Seriola lalandi dorsalis (Yellowtail amberjack): 111668211
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Entry
111668211 CDS
T06058
Name
(RefSeq) polypyrimidine tract-binding protein 1-like isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slal03019
]
111668211
03041 Spliceosome [BR:
slal03041
]
111668211
Messenger RNA biogenesis [BR:
slal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
111668211
Spliceosome [BR:
slal03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
111668211
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
111668211
NCBI-ProteinID:
XP_023279968
Ensembl:
ENSSLDG00000018767
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
MSCWPLAGTCCSAVPCCAMDGSVHHDITVGTKRGSDELFSSVSNGPYIMSTTANGNDSKK
FKGDIRGPGAPSRVIHIRKLPNDITEAEVISLGLPFGDVSNLLMLKAKNQAFLEMNSEEA
AQNMVGYYSTVMPIIRHHPVYVQFSNHKELKTDNSPNQERAQAALRALSTSHVDPTVAAP
STVLRVVVENLVYPVTLDALCQIFSKFGTVLRIIVFTKNSQFQALLQYPDGASAQAAKLS
LDGQNIYNGCCTLRISFSKLTSLNVKYNNEKSRDFTRPDLPTGDSQPTMEHPAMATAFTP
GIISAAPYAGATHAFPPAFTIQPVSSPYPGLTVPALPGALASLSLPGATRLGFPSISAGH
CVLLVSNLNPERVTPHCLFILFGVYGDVMRVKILFNKKENALVQMSDSTQAQLAMSHLNG
QRLHGKPLRITLSKHTNVQLPREGHEDQGLTKDYSNSPLHRFKKPGSKNYSNIFPPSATL
HLSNIPPSVVEDDLKMLFSSSGAMVKAFKFFQKDHKMALIQMGSVEEAIESLIEFHNHDL
GENHHLRVSFSKSSI
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgctggccgctggctggaacctgttgctccgcagttccgtgttgtgcaatggac
ggcagtgtccaccacgatataacagttggtactaagagaggatctgacgaacttttctcc
agcgtctccaacggcccgtatatcatgagcaccacagccaatggcaacgacagcaagaag
ttcaaaggtgacataagaggtcccggggcgccgtccagggtcatccacatccgcaagctc
cctaacgacatcactgaggccgaggtcatcagcctgggtctgcccttcggagacgtgtcc
aacctgcttatgctcaaggccaagaaccaggccttcttagagatgaactcggaggaagcg
gctcagaatatggtgggttattactccacggtgatgcccatcatcaggcaccacccggtc
tacgtccagttctccaaccacaaggagctgaaaacggacaactcccccaaccaggagagg
gcccaggcagctcttcgggccctcagtacgtctcacgtggacccgactgtggcggctccg
agcacagtgctgagggtggtggtggagaacctggtgtaccctgtcaccctggacgccctc
tgccagatcttctctaagttcggcaccgtgttgaggatcattgtcttcactaagaacagt
cagttccaggctctgctgcagtatcctgacggagcgtcggcccaggccgccaaactgtct
ctggatggacagaacatctataacggctgctgcactctgaggatcagtttctccaaactc
accagcctcaatgtcaaatacaacaacgagaagagcagagacttcaccagaccagacctg
cccaccggagacagccagcccaccatggagcacccggccatggctacagccttcactcca
ggtatcatctcagctgcaccttatgccggagccactcacgccttcccgccagccttcacc
atccagccagtctcctccccctacccaggcctgacggtccccgctctgcccggagccctg
gcctctctgtccctccccggggccaccaggctgggtttcccctccatctctgcaggacac
tgtgtcctactggtcagcaacctgaaccccgagagagttacaccccactgcctctttatt
ctcttcggtgtttatggcgacgtgatgagagtgaagattctgttcaacaagaaggaaaac
gccctggttcagatgtctgacagcacacaggctcagctagctatgagtcacctgaacggc
cagcggctgcatgggaagcctctgcgcatcacgttgtccaaacacaccaacgtccagctt
ccccgtgaaggccacgaggaccagggcctgaccaaagattatagcaactcccccctgcac
cgcttcaagaagcccggctccaaaaactactcaaacatcttcccaccctctgccacccta
cacctctccaacatccccccttctgtggtagaagatgacctcaagatgctgttttccagc
tcgggagccatggtcaaggccttcaagttcttccagaaggaccacaagatggctctgatc
cagatgggctcagtggaggaggccatcgagtccctcatcgagttccacaaccacgacctg
ggagagaaccaccacctgcgggtctccttctccaagtcctccatctga
DBGET
integrated database retrieval system
