Seriola lalandi dorsalis (Yellowtail amberjack): 111668912
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Entry
111668912 CDS
T06058
Name
(RefSeq) dihydropyridine-sensitive L-type skeletal muscle calcium channel subunit alpha-1-like
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04010
MAPK signaling pathway
slal04020
Calcium signaling pathway
slal04260
Cardiac muscle contraction
slal04261
Adrenergic signaling in cardiomyocytes
slal04270
Vascular smooth muscle contraction
slal04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111668912
04020 Calcium signaling pathway
111668912
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
111668912
09153 Circulatory system
04260 Cardiac muscle contraction
111668912
04261 Adrenergic signaling in cardiomyocytes
111668912
04270 Vascular smooth muscle contraction
111668912
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
slal04040
]
111668912
Ion channels [BR:
slal04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
111668912
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
CAC1F_C
Motif
Other DBs
NCBI-GeneID:
111668912
NCBI-ProteinID:
XP_023280832
LinkDB
All DBs
Position
Unknown
AA seq
1782 aa
AA seq
DB search
MAANGEAAKPVIMNEEELKRKQREKLKKLQATGGNPRPARSLFFFTLKNPFRKACINIVE
WKTFEIIILLTIFANCVALAVFLPMPEEDSNNTNLSLESLEYIFLIIFTLECFLKIVAYG
LVFHEGAYLRNCWNILDFVIVFMGLVTFVMDTVHKISGVPIEKGGGFDMKALRAFRVLRP
LRLVSGVPSLQVVMNSILKAMLPLLHIALLVFLLVTIYAIMGLELFKCKMHKTCYYTDTN
IYATAEGELPAPCAQAGNGRRCIINGSECRPGWEGPNNGITHFDNIGFAMLTVYQCITME
GWTKVLYWINDAMGNEWPWLYFVPLILLGSFFVLNLVLGVLSGEFTKEREKARSRGEFQK
LRERQQLDEDLHGYMEWITHAEVLDADREGKGLLPLTSGDSDTDSLYDLEGKSQIVFYYR
LARRWNRFFRMKCLVYVKTKSFYWAVMFLVLLNTLTIATEHHHQPDWLTSLQDVASRVLL
VLFVIEMFVKMYALGPRAYFMSLFNRFDFFVVLCGILEMIMLSAGAVAPLGFSVLRCIRL
LRILKVTKYWTSLSNLVASLLNSVRSIASLLLLLFLFIVIFSLLGMQVFGGKFNFPDHRP
RRSNFDNFPQALISVFQILTGEDWTSIMYNGIMAHGGPDFPGILVAIYFIILFVCGNYIL
LNVFLAIAVDNLAEAESLTSAQKEKAEEKLRRKLLRSKMPDKTDEERERIAKKLAEQRAK
MEGIPTTAKLKVDEFESNVNEVKDPFPPADFPGDDEEEEPEIPISPRPRPMADLQLKEEA
VPLPEASSFFIFGPQNKFRKLCYKIINASSFTNLILLFILLSSISLAAEDPIDPKSYRNQ
ILAYADIVFTTVFTIEIVLKMTVYGAFMHKGSFCRNSFNILDLIVVGVSLLSMGMESSAI
SVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVLVTMLLNFMFACIGVQLF
KGKFYSCTDVSKLTGEECQGSFLKHMENSLQNTVVAKREWLNSDFNFDNVLYGMLALFTV
STFEGWPKLLYRAIDSDEEDMGPVFNNRVDVSIFFIIYIILIAFFMMNIFVGFVIVTFQE
QGEQEYQDCELDKNQRQCVQYALKARPLRCYIPKNPYQYRVWYIVTSSYFEYLMFFLIML
NTLCLGMQHCNQSDHVTKLSDMLNLIFTVLFTVEMILKLMAFKARGYFGDPWNVFDFIIV
IGSVVDVILSEVDTALASSGGLYCLHGCAETNPMQAIAASENASVSITFFRLFRVMRLVK
LLNRSEGIRNLLWTFIKSFQALPHVALLIVMLFFIYAVIGMQIFGKVALVDGTQINRNNN
FQTFPQAVLMLFRCATGEAWQEVMMASMYGKKCDPKSDFLPGEEHTCGSNFAVFYFLSFY
CLCAFLILNLFVAVIMDNFDYLTRDWSLLGPHHLDEFKKIWAEYDPEATGRIKHLDVVTL
LRRIQPPLGFGKFCPHRAACKRLVGMNMPLNSDGTVTFNATLFSLVRTALKIKTEGNFEQ
ANEELRAIIKKIWKRTSMKLLDQVIPPIGDDEVTVGKFYATFLLQDHLRKFLKTQEEYYG
YRPSKKNASGPEIQAGLRSIEEEAAPEMHRAISGDLQTEDEMDRAMEEAGEERIYQRTHG
LFGDRVDSFSAEPANAQSSHMTNQRPLKFSESQPESPPNSATLLPTTEFFPTTTPKSNTN
NNAFAEFSYEREGSPEEFYNPSEDAEPDNRRWSFTVKTGKTQFPYDPNYGDSQSQSSNTA
ADQLVQEVREEASLTAVLFCQIITADHLLAANVSIHCHIWHR
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaacggcgaggcggccaagccggtcatcatgaatgaagaggagctgaagagg
aagcaaagggagaagctgaagaagctacaggccacggggggtaaccctcgacccgcgaga
tccctcttcttcttcaccctcaagaaccccttccgcaaggcctgcatcaatatcgtagag
tggaaaacctttgagatcatcattctattgaccatctttgcaaactgtgttgctctggct
gtgttcctgcccatgcctgaagaagacagtaacaacacaaacttgagcttggagagtctg
gagtacatcttcctaataatcttcacgttagagtgctttctgaagatagtggcgtatggg
cttgttttccatgaaggcgcctatttacggaactgttggaacatattggactttgtcatc
gtcttcatgggccttgtcacctttgttatggatacggtccataagatatctggtgtgcca
atagagaagggtggggggtttgacatgaaggcactgagagccttcagagtgctacgaccc
cttcgcctcgtctctggagtccccagcctgcaggtggtgatgaactccatcctcaaggcc
atgctgcctctgctgcacatcgccctgctggtcttcttactggtcaccatctacgccatc
atgggactggagctcttcaagtgcaaaatgcataagacctgctattacactgacacaaat
atctatgctacagcagagggcgagctgcctgctccctgtgctcaggctggtaacggacgc
cgttgcatcatcaacggctctgagtgtcggccaggctgggaaggtcccaacaatggcatt
acccacttcgataacatcggctttgccatgctgactgtgtatcagtgtatcaccatggag
gggtggaccaaagtgctctactggattaatgatgccatgggaaatgagtggccctggctc
tactttgttcccctcattctgctgggctccttctttgtgctcaatctggtcctgggtgtg
ctcagtggagagtttaccaaagagagagagaaggcaaggtcacgtggagagtttcagaag
ttgcgagagcgtcagcagctggacgaagacctccatggctacatggagtggatcactcac
gctgaagtcctggatgccgaccgagagggcaaaggattgctgcctttgaccagtggagat
tctgacacagacagcctgtatgacctggaaggcaagagtcaaatcgtcttctactaccgt
ctggcccgtcgctggaatcgcttcttcaggatgaagtgcctggtttatgtgaaaaccaaa
agcttttactgggctgtgatgttcctcgttctcctcaacaccttgaccatagcaacagag
catcaccaccagcctgactggctcacttccctacaagatgttgccagtcgtgtactgctg
gtgctgtttgtcattgagatgtttgtgaagatgtatgctctcggtcctagagcatatttc
atgtctctgtttaaccgctttgacttctttgtggtgctatgcggtatcctggagatgatc
atgctgtctgcgggagccgtggctcctctgggtttctctgtactcaggtgtattcggctg
ctgaggatcctcaaagtcacaaagtactggacctctctaagtaatcttgtggcctccctc
ctcaactctgtccgctccatcgcctccctgctcctccttctcttcctcttcatcgtcatc
ttctcgctcctcggcatgcaggtttttggggggaaatttaactttcccgaccacagaccc
agacgcagtaactttgacaacttccctcaggccctcatcagtgtatttcagatcctaaca
ggagaggactggaccagcatcatgtataacggcattatggctcatggagggcctgatttc
cccggcatcctagtcgccatctactttatcatcctctttgtctgtggaaactatatcctc
ctcaatgtcttcttggccatcgccgtcgacaacctggcagaggcggagagtctgacttca
gctcagaaagaaaaggcagaagagaagttgagaaggaagctgctaaggtccaaaatgcct
gacaagactgatgaggagagggagaggatagctaagaaactggcagagcagagggccaag
atggagggaattcccaccacagccaagcttaaagttgatgagtttgagtccaatgtcaat
gaagtgaaagatccgttcccacctgccgactttccaggtgatgacgaggaggaagagcct
gaaatcccgatcagccctcggcccagaccaatggccgacctgcagctgaaggaagaagca
gttccattgcctgaagccagctccttcttcatctttggccctcagaacaagttccgaaag
ctgtgctacaagatcatcaatgcttcgtccttcaccaacttaatcctcctgttcatcctg
ctctcctccatctccctggcagctgaggaccccatcgatcccaagtcctacagaaaccag
atcctggcctatgctgacattgtctttacaactgtgttcaccattgagattgtactaaag
atgacagtgtatggagcgtttatgcacaaaggctccttctgccgtaactccttcaacatc
ctggatctgattgtggtcggagtctccctgctttctatgggaatggaatccagtgccatc
tctgtggtgaagattctcagggtgttgagggtgctgaggcctcttagggccatcaacaga
gcgaaagggttaaagcatgtggtccagtgtgtgttcgtggccatcaaaaccatcggcaac
atcgtcctggtcaccatgctgctgaatttcatgtttgcctgtataggagtgcaactcttt
aagggtaaattctacagctgcacagacgtgtccaaactgactggggaggaatgccaggga
tccttcctgaagcacatggagaattccctacaaaacaccgtggtggccaagagagaatgg
ctcaacagtgacttcaactttgacaatgtgctctatggcatgctggctctcttcactgtt
tccacatttgagggctggccaaaactcttatacagagccatcgattcagatgaagaggac
atgggtcctgtcttcaacaaccgtgtggacgtgtccatcttcttcatcatctacatcatc
ctcattgcgttcttcatgatgaacatctttgtgggctttgtcatcgtcactttccaggag
cagggcgagcaggagtatcaggactgtgagctggacaagaaccagcgtcagtgtgtgcag
tacgccctgaaggctcgtcctctgagatgctacatccccaaaaacccctaccagtacagg
gtctggtacattgtcacctcctcctactttgagtacctcatgttcttcctcattatgctc
aacaccttgtgtctggggatgcagcactgtaaccagtcggaccatgtgaccaagctgtca
gacatgctgaacttgatcttcaccgtgctcttcaccgtggagatgattctcaagctcatg
gccttcaaagcgaggggctactttggagacccctggaacgtctttgatttcattatcgtc
attggcagcgttgttgatgtcatcttgagtgaagtcgataccgccctggcctccagtgga
ggactgtactgtcttcatggctgtgctgagacaaatcctatgcaagcaattgcggcctct
gaaaatgcctccgtttccatcacgttcttccgactcttccgtgtcatgcgtctggtcaaa
ctgctgaaccgttcggagggcatccgtaacctgctgtggacgttcatcaagtccttccag
gctctccctcatgtagccctgctcatcgtgatgctcttctttatctacgctgtcatcggg
atgcagatctttggaaaggtagccttagtggacggcactcaaatcaaccgcaacaacaac
ttccagacattccctcaggctgttctgatgttattccgatgtgctactggtgaggcgtgg
caggaggtcatgatggcttcgatgtacggaaagaagtgtgaccccaagtctgacttcctg
ccaggagaggagcacacctgtgggtccaacttcgctgtcttctacttcctcagcttctac
tgtctctgcgccttcctgatcctcaacctgtttgtagctgtcatcatggacaactttgac
tacctgacccgggattggtctctcctcggcccccatcatctggatgagtttaagaagatc
tgggctgaatatgaccctgaagccacggggagaattaaacatctggatgtggtgacgctg
ctgcgacgcatccagcctccgctgggcttcggcaagttctgtcctcatcgtgctgcgtgt
aagcgtttggttggtatgaacatgcctctcaacagcgacggcaccgtcaccttcaatgcc
accctgttctctctggtcaggactgctctcaagatcaaaacagaaggtaactttgagcag
gccaatgaggagctgagagccattataaagaaaatctggaaacgcaccagtatgaaactg
ctagaccaggtcatccccccgataggagatgatgaggtgaccgtggggaaattctacgcc
accttcctgcttcaggaccatttacgcaaattcttgaagactcaggaggagtactacggc
taccggccctcgaagaaaaacgcctcaggcccggagatccaggcgggtctgaggagtata
gaggaagaggccgctccagagatgcacagggccatttcaggagacctgcagactgaggac
gagatggacagagcgatggaggaggctggagaagagagaatttaccagcgtactcacggc
ctgttcggcgaccgggtggactcgttctccgctgagcccgccaacgctcagtcctcacat
atgaccaaccagcggcccctcaagttctctgagagccagcccgagtccccgcccaactcc
gccaccttgttgcccactaccgaatttttccccacaaccacaccgaagagcaacactaac
aacaacgccttcgcagaattttcatatgaaagagaagggagtcctgaagagttttacaat
cctagtgaggacgcagagccagacaacaggcgctggagcttcacagtgaaaacaggcaaa
acgcagttcccttatgatcctaactatggtgacagccagagccagagctccaacactgca
gctgatcagctcgttcaggaggtaagagaggaagcatctctgactgccgtcctcttttgt
caaataataactgctgaccacctattagcagctaatgtctcgatccactgtcacatctgg
catcggtag
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integrated database retrieval system
