Seriola lalandi dorsalis (Yellowtail amberjack): 111666729
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Entry
111666729 CDS
T06058
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111666729 (taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slal03021
]
111666729 (taf5)
03036 Chromosome and associated proteins [BR:
slal03036
]
111666729 (taf5)
Transcription machinery [BR:
slal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111666729 (taf5)
Coactivators
SAGA/TFTC/STAGA complex
111666729 (taf5)
Chromosome and associated proteins [BR:
slal03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
111666729 (taf5)
STAGA complex
111666729 (taf5)
TFTC complex
111666729 (taf5)
SAGA complex
111666729 (taf5)
SLIK complex
111666729 (taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_Nup120_160
WD_LRWD1
PEP5_VPS11_N
PROPPIN
CDK5RAP3
VPS8_N
LisH_TPL
LisH_PAC1
Motif
Other DBs
NCBI-GeneID:
111666729
NCBI-ProteinID:
XP_023277942
Ensembl:
ENSSLDG00000010283
UniProt:
A0A3B4XA77
LinkDB
All DBs
Position
Unknown
AA seq
750 aa
AA seq
DB search
MAAVQGGLVDADEDKDIKTEPSSDGWGNNNANDGRLLSPSPGSSSSAGSNKTVAGAPEDQ
QTLLAVLQFLRKNKLTESVEILRREAGLPEDSLELKGTDSSGAGSGGAAGSVDLEGGDAS
SLLSRVTISSSAGAQAPTKATAGEDQPDVNVVLSAYSQQGDPALYQVYYSGLKRFIETVL
DCHRAELSQVFYPLFVHMYLELVYNNHESEAKAFFEKFSGDQECYYEDDLRVLSSLSKKE
HMRGNETLLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWNIIQEHLYIDIFDGMPRSK
SQIDAMSGSLAGEAKREANKAKVYYGLLKEPEIELPLDDEDEEAENEEGKPKKKKPKKDS
MGSKSKKQDPNAPSQNRIPLPELKDSDKLDKIMYMKEATKKIRLGPDNLPSICFYSFLNA
YQGLTAVDFTDDSSLIAGGFADSTVRVWSVTPKKLRKVKSAADLNLIDKESDDVLERIMD
EKTASESKILYGHSGPVYGISFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVW
DTQFSPHGYYFISGGHDRVARLWATDHYQPLRMFSGHLADVTCTRFHPNSNYVATGSSDR
TIRLWDVLNGNCVRIFTGHKGPIHALAFSPNGKFLASGATDGRVLLWDIGHGLMIGELKG
HTDTIYSLRFSRDGEILASGSMDNTVRLWDAMKAFDDLETDDFTAATGHIHLQDNSQELL
LGTYMTKSTPVIHLHFTRRNLLLAAGAYNP
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtacagggtggtttggtcgacgctgatgaagataaagacataaaaacagaa
ccatcaagcgatggctggggaaataataatgcaaacgacggaagactgctctctccgtcg
ccaggctccagttcttcggctggaagcaacaaaactgtggcgggagctccggaggaccag
cagacgctgctggcagtcctgcagttcctcaggaagaacaagctgaccgagtccgtcgaa
attttgcgtcgtgaagcgggattacctgaggattcactggagctgaagggcactgattcc
tcaggcgcaggttcgggaggtgctgcgggcagtgtggatttagaaggcggggatgcgagc
tctcttctcagccgggtgaccatttcatcctccgccggagctcaggcgccaacaaaagca
acggctggggaggatcagccagatgtgaatgtggtgctgtccgcttacagccagcaggga
gacccggctctgtatcaggtttactacagcggcctgaagaggttcatagagacggttttg
gattgtcacagagcagagctgtcccaggtcttttacccgctgtttgtccacatgtatctg
gagttggtgtacaacaatcacgaaagtgaggccaaggctttctttgaaaagttcagtggg
gaccaggagtgctattatgaagatgacctgcgtgttttgtccagcctgtcaaagaaagaa
cacatgagaggcaacgagactctccttgacttccgcaccagcaaatttgtcctgcgcatc
tcccgtgattcttaccagctgctgaagagacacctgcaggagcgtcagaacaaccagatc
tggaatatcatccaagagcacctctacattgatatcttcgatggcatgccacgcagcaag
agccagatcgatgccatgtctggcagcttggctggagaggccaagagagaggccaataag
gcgaaggtttactacggattgctgaaggaaccagaaattgagctacctcttgatgatgaa
gatgaggaagcagaaaatgaggagggtaaacccaagaagaagaaacccaaaaaggacagc
atgggctccaaaagcaagaagcaggatcctaatgcaccttcacagaataggatacctttg
ccagaactgaaggattcagacaagctggacaagatcatgtacatgaaagaggccaccaag
aagatccgcctgggaccagataacctcccctctatctgcttctactcttttctaaatgcg
taccagggtttgactgcagtggacttcacagatgactccagcctcattgcaggaggcttc
gctgactccacagtacgggtttggagcgtcacaccgaaaaagctccgcaaggtcaagtct
gcagcagacttgaatctgattgacaaagagtcagatgatgtgcttgagaggatcatggac
gagaagacagccagtgagtcaaagatcctctacggacacagcggcccggtgtatggcatc
agctttagcccagacagaaactacctgttgtcaagttctgaagatggtaccgtcaggctg
tggagtctccaaacatttacttgtctagtgggttacaaaggccataattaccctgtgtgg
gacacccagttttccccccatggctattattttatctccgggggacatgacagagttgcc
cgtctgtgggcgacagatcactaccagcctctacggatgttttctggtcatctagctgac
gtcacttgcacccgtttccaccccaactccaactatgtggccacagggtcgtctgaccgc
accatccgcctctgggacgtcctgaatggcaactgtgtccgcatattcaccggtcataag
ggtcctatccatgcgctggctttctctcccaatgggaagttcttggcttctggagccact
gacggcagagttcttctgtgggacatcggtcatggtctgatgattggagagctcaaaggc
cacacagataccatctattccctcaggttcagcagggatggcgagatccttgcctccggc
tccatggacaacacagttcgtctgtgggatgcaatgaaagcatttgatgatttagagact
gatgacttcacagcagccacaggacacattcatctacaagataactcccaggagcttctg
ttgggcacctacatgactaaatccacacctgtgatacaccttcacttcacccggagaaac
ctgctgctggccgcgggggcctacaatccataa
DBGET
integrated database retrieval system
