Seriola lalandi dorsalis (Yellowtail amberjack): 111668649
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Entry
111668649 CDS
T06058
Symbol
cdk5rap1
Name
(RefSeq) CDK5 regulatory subunit-associated protein 1
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slal03016
]
111668649 (cdk5rap1)
Enzymes [BR:
slal01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
111668649 (cdk5rap1)
Transfer RNA biogenesis [BR:
slal03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
111668649 (cdk5rap1)
Prokaryotic type
Methylthiotransferases
111668649 (cdk5rap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
LIAS_N
Motif
Other DBs
NCBI-GeneID:
111668649
NCBI-ProteinID:
XP_023280521
Ensembl:
ENSSLDG00000014608
UniProt:
A0A3B4XSL1
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MEFLRTLKPLFTLPQHWIPVRCIPTRCCSNLAKASVNSRQRRTAVDRFRTQLSSGPNFQD
FIKGVSVNKTQPADEESSDRHGYLSEDLEMGNSRRVYFETYGCQMNVNDTEIAWSILQRK
GYLRTSDLNEADVVLLVTCSIREKAEQTIWNRLQQLTAMKRKRLKTHTPMKIGILGCMAE
RLKTELLEREKLVDVLAGPDAYRDLPRLLTVADGGLQASNVLLSLEETYADIMPVHYAPQ
GHSAFVSIMRGCDNMCSYCIVPFTRGRERSRPVSSILEEVRLLSDQGVKEVTLLGQNVNS
YRDTSEEQFCGSDLTQHSRGFKTVYRTKQGGLRFSDLLDRVSLIDPDMRIRFTSPHPKDF
PDEVLHLIAERRNICSQIHLPAQSGSSQVLKAMRRGYTREAYLDLVKNIKKIIPEVSLSS
DFISGFCGETEDDHQQTLSLIREVGYNVGFLFAYSMRKKTSAYHRLQDDVPAEVKRRRLE
ECISVFREEAARVNAALIGSTRLVLVEGKSKRSAEDLCGRTDGNMKVIFPKEDVAAQFAE
SNTAPINAGDYVLVKISSANSQSLRGRALGHSSLRGSVKHCETLPTHRVDERVASVNTVD
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggaattcctcaggactttaaaacccttgtttactcttccccaacactggatacctgtc
aggtgtatcccaaccagatgttgctctaatttagctaaggccagtgtcaattcaaggcag
aggaggacagctgtggacaggttcaggacccagttgtcctctggtccaaattttcaggat
ttcatcaaaggagtttcagttaataagactcaacctgcagatgaagagtcctcagacaga
catggttatctctctgaggacttggagatggggaattcaaggagagtgtattttgaaacc
tatggatgtcaaatgaatgtgaacgacacagagatagcctggtccatactacagaggaag
ggatatctacgcacgagtgatttaaatgaggcagacgttgtccttctggttacatgctcc
ataagagaaaaagctgaacagaccatttggaatagactacagcaactcacagctatgaaa
agaaaacggttaaagacccacacaccaatgaaaattgggattttaggttgcatggcagag
aggctgaagactgagctgctggagcgggagaagctggtcgacgttctcgcaggtccagat
gcgtaccgcgacctcccccgcctcttgactgtagctgacggaggtcttcaggcgagcaac
gtgctgctgtctttagaagagacctatgctgacatcatgcctgtccactacgcccctcag
ggacacagtgcttttgtgtccatcatgcgaggctgtgacaacatgtgcagttactgcatc
gtccccttcacccgaggcagagagaggagtcgacctgtcagctctattcttgaggaagtt
cgtctgctctctgaccagggtgtgaaggaggtgacgttgctgggtcagaacgtcaacagc
tacagagacacgtcagaagaacagttctgcggctcggacctgacccagcacagccgcggc
ttcaagacggtttaccgaacaaaacagggaggcctgcgcttctctgacctgctggaccga
gtgtcactcatcgatcccgacatgaggatcagattcacctcccctcatcccaaggatttt
cctgacgaggttttgcatctgattgcagaacgaagaaacatctgcagccagattcacctt
ccagcccagagtgggagcagccaggtcctgaaagcaatgcgtcgtggctacacaagagag
gcttaccttgatcttgtgaagaacattaagaaaatcatcccagaggtgagtctcagcagt
gacttcatctccggcttctgcggtgaaacggaagacgaccaccagcagactctgtctctg
atcagagaggtgggctacaacgtgggattcctttttgcctacagtatgaggaagaaaacc
agcgcctaccatcggctgcaggatgacgtgccggcagaggtgaagcggcggaggctggag
gagtgtatcagtgtgttcagggaggaagctgcgagggtcaacgccgctctcatcggcagc
acgcggctcgtcctggtggagggaaaaagtaaaagatcagccgaggacctgtgtgggaga
actgatggcaatatgaaagtgattttccccaaagaggacgttgctgctcagttcgcagaa
tccaacactgcaccgatcaatgctggagactatgtgctggtgaagatatcgtcggccaac
tcccagagcctgagaggtcgagccctcggtcacagctccctgagaggctcagtgaagcac
tgtgagactctgcctactcaccgggttgatgaacgtgtggcctcagtcaacaccgtcgat
tga
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