Seriola lalandi dorsalis (Yellowtail amberjack): 111668275
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Entry
111668275 CDS
T06058
Name
(RefSeq) LIM domain only protein 7-like
KO
K06084
F-box protein 20
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
111668275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slal04121
]
111668275
Ubiquitin system [BR:
slal04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
111668275
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ_6
PDZ
PDZ_2
RIBIOP_C
Motif
Other DBs
NCBI-GeneID:
111668275
NCBI-ProteinID:
XP_023280058
LinkDB
All DBs
Position
Unknown
AA seq
1306 aa
AA seq
DB search
MEWRQQTSVSCADAFNEAQRWIEEVTGKLFGCNDFRAALENGVLLCDLINQLKPGIIKRV
NRLSTPIAGLDNVNVFLKACGKLGLNESQLFHPGDLQDLSTRVTLRRDESNRRLKNVLIT
IYWLGRKAHLDAFYSGPQLNFKAFEGLLGLALSKALDEGSNVFVKDSGDRECWYPEREER
QRMRLSYKRENSVDSVESLDSRALRQNSEGCGSDAEAEQVFRMETSRTSVHQNRGHVPPP
LLRRKQGREENGPLSRAYQNQVRPERPVQVNPGWIWSKSLSDIPMVYPIRKFPNDNGVYD
VGQDTSRARGWSQENAQKSSVTVKDSEAQWQDDLTKWKNRRRSTKSDLRRKSQDREHVIN
QMTNGALTNLEKNDAQGGLLKRDQQSPRRHAPRPYSTSPPSKSSSSDLRPHTRALLARGY
ATETPFTPMATLSPHKAAHTQGSSVGAMPASDGNILGEETHFASLASDGAGVTTPSLHCP
FSSQTQVKAQGASAPFQSTPELAQPEHVFTNQISTLVTTIQPNETTKSTSTRGPTTSMSS
HKELQFCIDPKVPTFCTDAVHLTAADALEDLSHQNHKSQEESQKTSLEPALDQGRGRQAA
GVYKYLSRTGSWSGSASLPRGYRRSESSSRLSSAITARPFGTKQSRGFSLPRLHNLDDNQ
GLLLNSEKEVVLSPPNKSVPRTAASHLRGQYQASIRQKKTNQAKQNGTDEGEEGKGASLS
SQTSFQTNGHHHQPHTQLLPQPYSNLQSHLHNKSSTLPSTKVDHSDMRVSLALKPNSRPD
FGFQTHWDSTGARVKFIQPGSPAELCQLCVDDEIVAVDGVPVAHMNYSQWKDTMTYALQT
GSLTMDVRRYGNKDWSTSEGSHHSQPGQSRMTINLTAAAPVLIGCPGHHANSTSSADTTV
TKASKFNRQADDVVKGKVVDGGLADSHRTTTSKGSAGFSSWVYLCGGSESAISDLQVPSL
SPSSSSWSWDREEDRRRQEKWQEEQERLLQEQYQRDQERLEAEWRRAQHDAMGDSSRKSG
TFHMTNASTQLHVNALSNKSREEEQSPDRDVLKVAELKPHTNAQGVQNVKITEHDWAVES
CGFAQLSPAHRAKSLSTPALAGPHKQTRGDQRKRKGQSSSKAELDRQQILEEMKKRTQLL
TDNSWIRQRSSSFYKEPICAGVQLKRYESLDDLDALRQSPVSIATFNYPRPHSAAAGYFA
PSRKSSSRYSTGTILPPRNASMDSAHHGRMVSGRRTCCVCQRVLGSGAAMVIEALSLCFH
LACFQCVGCRRHLAGTETGVQVRIRNTKPYCELCYFHLKYTGAPSM
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcgccagcagaccagtgtcagctgtgcagacgcgttcaacgaggctcaacgc
tggatcgaggaggtgactggaaaattgtttggttgcaatgatttccgtgctgccttggaa
aatggggtcctgctttgcgaccttatcaaccagttgaaacctggcatcattaagagagta
aacaggctttctactcccatcgctggcctggataatgtgaatgtattcctgaaagcctgt
gggaaactgggactgaatgagtcacagctgtttcatccaggagacctgcaggacctgtct
actcgtgtaacactcaggcgagatgaaagcaacagaagactcaaaaatgttctgatcacc
atctactggttgggtcgcaaagctcacctagatgctttctacagtggtcctcagcttaac
ttcaaggcctttgaggggctgttaggtttggccttgtccaaagctctagatgagggcagt
aatgtgtttgtgaaggacagcggggacagagagtgctggtacccagagagggaggaacgt
cagcgcatgagactgagctataagagagagaactctgtggacagtgtcgagtctctggac
tcccgggccctccgccaaaacagtgaaggttgtggaagtgacgcagaagctgagcaggtc
ttcaggatggagacctcacggacctcagtccatcaaaacagaggccatgtaccaccacca
ctcctacgaagaaaacaaggacgggaggagaacggtccactctccagagcatatcaaaac
caggtcaggcctgagaggccagttcaggtcaaccctggctggatttggagtaaatcactc
agtgacatcccgatggtttaccccatacgtaaatttcctaacgacaatggcgtttatgat
gtgggccaggacacgagtagagcaagagggtggagccaagaaaacgcacagaagagcagt
gtgactgtcaaggacagtgaagctcagtggcaggatgacttgacaaagtggaagaatcgt
cgcaggagcaccaagtctgacctccgcaggaagtcgcaggacagagagcatgtcattaac
cagatgaccaatggtgctttgactaaccttgagaagaatgacgctcaaggtggactgcta
aagagagaccagcagtcgccacgcaggcatgccccccgtccttactccacctctcctcca
tcaaaatcatcgagctctgatctccggccacacactcgagctctgctggcccgcggctac
gccacggagacacctttcacccccatggctacactgagcccccataaagcagcccacact
cagggatcgtcggttggagccatgcctgcctctgatgggaatatcttgggagaggagacc
cactttgcctccttggcttcagatggagcaggagttactacaccttctctgcactgccct
ttcagctcccagacccaagtcaaagcccagggcgcctcagctcctttccagtccacacct
gaactggcccagccagaacatgtttttacaaaccaaatctccactctggtcacaaccata
cagccaaacgagaccacaaagtcaaccagcaccaggggtcctactacatctatgtcgagt
cacaaggaactccagttctgcatcgatccaaaagttccaactttctgcactgatgcagtt
catctgacagcagctgatgctctggaggacctgtcccaccaaaaccacaagtcccaggaa
gagagccagaagacatctctggaaccagctctggatcaaggtagaggccggcaggctgca
ggtgtctacaagtacttgtccagaactgggtcatggtccggttcagccagccttccgcgt
ggttaccggcggtccgagagctcatcccgtctctcttctgcaatcacagctagacccttt
gggaccaagcagtcgagagggttctcactgccaagactgcacaacctagatgataaccag
ggtctgctgttgaacagtgagaaagaagttgttctttctccacccaacaaatctgtgccc
agaactgcagccagccatctgaggggtcagtaccaggcttcaatcagacagaagaaaacc
aaccaggcaaagcagaatggtacagacgagggggaggaggggaaaggggccagtctgtcc
agccagacctccttccagaccaacggccaccaccatcagccccacacccagctcctgccg
cagccttattcaaatctacagtcccacctccacaacaaaagctccactctgccatctaca
aaggtggatcacagtgacatgagagtgagcctagcccttaaacccaacagtcgaccagac
ttcggtttccagactcactgggactccacgggggcgagagtaaaattcattcaacccggc
agtccagcagagctttgccagctgtgtgtggacgatgagattgtggctgttgatggagtt
ccggtggcacacatgaactacagccagtggaaggatacaatgacatatgccctgcaaacc
ggcagcctgaccatggacgttcgacgctatggcaacaaggattggagcaccagtgagggg
agtcatcacagccagccgggccagagcaggatgaccatcaatctgactgccgcggcgccc
gttctgataggttgccccggtcaccatgccaacagcactagctctgcagacaccacagtc
acgaaagcatcgaaattcaacaggcaggcagacgatgttgtaaaaggtaaagtggtggat
ggaggtcttgctgacagccacaggacaaccacaagtaaaggctctgcaggattcagctca
tgggtttatttgtgtggaggctccgaatctgcgatatctgatctccaggtgccatccctc
agcccctcctcatcaagctggtcgtgggaccgcgaggaggaccgaaggcgtcaggagaag
tggcaggaagagcaggagcgcctcctacaggagcaataccagcgggatcaggagaggctg
gaggcagagtggaggagggcacaacatgatgcaatgggagactcgagcaggaagtcaggg
accttccacatgaccaatgccagcacgcagctccatgtgaatgcattgtcaaacaaatcg
agagaagaggagcagagccctgacagagatgtgctgaaagtagcagaattaaaacctcat
actaatgcacaaggagtgcagaatgtcaagattactgaacatgactgggctgtggaatct
tgtggctttgctcagctgtctcctgcacacagggcaaagtccttgtctaccccggcatta
gccggcccccacaaacagacaagaggtgatcagaggaaaagaaaaggacagtcttcgtct
aaggctgagctagacaggcagcagattttggaggagatgaagaaaaggactcagctcctg
accgacaacagctggatacgtcagcgcagcagcagcttttacaaggaaccgatctgtgcc
ggggttcagctgaagaggtatgagtctctggacgacctggatgctttgcgccagtcccca
gtctcgatcgccacattcaattaccctcgtccacactcggctgccgcgggttattttgcc
ccgagcaggaagtcgtcctcccgctacagcactggaacaatattacccccgagaaatgca
tccatggactccgctcaccatggcaggatggtcagtggcaggaggacttgctgtgtgtgt
cagcgtgtcctgggtagtggtgcagccatggtcatagaggcccttagtctctgcttccac
ctcgcctgtttccagtgtgtgggctgccgccgacatctcgcaggaactgagactggagtc
caggttcgaatccgaaacacgaagccctactgtgagctctgctatttccatctcaagtac
actggtgccccttccatgtga
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