcagcagca
gcagcagttgatcccgatgttgtggacctcaatgagtccccgtgtaaagagacgacacag
ctgcagcctccagctcctggacaaacgccgttacaagacgagtctcagcccaggaaacag
tcgatagcctctcgtctgtctgagaagttccagtctgcagccaacaaagacgacgacttc
cagccagacaggaaacgcatccgcactgcggagcacaagggtcggaaaaggcagcgtctg
gagaagggagtgattttcatcgatgatgattcggagctggaaaatgagcctccggatcaa
agtgtgtcgacagagacaaacaaccctgcagctggtttgttctcatcatacagtcccctg
gagccctgctcctggtgcccgtgtgcttcagccaaagagagcgtaaaggacaaggacaaa
gacaaagacaaagacggcaaaaagaagatgcctaagatcttcttcggaacccgcactcat
aaacagatcacccagatcgcccacgagctgaaacgcaccgtgtactccagcgtgccgatg
accatcttgtcaagcagagatcacacctgcatcaacccggaagtggcgcctcattccaac
cgcaacgaacgctgcaaggacctgctggagggcaaggatggcaggtcgtgccggttttac
catggggtgcagaggatgcgggaccaccaaagtctccgggccagtggactgcgtgaagcc
tgggacatcgaggacctggtgtctctgggcaaacggctccgctcgtgctcgtactacgct
gctcgtgaactgatgcagagcgccgccatcatcttctgcccgtacaactacctgctggac
ccgatgatcagagagagtatggagatcgacctggcgggtcagatcctggtgctggacgaa
gcccacaacatcgaggactgtgcgagggagagcgccagctacacgttagaccgcaacaac
ctgctgacgtgcaaggatgagctggacagcatggtcaagaacaaaatcagagcctccaaa
cacgaaccgctcagaaacttctgctacagcctgatcaactggatccaggagagccagggc
ctgctgagtgagagaggatacgagacggcgagtaaagtctggaatgggaaggacatcctg
ggaatctttcacgacctgggcatcactgcaggcacctttaatctcctgaagcaaaacctg
gcggcagtgctggagaaggaggagcgtgttggtttggttaatggtaaagaggacatggtg
caggtcccagtcatcagctccgcttcctccactgtcctcaaaaacctcttcatggttctg
gatttcctcttcagagacaactgcaggtttgccgaggactaccgtgtagctctgcagagg
acctacgcctggtcgaaccagctcccacctgatgtccccgacgctcagggctttttggtg
cggcctcgatacagacagcgccagagcgcccgagtgaagacagaagtcctgacgctcaac
ttctggtgcctcaacccggctgtggctttctccgacctgagcgggtcggtgcacagcatc
gtgctcacatctggaaccctgtcacccatgggctccttctcctctgaactcggggtgaag
ttctccatccagctggaggccaatcacgtcatcaacaagtcgcaggtttgggtgggaacc
attggtgcaggaccacaaggcagaaaactctgcgccaccttccagcacactgaaacctac
accttccaggacgaggtgggggccctgctgctccacatctgccaggtcgtggccaaaggt
gtgctctgcttcttgccgtcctacaagatgctggacaagctgcgggatcgatgggtcaac
actggtctgtgggagaagctggaacaacagaagaccgtgatcacagagccccgcggaggt
ggcaagggggattttgacgaactgcttcagacttattacgacgccatcaaatactgcgag
gaaagagacggtgcgctgctgattgctgtgtgcaggggaaaagtgagtgaaggactagac
ttcacagatgacaacgccagggcagtggtcaccattggaattcccttcccaaacatcaaa
gacctccaggtgtgtgtgtgtgtgacctcaggtttgtctaaatgggttcgccagctcgtc
cagcatcacgacaccttcaacaacgccatgcagtccctggtggcgttctctcaggtgcag
cagaaagcggcggcggcggctgcagaacgccagactcccgactccacggcctcctctccg
aacggtcacctgccggtaacggcggagggacggggtccggcctcgcaccctcagacacct
cctgtgaaagcacctgaaccccagcagcacaggagcccctcccccccccgacgcgtttct
cctccgcacgtgaaaactgaacaaaatggaaaagcagattggttgaagagcagctcgcca
gcaaagccgccctcgcaccagcagagaccggctcggcctttctacaacatcttcacctcc
acccccgtcagcagccgcttcaagaaggccgtcttcagaggaaaggcgcccgctgatcca
gagaagcacctggaagaagctccgactcagtctgagccacagaagaagaagaacgccgag
acgcccgcgtgtcttcaagacggcgcagcagacacgtccggtgaaatcaaagcggagcca
cgcgacacgccgtctacggtaacgacccctcccatctgcgaacaggaagagaaagcagac
aaggaggaagagaaggaccagactgtcttttatactccagaacttttcgagggcgaagga
gacgaaggaggcgaaggaggcgaaggagacgaaggaggcccagagacaaagtcagagtca
cctcccagggcagttttggcggcagagatctctcctctgctgtcagaggaactccttacc
tgcgatcaggcccgaggggaaacctctggcgaccagggacagagcgctctgtcagtcagg
aaggagaacgcacagctgtcacagggacgtgaagaagaacccggcggacagaagtcaagt
gaggaggaagaggtgaacaagctgaggaggaaggtggtgaacaggctgtcgaggtccaga
cacaaaccaacaggtaacgaacgacctggacacgagaaaacatga
DBGET
integrated database retrieval system
