Seriola lalandi dorsalis (Yellowtail amberjack): 111667457
Help
Entry
111667457 CDS
T06058
Symbol
sympk
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03015
mRNA surveillance pathway
slal04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111667457 (sympk)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
111667457 (sympk)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slal03021
]
111667457 (sympk)
03019 Messenger RNA biogenesis [BR:
slal03019
]
111667457 (sympk)
Transcription machinery [BR:
slal03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111667457 (sympk)
Messenger RNA biogenesis [BR:
slal03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
111667457 (sympk)
U7-dependent histone pre-mRNA processing factors
111667457 (sympk)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PDS5
Cnd1
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
111667457
NCBI-ProteinID:
XP_023278937
Ensembl:
ENSSLDG00000014774
LinkDB
All DBs
Position
Unknown
AA seq
1222 aa
AA seq
DB search
MELSSEEGETSHVIDMTTSEKVVELLNQAALIPTDEKLTVLKQVQELIINKDPSLLDNFL
DEMIAFQTDKSIEVRKFVIGFIEEACKRDNELLLRLIANLNMLLKDESVNVVKKAILTLT
QLYKVTLQWLVRGKTVSEMQEACWDLVTQMKGDVLALLDSENDGVRTHAIKFTESLIITL
SPRTSDSDIPKRQEGDISLDKVPKDHSYIRYDVLCEEGKSALEKLLKFMVHPAISSINLT
TALGSLATIARQRPMFMSEVVQAYETLHANLPPTLAKSQVSSVRKNLKLHLVAVLKHPCS
VEFQGQISTLLLDLGMPQSEITRSTPALREQRKRPRHEQYTEGKKVKMEPALMEDDEDKE
EPAPLTTPNPAVVPVAQSAIDLTAEFLHPLLNPENVANLVLISMVYLPDVMPASFQATYT
PVESAGTDAQIKHLARLMATQMTAAGIGPGLEQCKAREDDAGKEEGNDDDSGAKDLLIKR
KVPAVMVGQAISVVGGYAEKAPTAEAPTAVKRLPEPILPTAQTKLTGASGRKKVFRLSDV
VQPLSDTQIETLTSRAVKRILHSEKAIAQSGMSHVRVKLLSRLVTQFEGMMKEDVLEFIL
DDIRTRSDLAFSLLYQEYNTYLSQLPSGLLDSYDHCLFTLLSGLQEKPEQRDGLFTKLVL
EAPIITESALEVIRRYCEDESRVYLGMTTLKELIVKRPSRQFQYLHVLLDLSSHEKEKVR
TTALAFLKRMYEKDQLRDYIEKFALNYMQLLVHPNPPSLLFGADKDTEVAAPWTEETVRQ
CLFLYLSLLPLNHRLVHELASVYTEAIADIKRSVLRAIEQPIRGMGMNSPELLLLVENCP
KGAETLVTRCLHILTDKVPPSPELVERVRDLYHKRVPDVRFLIPVINGLEKNEVIQALPK
LIKLNPIVVKEVFNRLLGTQHSEGSSSVSPLTPGDLLIALHNIDSTKCDMKSIIKATNLC
FGEKNVYTSEVLAVVMQQLMEHSPLPMLLMRTVIQSLTMYPRLGGFVMNILSRLIVKQVW
KYPKVWEGFVKCCQRTKPQSYSVLLQLPPAQLTSVFERCPEMREPLLQHVHSFTPHQQAH
IPASIMTVLEANKKQQPKPAQPVVEKEVEPITAPDGSVSEEAPTVTLTEPEMPVQHDPAV
TKDDEEPMEQEQLDPVIQEESDNTVSQVELARASETPSPQPEPAEEPMEVSQPGPSDPQE
PEKDAEADITGPEGGSGSEDVE
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atggagctttcttcagaggagggggaaacctctcatgtcatcgatatgaccaccagtgag
aaggtggtggaactcctgaatcaggctgctctgatacccacagatgaaaagctaactgtg
ctcaaacaggtccaggagcttatcatcaacaaggatccctctcttcttgacaatttcttg
gatgagatgattgcctttcagactgacaagtctatcgaagtgagaaaatttgtgattggc
ttcatagaggaagcatgtaaacgagacaatgagctcctcctcagactgatcgctaacctg
aacatgttgttgaaggatgaaagtgtgaatgtggtgaagaaagccatcctcacactcacc
cagctgtacaaagttaccctgcagtggttggttcgtggcaaaacagtatcagagatgcag
gaggcatgctgggatttggtaacacagatgaaaggggatgttctggctttgctggattct
gaaaatgatggtgtgcgcactcatgccatcaagttcacagaatcactgatcatcactctg
tccccgcggacatcagactctgacatccccaaacgacaggagggcgacatcagcctggat
aaagttcccaaagaccactcgtacattcgatatgatgtgttgtgtgaggagggaaagtct
gcacttgagaagctgctgaagttcatggtccacccagccatttccagcatcaacctcacc
acagcactgggctcactggccactattgctcgtcagaggccgatgttcatgtcagaggtg
gttcaggcgtatgagacgctgcatgcaaacctgccgcccactctggccaagtctcaggtc
agcagcgtgcgaaagaatctgaagctgcacctggtggccgtcctcaagcatccctgcagc
gtggagttccagggtcaaatcagcaccctgctgctggacctggggatgccccagagtgaa
ataacccgctctacacctgcactgcgtgagcagcgcaaacgccctcgccacgaacaatac
acagagggaaaaaaggtcaagatggagccagccctgatggaagatgatgaagacaaggag
gagcccgcccctctcacgacccctaacccagctgttgttccagttgcacagtctgccatt
gacctcacagctgagttcctgcacccactgctcaaccccgagaatgtagccaacctggtg
ctcatcagcatggtgtatctacctgacgtcatgccagcatccttccaggccacatacaca
cctgtggagtcagcaggcactgatgcccaaatcaaacatctggccaggctgatggccacg
cagatgactgcagctgggattggtccaggacttgagcagtgcaaagccagagaggacgat
gcaggcaaagaggaaggtaatgacgatgactctggagctaaagacctgctcatcaagcgc
aaagttccagctgtgatggtgggccaggcgatctctgtggtgggaggttacgcagagaag
gctccaaccgctgaggctcccaccgcagtcaagaggcttcctgaacccatccttcctact
gcacaaaccaagttgacgggggcaagtgggaggaaaaaagtgttccggttgtcagatgtt
gtccagcctttatcagacacacagattgagacgttaacctccagagcagtcaaacgcatc
ctgcattcagagaaggcgatcgcccaaagtggcatgtcccatgtcagagtgaagctcctc
tccaggctcgtgacgcagtttgaagggatgatgaaagaagacgtgctggaatttatccta
gatgacatcaggacgaggagtgacctggcattttctctcctctaccaagagtacaacact
tacctcagccagctgccctccgggctgctggacagctacgaccactgtctcttcacgctg
ctgtcaggcctgcaggagaaaccagagcagagggacggacttttcaccaaactggtactg
gaggctcccattataacagaatcagctttggaagtaataaggcgttactgtgaggacgag
tcccgggtgtatttgggcatgacgaccctgaaggagctcattgtcaaacggccatcgagg
cagtttcagtatctgcatgtacttctggatctcagctcacatgaaaaagaaaaggtgcgg
accactgccttggcttttctgaagcgcatgtatgagaaagaccagctcagagactacata
gagaagtttgccctgaactacatgcaacttctggtccatcccaaccctccatctctgctc
tttggagccgacaaagacacagaggtggccgccccctggacggaagagacagtaagacag
tgtctgttcctctacctgtccctgcttcctctcaaccaccggctggtccacgagcttgct
tctgtctacactgaggccatcgctgacatcaagcgcagtgtgctccgagcaatagagcag
cctatccgcgggatggggatgaactctcctgagctgctgcttctggttgaaaactgtcct
aaaggagcagagactttagtcactcgctgcctgcacattctgacagataaagtgcctccg
tctccagagctggtggagagagtgcgagacctttaccacaaacgagtcccagatgttcgt
ttcctaatccctgtcattaacggcctagaaaagaatgaagtcatccaggcgctgcccaag
ctgatcaaactcaatccgattgtagtaaaggaggtgttcaaccgtctcttgggaactcag
cacagtgagggaagttcatctgtgtcccctctgaccccaggagacctgctcattgccttg
cacaacatagactccaccaaatgtgatatgaagtccatcataaaagctaccaacctgtgc
tttggggagaagaacgtctacacgtcagaggttttggcagtggtgatgcagcagctgatg
gagcacagccccctccccatgctgctcatgcgtaccgttatccagtccctcaccatgtac
ccccgactgggcggcttcgtcatgaacatcctgtcccgtctcattgtgaagcaggtgtgg
aagtatcctaaggtgtgggagggatttgtaaagtgctgccagaggacaaagcctcagtcg
tacagtgtgctcctacagctgccccccgcccaactgacaagcgtgttcgaacgctgccca
gagatgagggagcctctcctacagcatgtccactccttcacccctcatcagcaagctcac
atacctgcctccatcatgacggtgctagaggcgaataaaaaacaacagccgaaacctgca
cagcctgttgtggaaaaagaggttgaaccaatcactgctccagatgggtccgtttcagag
gaggctcccactgtgacactgacagaaccagagatgccagttcagcacgacccagccgtc
acgaaagatgatgaagaaccaatggagcaagaacagttggatccagtgatacaggaggaa
agtgacaacactgtctcccaggtggagttggcaagagcaagtgaaacaccatcacctcaa
ccagaaccagctgaggaaccaatggaggtgtctcagcctggaccttcagacccccaggag
ccggaaaaagatgctgaagctgacatcaccggacctgagggtggaagtggcagcgaggat
gtggaataa
DBGET
integrated database retrieval system
