Seriola lalandi dorsalis (Yellowtail amberjack): 111666992
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Entry
111666992 CDS
T06058
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03420
Nucleotide excision repair
slal04115
p53 signaling pathway
slal04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111666992 (ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
111666992 (ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
111666992 (ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slal04121
]
111666992 (ddb2)
03400 DNA repair and recombination proteins [BR:
slal03400
]
111666992 (ddb2)
Ubiquitin system [BR:
slal04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
111666992 (ddb2)
DNA repair and recombination proteins [BR:
slal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
111666992 (ddb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
EIF3I
ANAPC4_WD40
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
111666992
NCBI-ProteinID:
XP_023278312
Ensembl:
ENSSLDG00000023204
UniProt:
A0A3B4YHM9
LinkDB
All DBs
Position
Unknown
AA seq
494 aa
AA seq
DB search
MKTRPTKSGASGPKGKVKKRPAENSGPTLSKKLRDKKDGESSKPGPPLKSAGVQRKGGYG
SILHYIYKSTLGQSLHSQMRQCLQEPFVRSLSAYHFHSATSPFDRRITCLEWNPVHHTTM
AVGSKGGDIYLWDFKVPTNKTFIQGNGAGDFIGGMKFCPTDLSRVYVVSGEGTLTMQSFE
GRTPTILSRTQDCGHDHHNVCYWYCCVDVSVSRQMLVTGDNMGQLLLLGLDGQKIFSNKL
HKAKVTHAEFNPRCDWLLATASVDHTVKLWDLRNIKDKNSFLHDMPHERAVNSAYFNPLD
CTKLLTTDQYDQIRVYSSPDWSKPQHIIQHPHRQFQHLTPIKATWHPVYDLIVAGRYPDD
RVCSGDHRTIDIFDSNTAELVCQLHDPTATGIKSINKFNPMGDVIGSGMGVTVLVWDRNE
SLISDQHTLKEDTSTSVGNLRGQRRSQQRSNRERRGPAVDTKLKKKLASLEESETKTKTK
TGCTKQKQAQTRKK
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactagacctacgaagtcaggcgcatctggaccaaagggtaaagtgaagaaaaga
cccgcagagaactctggtccgactctctccaaaaaactacgagacaagaaagatggagaa
tcgtctaaaccagggcctccactcaagtctgcaggagtccagaggaagggcgggtatggg
agcatcctgcactacatttacaagagcactctgggacaaagtcttcactcacagatgaga
cagtgtctccaggagcctttcgttcgttctctgtcagcctatcatttccacagtgccacc
agccccttcgaccgcagaatcacctgtctggagtggaaccccgttcaccacaccaccatg
gctgtgggatccaagggtggagacatttatctgtgggactttaaggtccccacaaataaa
acctttattcaagggaatggtgcaggagactttatcggagggatgaagttttgccccaca
gacctctccagagtctatgtggtctctggtgagggtacactgaccatgcagagctttgag
ggccgcacacccaccatactgtcccgaactcaagactgtggtcacgatcaccacaatgtt
tgttattggtactgctgtgtcgatgtgtctgtgagccgacagatgcttgtgacaggagac
aatatgggacagctcttactccttggcttggatggacaaaagattttcagcaacaaactc
cacaaagccaaagtgacccatgcagagttcaacccccgatgtgattggttgttggcgacg
gcctcggtcgaccacacagtgaaactttgggacctgagaaacataaaagacaagaatagt
ttcctgcatgacatgcctcatgagagggccgtcaactcagcctacttcaacccgctggac
tgcaccaagttgctcaccacagatcagtatgaccagatccgcgtctactcgtcccctgat
tggtcgaagcctcaacatatcatccaacatccacacagacagtttcagcatctcacaccc
atcaaggccacatggcacccagtgtacgacctgattgtggctggccgctaccctgatgac
cgcgtttgctccggcgatcataggaccatcgacatctttgattccaacacagcggagctc
gtgtgtcagctgcacgatcccaccgctacagggatcaaatctatcaacaaattcaatccg
atgggtgatgtgattggatctggcatgggtgtgacggtgttagtctgggacagaaacgag
tcattgatcagtgatcagcacacactgaaggaggacacctcgacctcagtgggcaacctg
agagggcagaggaggagtcagcagcgctccaacagggagcggagaggtcctgctgtggat
acaaagctcaagaaaaaactggcctctctggaggaatctgagaccaaaaccaaaaccaag
actgggtgtactaaacaaaaacaagcacagacgaggaagaagtga
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