Seriola lalandi dorsalis (Yellowtail amberjack): 111666556
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Entry
111666556 CDS
T06058
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111666556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slal03019
]
111666556
Messenger RNA biogenesis [BR:
slal03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
111666556
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
111666556
NCBI-ProteinID:
XP_023277688
LinkDB
All DBs
Position
Unknown
AA seq
183 aa
AA seq
DB search
LGCQATGEGAGEDVDSDSDSDDDDDDVRVTIGDIKTGAPQYTTYGAPPVNLNIKTTGSRP
YGQATKLKGVDLDAPGNINGVPVLEVDMESFEEKPWRKPGADLSDYFNYGFNEDTWKAYC
EKQKRLRMGLEVSTVGSVTSKITVQQGRTGNEKDISSLPVHTSKPDFTSPVSLYKSAVSQ
VTR
NT seq
554 nt
NT seq
+upstream
nt +downstream
nt
ttttgggatgtcaggccacaggtgaaggagcaggtgaagatgtggacagtgacagtgaca
gtgatgatgacgacgatgatgtccgagtgaccattggagacatcaaaactggagcgccac
aatacacaacttatggagctcctcctgtaaatctcaacataaagacaacaggctccagac
cttatggacaagccacgaagctgaagggagtggatcttgatgctcctggaaacattaatg
gggttccagtgctggaggtggacatggagtcctttgaagagaaaccctggaggaagccag
gagcggatctgtcagactacttcaattatggcttcaatgaagacacgtggaaggcttact
gtgaaaaacagaagaggctgcgtatgggtctggaggtctctacagtcggctcggtgacga
gcaagatcactgttcagcaaggcaggacaggcaatgagaaagacatatccagtttacctg
ttcacacctcgaagccagacttcacatctcctgtcagcctgtacaagtctgccgtcagtc
aggtcaccaggtaa
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