Seriola lalandi dorsalis (Yellowtail amberjack): 111667043
Help
Entry
111667043 CDS
T06058
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
111667043 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slal03019
]
111667043 (myo5c)
04131 Membrane trafficking [BR:
slal04131
]
111667043 (myo5c)
03029 Mitochondrial biogenesis [BR:
slal03029
]
111667043 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
slal04812
]
111667043 (myo5c)
Messenger RNA biogenesis [BR:
slal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
111667043 (myo5c)
mRNA cycle factors
P-body specific factors
111667043 (myo5c)
Membrane trafficking [BR:
slal04131
]
Others
Actin-binding proteins
Myosins
111667043 (myo5c)
Mitochondrial biogenesis [BR:
slal03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
111667043 (myo5c)
Cytoskeleton proteins [BR:
slal04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
111667043 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
Csm1_N
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
111667043
NCBI-ProteinID:
XP_023278378
Ensembl:
ENSSLDG00000020988
LinkDB
All DBs
Position
Unknown
AA seq
1742 aa
AA seq
DB search
MALLELYTEYNRVWIPDAEHVWKSAEIMRDFHFGDNVLELLLEDGTEHYYPVDPSKPQLP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESRIIYTYCGIILVAVNPYKQLPIYG
DAIIHAYSGQNMGDMDPHIFAVAEEAYKQMARNHKNQSIIVSGESGAGKTVSARYAMRYF
AVVSKSGSKTRVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDRRYRIIGANMR
TYLLEKSRVVFQADNERNYHIFYQLCSCAHLPEFKSLRLLSAENFQYTRMGGDITIEGVD
DKKDMEETRRTFSLLGLKEDFQADVFRVLAAILHLGNVEVRNSGEDKSSVSPSDPHLAII
CELLGVSAEGLVRWLCHRRIVLVAETVMKPMPKERAVNARDALAKQIYAHLFDCIINRIN
TALKVPGKQHAFIGVLDIYGFETFDINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
DIPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGSDKSWLQKLYNYLDSSPLFEKP
RLSNEAFVIQHFADKVEYQCRGFLEKNRDTLYEELVDIMRVSKLPFLANFFQEEEQNTVT
CKGVKVRPARPGVKPANKQLRTSVGDKFRSSLSLLMETLNATTPHYVRCIKPNDEKFPFE
YDSRRVVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYSILMSHQEADLADKKQTCKNV
LQRLIQDPNQYKFGRTKIFFRAGQVAYLEKLRLDRLRGACVTIQKHIRGWSQRRKYLRVR
EAAIILQQYIRGKRTIRKTVSAAMLKQGWAALVIQRHWRGYRMRQVYQVVRLASVTIQAF
ARGWVARKRYKKMMEEHKAVVLQKYARAWLARRRFQTIRRLVLNVQLSFRVQQLRKKIEE
QSKENRGLVERLTSLANSHSQTVDRLQGLEAQLEKSTSQKATLEAREKKVKEDATLTIAQ
IQKEREVLTLEKQNLEKKFEASAKEAKESFDQIKRNLLDEKENEARLRKIAENSTEIQRQ
DHEKEVQALKEEIKRLKEERVSLHRKIEEGGQVNSDLQEQVIQLSKHVKAIPELRKDLNS
LQNQRNNMDRKMKQQSEQARAKMNEITRQLLGGVVEEEVLLGLTPDDSEKIYDVEDFVAA
FEGLHKATRILENHQREQKERYETQLEGLQLKVDHLKNENSKLQNLFQEKSSVNEDIRQE
VSRLSSENSVIPELKLQVSELQRQKQELELHVEEQNQELAEKTEEITNILQKKIEEESSQ
RRHFEEKAEELEEVKRELQGQVEDLEEENDHLKRQHLMQNEAKSKMRQETSRLTAENMDF
EEQLDQKDRLIKKLQNHIKSLETSQKAKQTSAPAIPKDYLGMLEYKREDEPRLVQNIILE
LKPKGVVVNMIPGLPAYILFMCIRHADYLNDEAKLKSLMNAIIGAVKKVIMSHHKDFELL
SFWLSNMYQLLNCLKQYSGEEEFMKQNTPRQKKNCLQNFDLSEHRQILSDLAIHIYHQFI
TVMEKALTPAIVPGMLEHESLQGISSMKPTGFRKRSNSIYDDLETYTISSIIQQLSVFHS
TMTQHGMEQGLIKQAVKQLFFLVGASTLNNIMLRKDMCSCRKGMQIRCNISYLEEWLKEK
ELQSSNAIDTLRPLSQAAWLLQVNKSTDDDAKEITETCTELSPVQIVKILNSYTPIDDFE
KRVTSSFVRKVQSSLQDREGSTQLMLDTDYRFQVTFPFCPSSQALELLQVPSSLHLGFLT
RI
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atggctttgttggaactgtacaccgagtacaacagggtgtggattccagatgcagaacat
gtgtggaaatcagcagagattatgagagattttcattttggagataatgttcttgaattg
cttcttgaagacggcacagagcactactaccctgttgacccatcaaaaccacaactcccc
cctcttcgcaacccagacatcttggttggggagaatgacctcactgctctcagctacctc
catgaacctgctgttctgcacaacctcaaagtgcgatttgtggagtccagaatcatctat
acctactgtggtattatactggtggctgtaaatccctacaaacagctcccgatctatgga
gatgcaatcattcatgcctactcaggccagaacatgggagacatggaccctcatatattt
gcagtggcagaggaggcttacaaacagatggccagaaaccacaagaaccagtctattatc
gtcagtggtgaatctggagctggtaaaacagtgtctgctcgatatgctatgaggtacttt
gctgttgtaagcaaatctggcagcaagactcgagttgaagacaaagtcctggcatccaat
ccaataacagaggcaataggaaatgcaaagaccaccaggaatgacaacagcagccgattt
gggaaatacacggaaatcagctttgacaggaggtaccggatcatcggagcaaacatgagg
acctacctcttagagaaatccagggtagtttttcaggcagacaacgagcggaactatcac
attttctaccagttgtgctcctgtgctcacctgccagagttcaagagcctaagactgttg
agtgcagaaaacttccagtatacccgcatgggtggggacatcactattgaaggtgtagat
gacaagaaagacatggaagagactcgccggaccttctcgctgctggggttgaaggaggat
tttcaggcggatgtgttcagagttttggcagctattctgcatttggggaatgtggaggtc
agaaactcaggagaggacaaatcatcagttagtcccagtgatccgcacctggcgatcatc
tgtgagctgctgggtgtgagcgcagaggggttggtgcgttggctgtgccatcggaggatc
gttctggtggctgagacggtgatgaagccgatgcccaaagagcgggcagtaaatgccaga
gatgccctagccaagcagatctatgcccatctctttgactgtatcattaacaggataaat
acggcactaaaggtcccaggaaagcaacatgctttcataggtgtcctggacatttatggc
tttgaaacatttgacatcaacagctttgaacagttttgtatcaactatgcaaatgaaaag
cttcagcagcagtttaacttgcatgtgttcaagctggagcaagaggagtacatgaaagag
gacatcccatggacgctcatagatttctatgacaaccagccagtcattgacctgattgaa
gcaaagatgggcatccttgacttgctggatgaagaatgcttgtttcctcagggctctgac
aaaagctggctgcaaaagctgtacaactacctcgactccagtcctctgtttgagaagccc
aggttatcaaatgaggcttttgtgatacaacactttgcagacaaggtggagtatcagtgc
agaggttttcttgaaaagaacagagacactctctatgaagaactagtggacattatgaga
gtcagtaagcttccttttctggccaactttttccaagaggaggagcaaaacactgtgacc
tgtaaaggcgtcaaagtgaggccggccaggcctggggtgaaaccagccaataaacagctg
agaacctctgtgggagataagtttcgcagctccctctccttactgatggaaacactgaat
gctaccaccccacactatgtgcgctgcattaagccgaacgatgaaaaattcccatttgaa
tatgactccaggagggtggtgcagcagctgcgagcctgcggagtccttgaaactattcgt
atcagtgcacagagctatccgtccaggtggacatacattgagttttacagcagatacagt
atcctaatgtcacatcaggaggcggacctcgctgacaagaaacagacctgcaagaatgtg
ctgcagaggttgattcaggaccccaaccagtacaagtttggtcggacaaagatcttcttt
cgagccggtcaggtagcttatctagagaagctgcgtctggaccgacttcgaggagcctgc
gtaaccatccagaaacacatccgcgggtggagccagaggaggaagtacctgcgcgttaga
gaggcagccatcatcctccaacagtacatccgcggaaagaggacaatccgtaaaacagtg
agcgctgcgatgctgaagcagggctgggcagcactggtgatccagagacactggagaggt
taccgcatgagacaggtctaccaggttgtccgtctggcgtctgtcaccatccaggccttc
gcacgtggttgggtagcccgcaaacgctacaagaagatgatggaagagcacaaagccgta
gttctccagaagtatgccagagcatggctggctcgacggcgatttcaaaccattcgtcgg
ctggtgcttaatgtccagctttcgttcagagtgcagcagctcagaaagaagatagaggag
cagagcaaagagaaccgcgggttggtagaaagactgaccagcttggccaacagccactca
caaactgtggacagacttcagggtctagaggcacagctggaaaaatcaaccagccagaag
gcaactctggaagcaagagagaagaaagtgaaagaagatgctactctgactattgcacag
attcaaaaggagagagaagtactaacccttgaaaagcagaacttggagaaaaagtttgaa
gcttccgccaaagaggccaaagagagttttgatcaaataaaaaggaatcttctggatgaa
aaagaaaatgaagcgaggcttagaaaaattgcagagaacagcactgagatccagagacag
gaccatgagaaggaggtgcaggctctgaaagaggagattaagagactgaaagaggagaga
gtcagtctgcacagaaagatagaggaggggggccaggtgaactctgacctgcaggaacaa
gtcatccaactctccaagcacgtcaaggccattcctgagctccgcaaagacctgaacagc
ctgcagaatcagaggaataacatggaccgaaagatgaagcaacagtcggaacaagcaaga
gctaaaatgaacgagattacaagacaacttctgggtggtgttgttgaagaggaggttctt
ttagggctaactccagatgactctgagaagatttatgacgttgaagattttgtggcagcc
tttgaaggcctgcacaaagctaccagaatactggaaaaccaccagagggagcagaaggaa
cggtatgagacccaactggagggcttgcaattgaaagtggaccaccttaaaaatgagaac
agcaagctccaaaacctgttccaggagaaaagtagtgtcaacgaggatattcgccaagaa
gtgtccaggctcagcagtgagaattcagttataccagagctgaaacttcaggtttcagag
ttgcagagacaaaaacaagagctggagctccacgtagaggagcagaaccaagagctcgca
gaaaaaacagaggaaatcaccaacatccttcaaaagaaaattgaagaggagagctcacaa
cgcaggcactttgaggagaaagctgaagagctggaggaggtgaagagggagcttcaaggc
caagtagaggatctggaagaggagaatgatcacttgaagagacagcatctgatgcagaac
gaagccaagagcaaaatgagacaggagacgtcacggttaactgctgagaacatggacttt
gaagagcagctcgaccagaaagacagattaataaagaaactccagaatcatataaagagc
cttgagacatcacagaaagccaagcaaacgtctgcgcctgctattcctaaagactacctc
ggcatgttggagtacaagagagaggacgaacccaggctcgttcaaaacatcattctggaa
ctgaagcccaagggtgtggtggtcaacatgatcccgggtctgccagcgtacatcctcttc
atgtgtatccgccacgctgactacctgaacgatgaagccaaactcaagtctcttatgaac
gcaatcattggtgctgtcaagaaagtcatcatgagtcaccacaaagactttgagttgctg
tccttctggctctcaaacatgtatcagctgctcaactgtctgaagcagtacagcggggag
gaggagttcatgaaacaaaatactccccgccagaaaaagaattgcttgcagaattttgat
ttgtcagaacacagacagatcctcagcgacctggccatccacatctaccatcagtttatc
acagtcatggaaaaggccctgactcctgcgatcgtacccggtatgttggagcacgagagt
ttgcaggggatttctagcatgaagccgacgggcttcaggaagcgttccaacagcatctat
gatgacttagagacttacaccatctcctccattattcagcagctcagtgtctttcactcc
accatgacccagcatggcatggagcagggcctcatcaaacaggctgtcaaacaactgttc
ttcctggtgggtgcgtccaccctcaacaacatcatgctccgcaaagatatgtgctcctgc
aggaagggaatgcaaatcaggtgtaacatcagttacctggaggagtggctgaaagagaag
gaactacaaagctctaatgctatcgatactctgaggccgttgtctcaggctgcttggctg
ctgcaagtcaacaaatccacagatgatgacgccaaggagatcactgaaacatgcactgaa
ctcagccccgttcagattgtcaagattttgaattcatacacacccattgatgattttgag
aaaagggtgacgtcatcatttgtccgcaaagttcagtcatcactacaagatcgtgaaggg
tccacgcagctgatgctggacacagattatcgtttccaggtcacgtttcctttctgcccg
tcctcacaggctctggagctgctgcaggtcccgagcagtcttcatctgggctttctgacc
aggatctga
DBGET
integrated database retrieval system
