KEGG   Seriola lalandi dorsalis (Yellowtail amberjack): 111665597
Entry
111665597         CDS       T06058                                 
Symbol
rnf4
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
slal  Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:slal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:slal04121]
    111665597 (rnf4)
Enzymes [BR:slal01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     111665597 (rnf4)
Ubiquitin system [BR:slal04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    111665597 (rnf4)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4 zf-RING_5 zf-C3HC4_3 zf-RING_4 zf_RING_Vps8 zf-rbx1 Prok-RING_4 RING_XB3-XBAT31 zf-C3HC4_4 Rtf2 zf-UDP TRAF3_RING zf-RING_11 IBR_1 zf-RING_6 DUF1272 zf-RING_10 MSP1a zf-ANAPC11 zf-RING_16 Zn_ribbon_6
Other DBs
NCBI-GeneID: 111665597
NCBI-ProteinID: XP_023276427
Ensembl: ENSSLDG00000016967
LinkDB
Position
Unknown
AA seq 211 aa
MSSSAHRRRRTAGSPLVSRPSSKNSRAANANRVASRTAGRTVRSTADRMANVSRMADGDL
APPTETIDVMDNTEDIVEEVVDLTCEGSEAAVVDLTNNDSVLLLDEGPQNRRVPTGESYI
VSSDEDEDTSPVLNAAIVSSVHTSRSTPGTISCPVCLDSYSEIVDSGRLVVSTKCGHVFC
SQCLRDALTSSHTCPNCRKRLTHRQYHPLYI
NT seq 636 nt   +upstreamnt  +downstreamnt
atgagcagctctgctcataggaggaggaggaccgcaggaagtcctctggtttccagacct
agcagcaagaacagcagagcagctaacgctaacagagtggctagcaggacggctggcagg
acagttagaagtacagctgacaggatggctaacgttagcaggatggctgatggtgacctt
gccccccccacagagaccattgatgtgatggacaacactgaggacattgtggaggaggtg
gttgatttgacctgtgaaggatcagaagctgctgtggtcgacctcacaaacaacgactca
gtgctgctgctggatgaaggtcctcagaacagaagagtccccacaggtgagagctacatc
gtcagcagtgatgaagatgaggacacgtctcctgtcctaaacgctgccatagtgtcctct
gttcacacttccaggtcaactccggggacgatcagctgtcccgtttgtttggactcgtac
tctgagatcgtcgacagcggccgattggttgtatccactaaatgtggtcacgtattttgc
agtcagtgtctgagagacgctctgacatcatcacacacctgtcctaactgcaggaagaga
ctcacccatcgccagtaccaccccctctacatttga

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