Seriola lalandi dorsalis (Yellowtail amberjack): 111665742
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Entry
111665742 CDS
T06058
Symbol
pcdh7
Name
(RefSeq) protocadherin-7 isoform X1
KO
K16498
protocadherin delta 1
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
111665742 (pcdh7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
slal01009
]
111665742 (pcdh7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
slal04515
]
111665742 (pcdh7)
Protein phosphatases and associated proteins [BR:
slal01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111665742 (pcdh7)
Cell adhesion molecules [BR:
slal04515
]
Cadherins
Protocadherins
111665742 (pcdh7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Mid2
TMEM154
LYRIC
Gp80
Adeno_E3_CR2
DUF1180
Motif
Other DBs
NCBI-GeneID:
111665742
NCBI-ProteinID:
XP_023276582
Ensembl:
ENSSLDG00000022483
LinkDB
All DBs
Position
Unknown
AA seq
1255 aa
AA seq
DB search
MRTIGAVDYLYYCMLILQLVHQPAAKQVLRYRLAEEGPADVRVGNVATDLGIVAGSGEVT
FTLESGSDFFKIDNITGELTTNERRIDREKLQQCQMIFDENECFIDFEVSVIGPAQSWVD
LFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQD
NGENSRRLGSSGDSYSGKRRFEEGASRSSVFELQVADTTDGEKQPQLIIKGALDREQRDS
YELTLRVRDGGDPPRSSQAILRVMITDVNDNSPRFEKSVYEADLPENSSPGAPILQLKAA
DADVGVNGQIEYVFGAATESVRRLLRLDESTGWLSVLHRIDREEVSQLRFTVMARDRGQP
PKMDKATVVLNIKDENDNVPVIEIRKIGRIFLKDGIANVAEDVVVDTPIALVQVSDRDQG
ENGIVTCTVVGDVPFQLKPASEMEGEQNKKKYFLHTSAPLDYEATQEYNVVIVAVDSGSP
SLASNNSLIVKVGDTNDNPPIFSQNVVEVSFPENNAPGERVTTVAAIDADSGKNAEIAYS
LDSSVNGIFSIDADSGDIRVNSILDREQTERYEFKVIAKDKGINTLQGSATVVVLVADKN
DNEPKFMQDVFTFYVKENLEPNSPVGMVTVIDADKGQNAEMSLFIEEEEEIFSIENDTGT
IFSTLSFDREQKTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTVTFPINSSYTLL
PPSSNIRTVVRTVLATDTDTGINADLNYSIIGGNPFKLFEIDGGSGVISLVGKLEQKHYG
LHRLVVQVNDRGQPSQTTTTLVHVYVNETLSNSTVVEAQVAKSLSTSLNTNIAGDPNYDL
SKQRLSIVIGVVSGIMTVILIILVVVMARYCRPKNKNGYEAGKKDHEDFFTPQQHDKSKK
PKKDKKKQKSKQPLYSSIVTVEASKPNGQRYDGVNEKLSDSPGMGRYRSVNGGPGSPDLA
RHYKSSSPLPTVQLHPQSPTAGKKHQAVQDLPPANTFVGTGDNISLGSDHCSEYSSQTIN
KYNKQPFRRVTFSVVSQPQDPHQQGSLQSCYDSGLDESETPSSKSSSGPRLGALPLPEDS
YERTTPDGSVGEAEHMENDSRPLPDVAMTGKCTRECDEYGHSDSCWMPVRTSPERRPSKS
TTNPQQPKLSTFMSGSGSGSSSAEQPGSQETLAMAAMANGDPTAAHMMGDRNRNLLNKKM
ASSSSSYEAFGSPSYGSPGGGEEALGHPTEEIPLAPTGEYKPTSCGTLTRREVYL
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgaggactattggtgcagtggactatttgtactattgcatgctcatcctgcagcttgtg
catcagcccgctgccaagcaagtgctccggtaccgtttggctgaggagggacccgctgat
gtcagagtaggaaacgtagccaccgacctgggcattgttgccgggtccggcgaggtgaca
ttcacgctcgaatcgggctcagattttttcaaaattgacaacataacaggtgagctcacc
accaacgagagacggatagaccgtgaaaaattacagcagtgccaaatgatatttgatgag
aatgagtgttttatagattttgaagtgtcagtcatcggaccagcccagagctgggtcgac
ctgtttgagggaaaagtcatcatattagatataaatgataacaccccgtctttcccttcc
cctgtcctgacactgtctgtggaggagaacagacccattggtaccctttatctgctgccc
actgccacagacagagattttggcagaaatggaatagagagatacgagcttatccaggac
aatggggagaactcaaggcgcctgggctcctctggggattcgtactcggggaagaggagg
tttgaggaaggcgcaagcaggagcagtgtcttcgagctgcaagttgctgacactactgat
ggagagaaacagcctcaactcatcattaaaggggcccttgatagggaacagagagactcc
tatgagctcacactgcgtgttagggatggaggagatccccctcgctcctcccaggccatt
ctgagggtgatgatcactgatgtgaatgataacagcccccgattcgagaagagtgtgtat
gaggctgacctaccagaaaacagctccccgggcgcccccatcctacagctcaaagcggcc
gatgcagacgtgggggttaatggtcaaatagagtatgtgtttggggcagctacagagtca
gtgaggaggctgctgaggttggatgagagcacagggtggctgagtgtgttgcaccgcatt
gaccgtgaagaagtgagccaactgaggttcacagtaatggcccgtgacagaggccagccg
cccaaaatggacaaggccactgtggtgttgaacatcaaggacgaaaacgacaacgtcccc
gtcatagagatacggaaaattggacgcattttcttaaaagatggtatagccaacgtggct
gaggatgtggtggtggacacacccattgccttagttcaggtgtcagaccgtgaccagggg
gaaaatggcatagtgacctgcacagtggtaggggatgttccctttcagctcaaaccagcc
agtgaaatggagggtgagcagaataaaaagaaatacttcctccacacgtctgcaccgctg
gactatgaagccacacaggaatacaatgtggtcatagtggctgtggactctggaagcccc
agtctggcaagtaataactctcttatcgtcaaagtgggcgacactaatgacaaccctccc
atcttcagccagaatgtagtagaggtgtcgtttccggaaaacaatgccccaggcgagagg
gtgacaacggtggcagccatcgacgcagatagtgggaagaacgctgaaatagcctattcc
cttgactcatcagtaaatgggattttctctatcgatgcagacagtggagacatccgagta
aacagcattctggatagagagcaaacagagcgctacgaattcaaagtgatagccaaagat
aagggcataaacacccttcagggctctgcaacagtggttgtccttgtggccgataagaat
gacaacgaaccaaagttcatgcaggatgtgttcaccttctatgtcaaagagaaccttgag
ccaaacagcccagttggcatggttacagtcattgatgcagataaaggccaaaatgctgag
atgagtcttttcattgaagaagaagaggaaattttttctattgagaacgacactgggact
attttctccaccctatcctttgaccgagagcagaaaaccacatacaccttccgagtcaaa
gctgtggatggcggtgaccctcccagatccgccaccgccaccgtttcactctttgtcatg
gatgaaaatgacaacgcaccaacggtcactttcccaattaacagctcctacaccctcctt
cctccttccagtaacatcagaacagtagtcagaacggtcttagccaccgacactgacacc
ggcatcaacgcagacctgaactacagcatcatcgggggaaaccccttcaagctgtttgag
attgacggtggctccggcgtcatttcgctggtggggaagctggagcagaagcactacggc
ctccacagactggtggtccaggtgaacgacagagggcagccatcacagaccaccaccact
ctggttcacgtgtatgtaaatgagactctttccaattccacagtcgtggaggcccaggtg
gctaagagcctgagcacgtctctgaacaccaacattgccggtgaccccaactacgaccta
agcaaacagcggttaagcattgtcattggagtagtttcgggcatcatgacggtcatcctc
attattctcgtcgtagtaatggcccgttattgccggcccaagaataagaatggctacgag
gccggcaagaaggatcacgaagacttcttcacaccacagcagcatgacaaatccaagaag
cccaagaaagataagaagaaacagaagtccaaacagccgctctatagcagtattgtcact
gtagaggcctccaaacccaacgggcagcgctacgacggcgtcaacgagaagctgtcggac
agtccaggcatgggccgctaccgctcagtcaacggagggcccgggagtccagatttggcc
cggcactacaagtccagttcgccactccccactgtccagcttcacccgcagtcgccaaca
gctggaaaaaagcaccaggcagttcaggacctgccccctgccaatacctttgttggcacc
ggagataacatttcccttggatctgaccactgctctgaatacagcagtcaaactatcaac
aagtacaacaaacagccgtttcgccgagtgaccttctcggtggtgagccagccccaggac
cctcaccagcagggatcgctgcagagctgctacgacagcggcctggacgagtcggagacg
cccagcagcaagagttcgtcgggcccccggctgggcgccctccccctgcccgaggacagc
tacgagaggacaacgccggatggcagtgtcggtgaggcagagcacatggaaaatgactcc
cggcccttgcctgacgtagccatgactggcaagtgcactcgggaatgcgacgagtacggc
cactcggactcctgctggatgcctgtgcgcacgtcgcccgagcgacggccatccaagtca
accaccaacccccaacaaccaaagctttccactttcatgagcggcagcggcagcggcagc
agcagcgccgagcagcccggcagccaagagaccctcgccatggccgccatggccaacgga
gaccccaccgccgctcacatgatgggcgaccgcaatcgcaacctgcttaacaagaagatg
gcctcctcctcctcctcctacgaggcctttggctcgccttcctacggctcaccaggaggc
ggggaggaggcgctgggccaccccaccgaggagatccctctggcgcctactggggagtac
aagcccacatcctgtggcactctgacgcgacgggaggtttacctgtga
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