Seriola lalandi dorsalis (Yellowtail amberjack): 111665979
Help
Entry
111665979 CDS
T06058
Name
(RefSeq) LOW QUALITY PROTEIN: clathrin heavy chain 1-like
KO
K04646
clathrin heavy chain
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04142
Lysosome
slal04144
Endocytosis
slal05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111665979
04142 Lysosome
111665979
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
111665979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slal04131
]
111665979
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slal04147
]
111665979
Membrane trafficking [BR:
slal04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
111665979
Exosome [BR:
slal04147
]
Exosomal proteins
Proteins found in most exosomes
111665979
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Gp18_dom_I
TPR_Vps41
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
111665979
NCBI-ProteinID:
XP_023276913
Ensembl:
ENSSLDG00000009130
LinkDB
All DBs
Position
Unknown
AA seq
1690 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGVNPANIGFSYLTMESDKFICIREKVGEQNQVVIVDMTDPTN
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTEEVMFWKWISVNTV
ALVTDTAVYHWSMEGDSQPTKVFDRHASLAGCQIINYRTDEQQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAAFGEFKVEGNAKPSTLFCFAVRSQAGGKLHIIEVGQPAAG
NQPFAKKAVDVFFPPEAQTDFPVAMQIGSKHGVIYLITKYGYIHLYDLESGVCIYMNRIS
AETIFVTAPHEATSGIIGVNKKGQVLSVCVEEENIVNYATNVLQNPDLALRMAVRSNLAG
AEELFARKFNTLFAQGSYSEAAKVAASAPKGILRTAETIRKFQSVPAQPGQASPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKASDPTLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWVFLLRNVMRVNPDQGLQFAQMLVQD
EEPLANINQIVDVFMEGSLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAI
LGNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGALS
VEDSLECLRAMLSANIRQNLQLCVQVASKYHEQLGTQALVELFESFKSYEGLFYFLGSIV
NFSQEPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLIMVVRGQ
FSTDELVEEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNTPERFLKENPF
YDSAVVGKYCEKRDPHLACVAYERGQCDLDLIKVCNENSLFKSEARYLVRRKDPELWANV
LEENNPYRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANXAISNELFEEAFAIFKKFDVNT
SAIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLHRDLVKEAIDSYIKAVDPSAYME
VVNAASKNNNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFVSGPNNAHIQ
QVGDRCYEEAMYEAAKLLYNNVSNFARLASTLVHLGEYQAAVDSARKANSTRTWKEVCFA
CVDGEEFRLAQICGLHIVIHADELEDLISYYQDRGYFEELIALLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQSHLWAELVFLYDKYEEYDNAVITMM
SHPTDAWKEGLFKDIIAKVANVELYYKSLYFYLDYKPLLLNDLLTILSPRLDHSRAVTYF
SKVNQLKLVKPYLRSVQNHNNKSVNEALNNLLTEEEDYQGLRASIDAYDNFDTIGLAQRL
EKHELIEFRRIAAYLYKGNNRWRQSVELCKKDKLYKDAMLYAAESKDAELAETLLQWFLE
EGRKECFAACLFASYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDKLEEAESQ
RKTEEEVTEPQPIVFGQQLMLTASPTPVAPQPAYSGYGYPATGAGYPAQAAAAAAAAAGY
PAQPAYGFNM
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatactgccgatacgatttcaggaacatctgcagttgcagaacctgggcgtg
aacccagccaacatcgggttcagctatctgaccatggagtcggacaagttcatctgcatc
agggagaaggtgggcgagcagaaccaggtggtgatcgtggacatgaccgaccccaccaac
ccaatcaggagaccgatctctgctgacagtgccatcatgaaccccgccagcaaggtcatc
gccctgaaagacgctgccaagacgctgcagatcttcaacattgagatgaagagtaagatg
aaggctcacaccatgacagaggaggtcatgttctggaagtggatatcggtaaacactgtt
gccttggtgacggatacagctgtctatcactggagcatggagggggattcccaaccaacc
aaagtattcgatcggcacgccagtctggcaggatgtcagatcattaactacagaactgac
gaacaacagaagtggctgctgctgatagggatctctgcacagcaaaaccgtgtggttggg
gcgatgcagctgtattctgtcgacaggaaagtgtcccagcccatcgagggccacgctgct
gcattcggggagttcaaagtcgagggaaatgccaaaccctccaccctcttctgcttcgct
gtgcgctcacaggctgggggaaagttgcacatcattgaagttggtcagccagctgcagga
aaccagccatttgctaagaaagcagtggatgtgttcttccctccagaggcccagacagac
tttcctgtagctatgcagattggtagtaagcatggtgttatatacttgatcaccaagtat
ggttacattcacctgtatgacctggagtctggagtgtgtatctacatgaaccgaatcagt
gcagagaccatctttgtaactgcccctcatgaagccacctcgggaattattggggtcaac
aagaagggacaggtcttgtcagtgtgtgttgaagaggaaaacattgtcaactacgccact
aacgtcctgcagaaccctgatctagccttgaggatggctgtcaggtcaaatcttgctggt
gctgaggagctttttgccaggaagttcaacactctgtttgcccagggaagttattcagag
gctgcaaaggttgctgcatcagcaccaaagggtatcctacggacggcagagacaatccgt
aagtttcagagtgtccctgcccagccgggccaggcctctccactgttgcagtactttggt
attctgctggaccagggccagctgaacaagtttgagtctctggagctgtgcaggcccgtc
ctgcagcagggccgcaaacaactactggagaaatggctgaaggaggataagctggagtgc
tcagaggagctaggagacctggtgaaggcgtctgaccccacgctcgctcttagtgtgtat
ctcagagcgaacgtccccaacaaggtcatccagtgcttcgcagagactggtcagttccag
aagatagtgctgtacgctaaaaaggtgggctacaccccagactgggtgtttttattgaga
aatgtgatgcgagtcaatccagaccagggactgcagtttgcccagatgctggtccaggat
gaggagccactggccaacatcaaccagattgtagacgtattcatggagggcagcctgatc
cagcagtgcacctccttcctattggacgctttaaagaacaaccgcccagccgaaggacac
ttacagacacgtctgcttgagatgaacctcatacacgcccctcaggtagcagatgcgatc
ctggggaaccagatgttcacacactatgaccgtgcccatgttgctcagctgtgcgagaag
gcaggtctgctgcagagagcgctcgaacactacaccgacctgtatgatatcaaacgagcc
gtggtgcacacacatctgctcaaccctgagtggctggtgaacttcttcggcgctttatcg
gtagaggactcgttggagtgtttaagggccatgctgtcagctaacatcagacagaacctg
cagctgtgcgtccaggtcgcatctaagtatcacgagcagctgggaactcaggcgttagtg
gagctctttgaatcctttaagagttatgagggattgttttacttccttgggtcgattgtg
aatttcagccaggagcctgatgtccacttcaagtacatccaggctgcctgcaagacaggc
cagatcaaagaggtggagagaatctgtagagagagcaactgttacgacccagagagggtt
aaaaacttcctcaaggaggccaagcttacagaccagcttcctcttatcattgtgtgcgac
cgctttgacttcgtccatgatctggtgctctacctctaccgcaacaatctacaaaaatac
attgaaatctacgtgcagaaggtgaaccccagtcgtttaccggtggtgatcggcgggctg
ctggatgtagactgtgctgaggatgtcatcaagaacctgatcatggtggtcagagggcag
ttttctactgatgagctggtggaggaggtagagaagagaaacaggttaaagcttctgttg
ccatggctggagtcccgtatccatgaaggttgcgaggaaccggccactcacaacgccctc
gctaagatctacatcgacagcaacaacacaccggagcgattcctgaaggagaatcccttc
tacgacagcgctgtggtcggaaaatattgcgagaagagagacccccacctggcatgtgtg
gcttacgagagaggacaatgtgacctggacctcatcaaagtgtgcaacgagaactcatta
ttcaagagtgaggctcgatatctggtacgacggaaagatccggagctttgggcgaacgtg
ttagaagaaaacaacccttacagaagacaactcatcgaccaggtggtgcagacagcactg
tcagagacccaggacccggaggaggtgtccgtcacagtcaaggccttcatgaccgcagac
ctgcccaacgagctgatcgaactgctggagaagattgtgcttgataactctgtcttcagt
gaacacagaaacctccagaacctgctgattttgacggcgatcaaggcggaccgcactcgt
gtgatggagtacatcaacaggctagacaactatgacgctccggacattgctaatnatgcc
atcagcaacgagctcttcgaagaagcgtttgccatttttaagaagtttgatgtcaacacc
tcagccatacaggtattgatagagcacatagggaacttggatcgtgcgtatgagtttgct
gagcgctgcaatgagcctgcagtgtggagccagttagccagagctcagctgcacagagac
ctggtcaaggaggccattgactcatatattaaagccgttgacccgtcggcgtacatggag
gtggtcaatgcagcaagcaagaacaataactgggaagacttggttaaattcctgcagatg
gctcgaaagaaagcgagagagtcgtacgtggagacggagctgatttttgctttagctaag
acgaaccgtctggctgagctggaggagttcgtcagtgggcccaacaatgctcacatacag
caggtgggcgatagatgttatgaggaggctatgtacgaagcagccaagctcctgtacaac
aacgtgtccaacttcgctcgcctcgcatccacactagtccaccttggagagtaccaggca
gctgtggacagcgccaggaaagccaacagcacacggacatggaaagaggtgtgttttgcg
tgcgtggatggcgaggagtttcggctggcacaaatctgtggccttcacatagtgatccac
gccgacgagctggaggacctgatcagctactaccaggaccgcgggtactttgaggagctc
attgctctgctggaggccgccttgggcctggagcgggctcacatgggcatgttcaccgag
ctcgccatcctctactccaagttcaaacctcagaagatgagggagcacctggagctgttc
tggtccagagtcaacatcccaaaggtccttcgtgcggcggagcagtctcacttatgggca
gagctggttttcctttacgacaaatatgaagagtacgacaacgctgtcatcacgatgatg
tctcatccaacagatgcatggaaagaagggctgttcaaagacatcattgctaaggttgct
aatgtggagctgtactataaatccctttacttctacctggattacaaacccctcctactg
aatgacctgctgactattctgtctccgcggttggaccacagccgagctgtcacctatttc
agcaaggtgaaccagctgaagttggtgaagccttacctgagatctgtccagaatcacaac
aacaagtccgtcaacgaagctctcaacaacctgctgacggaggaggaagactaccagggc
ctgagagcgtccatcgatgcctatgacaactttgatacaatcggcctggctcagaggtta
gagaagcatgagctgattgagttcagacgtatcgctgcctacctgtacaagggcaacaac
cgctggagacagagtgtagagctctgcaagaaggacaaactctacaaggatgccatgctg
tacgctgcagagtctaaggatgctgagctggcggagactctgctccagtggttcctggag
gagggcaggaaggagtgcttcgccgcctgcctgttcgcctcctatgacctgctgcacccc
gacgtggtgctggagctggcctggaggcacaacatcatggactttgccatgccgtacttc
atccaggtcatgagagagtacctcacaaaggtggacaagctggaggaggcagaaagccaa
aggaaaactgaggaggaggtgacggagcctcagccgattgtgtttggccagcagctgatg
ttgactgcctctcctactccagtggctccccagccagcgtactcgggctacggctaccct
gccaccggagcgggctaccctgctcaggctgctgctgccgctgccgccgccgccggctac
cctgctcagcccgcttatggcttcaacatgtag
DBGET
integrated database retrieval system
