Seriola lalandi dorsalis (Yellowtail amberjack): 111666578
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Entry
111666578 CDS
T06058
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03013
Nucleocytoplasmic transport
slal03015
mRNA surveillance pathway
slal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111666578
09122 Translation
03013 Nucleocytoplasmic transport
111666578
03015 mRNA surveillance pathway
111666578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slal03019
]
111666578
03041 Spliceosome [BR:
slal03041
]
111666578
Messenger RNA biogenesis [BR:
slal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111666578
Spliceosome [BR:
slal03041
]
Complex C
Other components
EJC/TREX
111666578
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
111666578
NCBI-ProteinID:
XP_023277718
Ensembl:
ENSSLDG00000001566
UniProt:
A0A3B4WCC5
LinkDB
All DBs
Position
Unknown
AA seq
1753 aa
AA seq
DB search
MADLEDVTLDGRPLQSLRVADLKAALEERGLSKSGQKNALIKRLKGALMLENLQRTSTAH
VGLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRLEREAREAYETNEQEDHAEVNNSTSCP
PQAQDVTPALAEQQKPPGPSGGEGMFAGGNEGESNRNQEAHMSGPPASGSVAMRVPERGS
ASSEVPADSDDEDSEDGEEDGDDDDWDSGARRRSLREPARVPTTRERSGASCQPQQQHIP
SLLSPQLRQPTPPPSPPPELSFPLPDTPKQSPPSPDVAPARRSPSSSSSGSSSSGSRSSS
PEPQRSGHAERKPGPLTLLARKMESEGAFSGAGWHGGDGEGDRQESSSPSAASFPGRGPP
EGLVSAITHTANTAGHVPFPMIPGTNQGVTGAQLAHIQVPVSVLKATATEERDRERDSEM
EREKAFELERQEKQRKLEQERAMEVERERALALEREEKQRALEKERIERQQALEREEREK
ALQRERELALEQERQERELALERERQERELAIERERQERELALERDRKERELALAKEREE
REQALARERALELERQKEIERQRALEQERLQREREEREKREREEMERALELERAKALERE
REERERVLEQERLERERALEAERKEKERIEREKALEQERLERERALEQERIEREKALELE
RERALEQERIEREKALERERIEREKALERERIEREKALQQEKLERERALEQERLELERKE
KERIEREKELERERIEKEKALEREREEKEKAAREAALEQERMEKERAEKEKKERLEREKA
LEQEKLERERKEKERAQEEERERALERERLDKEKAIQKEKEEQDRALEQEKERARMAEKE
RESHLPPSKRGREIGLTPLPTPPPLSTGPARKSSTDAGEQEDVHAPMSRSETQAAESGAS
MSPTPLSPQSSFKKFRFLRDSPIQPQSSSTSMVIKRPRTFSDTPQPRASPVFSPTSFGER
QQEGHKPSAEQEDPQKQTKHEVVAGPPGSVRIQSKKETTAGTTLSQSSTKERATSLVSED
KEQADSLKTEQAAKESTKKAKEVDESKRPSSPVDASQRKGRDAKKEVKQTRQRSSSNDSS
SSESDSGSSSSSRSSRSSTSSQEDTSSTSRGRKDGKPGRDPSSQHRVTGDAQAEGLKEIP
KASARKREMSGERSNTTADGDSHTKTPFIEAPTREGTQRKRKHSEAEEEKDKQRQEKETA
MAEPEKLPETSEETPKAFAARKISLSSNKLSPVSAESEQESGAAAGRKRRWGSSTAVTAK
KPSISITTDSLKSLIPDIRPSLGQEAIVDLHPEEAVLSGIEDEERERSDQDLQIRRTVTQ
VVHPESQENGQKEAKRSRHEELEEEDLRGDGESTNEEKMETSFPGAVETQSPSHTSHDVE
INTVTPSDTFIRRSISQQKTGVSITIDDPVRTARQPSPPRGKVSNIVHVCNLVRPFTLGQ
LKELLSRTGSLVEEGFWIDKIKSHCYVTYSCSEEAVATREALHGVKWPQSNPKVLSVDFC
QQDELDFHKGLGAADRPGAEEQGPGSGRGRTPGLPSLLPERDQWAEREREMERRERARAE
REWDRDKVREFGKPGEEKEGGPRRSRSRERRRKERGKSKEKKTEKKDKAAEDPPAKLLDD
LFRKTKAAPCIYWLPLTEEQFVQREAARAERMKEREKRRKEQEEEEEKKREEERKERMKA
GGGTTGDRSEGEKDKDRDRERDRDRDRGRDRDRERERERENDKRRDGYRRPGGSGAGGGR
RSRSRSDPRERRR
NT seq
5262 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctcgaagacgttacgctggacgggagaccgctccagtctcttcgagtagca
gatttaaaagctgctcttgaggagaggggactttcgaaaagtggacagaagaatgctctc
attaaaagactcaaaggggctcttatgttggagaacctgcagaggacctccacagctcac
gttggactgcagccaaactctcagattggtgaggaaatgagccagaacagctttatcaag
cagtatctggctaaacaacaggagctcctgaggcagcgtctggagagagaggctcgtgaa
gcatatgaaacaaatgagcaagaggaccacgcagaagttaacaatagtacttcatgtcct
cctcaagcccaggatgttacacctgcattggctgagcagcaaaagccaccaggcccctct
ggtggagagggaatgtttgctggagggaatgagggagagagtaacaggaaccaggaggct
cacatgtctggtcctccagcgtctggctctgtggccatgcgtgttcctgagaggggttct
gcatccagcgaagttccagctgacagcgacgatgaggatagcgaggatggagaggaggat
ggtgacgatgatgactgggacagcggtgctcggaggagaagcctcagagagccagctaga
gtacccacgaccagagagaggtccggagcatcctgtcaaccccagcagcaacacatccct
tcccttttgtctcctcagctacgccagccaacacctcccccctccccgcctccagagttg
tcattccccttacctgacacccctaaacagagcccccctagtccagatgtagccccagct
aggcgctcacccagtagctccagctctggttcctccagcagcggcagccgcagtagcagc
ccagagccacagaggagtggacatgccgaacgcaagcccggaccactgacccttctggca
cgtaaaatggagtcggaaggtgctttctctggagcaggttggcacggcggcgatggggaa
ggcgatagacaggaaagcagttcgccttcagctgcatcgttccccggcagagggcctcca
gagggtctggtatctgccatcactcacacagccaacactgcaggccatgtgccatttccc
atgattccaggcaccaaccagggtgtcacaggagcacagttggcccatattcaagtaccc
gtgagtgtgctcaaggccactgcaacagaagagagggacagagagagggactctgagatg
gaaagagaaaaggcgtttgagctggaaaggcaagagaagcagagaaaacttgagcaagaa
cgagcaatggaggtagagcgtgaaagagctcttgcactagagagagaggaaaagcagaga
gctttggagaaagagcgaattgagcgacagcaggccttagaaagagaagaacgggaaaaa
gctttacagcgggagagagaacttgctctggagcaagagaggcaggagagggagcttgct
ctggagcgagagaggcaggagagggagcttgctatagagcgagagaggcaggagagggag
cttgctctagagcgagataggaaggagagggagcttgctttggctaaagagagagaggag
cgagagcaagccttagcacgagagagggccctggagctggagaggcagaaggagatcgaa
agacagagggctctggaacaagaacgtttacagagagaaagagaggagagggagaaacga
gagagagaagaaatggagagagcgctggagctagaaagagccaaggctttggagagggaa
agggaggagagagagagggttcttgagcaagagaggttagagagagagagagctttggag
gctgagagaaaggagaaggagaggattgaaagagagaaggccttggagcaagaaaggtta
gaaagggagagagccttagagcaagagaggatagagagagagaaagccctggaactagag
agggagagagccttggagcaagagaggatagagagagagaaggccttagagcgggagaga
attgagcgagagaaagccctggagcgagagagaatagaaagagaaaaggctctacagcag
gaaaagttagagagagagagagctctagagcaggaaaggttggagcttgagaggaaggaa
aaagagagaattgaaagggagaaagaattagaacgagagaggatagagaaggaaaaggcc
ttggaacgagaaagggaggaaaaagagaaggcggcgagggaggcagctctggaacaggag
aggatggagaaggaaagagctgaaaaagagaagaaagaaaggctagagagggagaaagct
ctagagcaggagaaactcgaaagggagagaaaggagaaagagagagctcaggaagaagag
agggaaagggctctcgaacgcgaaagattagacaaagagaaagccatacagaaagagaag
gaggagcaggatagggccttggaacaggagaaagagagagctaggatggctgaaaaggag
agggagagtcacctccctccatccaaacgtggccgggagattggtctcacccccctgccc
actcctccccccctctccacaggaccagctagaaaatcatcgactgatgcaggagagcag
gaagatgtccatgctccaatgtcccggagtgaaacccaagcagcagagtccggtgcatcg
atgtcaccaacacctctgtcgccacagtcctcatttaagaagttccggttcttaagggac
tctccgattcagccccaatcttcctccacttccatggttatcaagcggccccgtaccttc
tctgataccccccagcctcgggcctcacctgtcttctcccccaccagttttggggaacga
cagcaggaaggacacaagccctctgctgaacaggaagatccacagaagcagacaaaacac
gaggttgttgccgggccaccgggatcggttaggatccagtctaagaaggagacaactgct
ggcaccacattgagccagagttccacaaaagaaagggccacaagtctcgtatcagaggac
aaagaacaggcagattcattgaagactgaacaggctgccaaggaatccaccaaaaaggca
aaagaagtggatgaaagcaagcgcccttcgagtccagtggatgcctcacagcggaaggga
agagatgcaaagaaggaagtgaaacaaacgagacagcggtcatcatctaatgattcctct
tcctcagaatcggactctgggtcctcatcatcatctcggtcctcgaggtcatccacgtct
tctcaagaggacacttcctccacctccagaggtagaaaggacgggaaacctggaagagat
ccctcatcgcagcacagggtgacaggagacgctcaggctgagggtttaaaggaaatccca
aaagcctctgctcgcaaaagagagatgtctggagagaggagtaacacaactgctgatgga
gatagtcacaccaagacacctttcattgaagctccaacccgagaggggacacaaagaaaa
agaaagcacagcgaagcagaggaggaaaaggacaaacaaaggcaggagaaagaaactgct
atggcagagccagagaagcttccagagaccagcgaggagacaccgaaggccttcgcagct
cgtaagatctctcttagcagcaacaaattgtccccggtcagtgcagagagtgagcaggag
tctggggctgcggccggtcgcaagaggaggtggggatccagcacagctgtcactgccaag
aaaccttccatcagcatcaccacagactctctcaagtctctgatcccagacatccggccg
tctcttggccaggaggcaatagtggatctgcacccggaggaagctgtcctctctgggatt
gaggatgaagagagggagcgctccgaccaggaccttcagatccgtcgcactgtcacacag
gtggtgcacccggagagccaggagaatggacagaaagaggcgaagaggagcagacatgag
gagctggaggaggaagatctacgaggagacggagaaagcacgaatgaagagaaaatggaa
acctcttttcctggagcagtggaaacccaatcaccatcacataccagccatgatgtagaa
atcaacactgtgacccccagcgacaccttcattcgacgctccatcagccaacagaaaaca
ggtgtttctatcacaatcgatgaccctgttcgcacggcacggcagccttcaccgcctcgt
ggcaaagtctccaacattgttcacgtctgcaacctggtgaggccgttcactttggggcag
cttaaggagcttctcagccgaactggatccctggtggaggagggcttctggattgacaaa
atcaagtctcactgctacgtcacttactcctgctcagaggaggccgttgccacacgggaa
gctcttcatggagtgaaatggcctcagagcaacccaaaagtccttagcgtggacttctgc
cagcaagatgagctggacttccacaaaggcttgggtgcagctgacagacccggagctgag
gagcagggtcctggctccggccgtggtcgaacaccaggccttccctctctcctcccggag
cgagaccagtgggctgagcgtgagcgtgaaatggagcgtcgggagagggctcgagctgag
cgggagtgggatcgtgacaaggtcagagagtttgggaaacctggagaagagaaagaggga
ggtcctcggaggtcgcgctctcgagagaggcggcgtaaggagaggggaaagagcaaggag
aagaagactgaaaagaaggacaaagcagccgaggatccacctgcaaagctgcttgatgac
ctgttccgcaaaactaaagcagctccttgcatatactggcttccacttacagaggaacag
tttgttcagcgagaagctgccagagcagagcggatgaaggagcgtgagaaacggaggaag
gagcaagaggaggaggaggagaaaaaaagggaagaggagcgcaaggagaggatgaaagct
ggaggtggcacaacaggagaccggagtgagggtgagaaggacaaggacagagacagagag
agggatagagacagagaccgaggtagagacagagacagggagagggaaagggagagggaa
aatgacaaacgcagggatggctaccgtaggccggggggcagcggggcaggaggggggcga
cgctcacgcagccgcagcgacccgcgagaaaggcgacgttaa
DBGET
integrated database retrieval system
