Seriola lalandi dorsalis (Yellowtail amberjack): 111669094
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Entry
111669094 CDS
T06058
Name
(RefSeq) laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04510
Focal adhesion
slal04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111669094
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111669094
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
F5_F8_type_C
LAMB1
EGF_Teneurin
Synaptobrevin
DUF4443
Motif
Other DBs
NCBI-GeneID:
111669094
NCBI-ProteinID:
XP_023281087
Ensembl:
ENSSLDG00000008453
LinkDB
All DBs
Position
Unknown
AA seq
1780 aa
AA seq
DB search
MSLIIHIITTLALWGPVTALMPEFADVCTEGSCYPATGDLLIGRAHKLTVSSTCGLRHPE
RFCIVGHLEEEKKCFVCDSRRMYDEDNNHVSHTIENVVTTFAHNRLKTWWQSENGVENVT
IQLDLEAEFHFTHLIMTFKTFRPAAMVIERSMDFGKTWQVYRYFAYDCKSSFPGVSSGPL
VKVDDIICDSHYSDIEPSTEGEVILRVLDPAFKIDDPYSVRIQNMLKITNLRVKFIKLHT
LGDNLLDSRDEVTEKYYYALYDMVVRGNCFCYGHASECAPMDGAPTGAEGMVHGRCVCNH
NTEGLNCERCQDFYQDLPWRPAEGRNTHACKKCECNHHSASCHFDLAVYMTTGNMSGGVC
DDCQHNTVGRQCEQCAPFYYQHPNRDLRDPAVCEPCNCDPDGSLQGGLCDSRNDVAAGLI
SGQCRCKANVEGERCDHCRMGHFGLGQGPEGCLPCTCNPLGTLSGGNSCDSGSGRCFCKR
LVDGHNCDQCLPQHWGLSNDMDGCRPCDCDQGGAVNNNCDPHSGQCVCREHMFGRRCDQV
ESGFYFIALDHYTYEAEDAEHGPGVTVVQRPYPLDRSPTWTGMGFVNVPEGAYLEFNIDN
VPESMDYDILIRYEPQLPEQWEQVNIRVQRPVVNAPNYSGHCRNSIQSGDEQTLSLPPGS
RHVLLVRPVCFEQGLNYTIRLSLPLYSSLSDVQSPYTLIDSLVLMPRIRELDMFHGIEGD
GAWDTFQRYRCLESSQSVVKSPMTDICNDYIFSVSALLHKGAMECQCDPQGSLSAVCESS
GGQCRCRPNVVGRNCDHCAPATFLFSPAGCRPCDCDPQGSVSAFCHEATGQCECVPGAAG
RQCSHCLPGFWGFPQCRPCHCNGHSEYCHPQTGECQGCRDFTTGHHCERCLSGYHGDPEL
GSGSHCRPCMCPDGPRSGRQFADSCYLLDYTNQLVCVCSSGYKGARCDQCAPGHFGNPLV
PGGRCLPCQCSNNIDMQDPGSCDVRTGACLKCRHHTDGYGCQHCKLGYYGNAGTQSCRKC
MCHSVGTVPQACSSPDECQCNQRTGQCPCQPNVVGQNCDRCTADTWNIAGGTGCQRCGCD
PVHSLSSSCNEVTGQCSCKPGFGGRTCRECRELFWGDPEVKCHPCDCDPRGISSEQCHRT
TGQCTCVEGVSGPRCDRCARGYQGEFPACEPCHQCFGIWDNVVGELTNQTRRLEAQVTEL
QTIGVTAPYKELIGSLERNSKAVRDIVESNPAAVKLEQIQDLMHQIIGLMSYLNGKLNTT
EETLNVLHDDANSTDVNLDTLTKEANQLEQSVQELRQQVYDAKNANIQGAMDTITEAHTQ
SMMAELKANASTSDPSNTVEQSATVRKATEDKLSSSQKEFDRKHQRNSQKLDKLSDEMDK
FDLAPLSEKTCGGAAEGDGCSGSPCGGLGCAGADGAPQCGGEGCQGLVTTSQTALKSAKD
LDQEILAAMQEVDKLSRMVWEANVRANEAKGNAMEVLVKSNRSKERVEQSNEQLRNLIKE
IRDLLMNDKADVTVIETVANEVMALEMPTSTEKLNELTKEIRERVGTLTSVETILSQSAD
DIQAAETLLKEAKAASEQASSMKETADVVKAALDETERAQNIAMDAIQLAQNNTKGTLDL
LISVESETAMSELKLSNTTSRLVQLEREVGLLRQNNLEVNRLAETADFITDQAKLEAEEA
QQEFDVEVKAKLEEVEDLVGDKGDSVLQARRKADELQQEAKELLVQSSSKLQRLGELEVS
YEANQRILEAKAAELAELEQTVRRILEEISHKVTLYSTCL
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcataatccacatcattacaactttggccctgtggggtcccgtcacggcgctg
atgccagagtttgcggatgtttgcaccgagggcagctgctatcccgccacaggtgacctg
ctgatcggccgcgcgcacaaactcaccgtctcctccacctgcggcctgaggcacccggag
cgcttctgcatagtcggacatcttgaggaggagaagaaatgtttcgtgtgcgactccagg
cggatgtacgacgaggacaacaaccacgtcagccacaccatcgagaacgtggtcaccacc
ttcgcacacaaccgcctgaaaacctggtggcagtcggagaacggtgtggagaacgtgacc
atccagctggacctggaggccgagtttcatttcacacaccttatcatgacgttcaagacg
tttcgtccggctgccatggtgatcgagcggtcgatggacttcgggaagacgtggcaggtt
tatcgttatttcgcctacgactgcaagtcctcgttccccggtgtgtcctccgggcccctg
gtcaaagtggacgacatcatctgcgactcccattactcagacatcgaaccgtccacagag
ggagaggtgattctacgagtcctggacccggccttcaagatcgatgacccctacagtgtg
cggatacagaacatgctgaagatcaccaacctccgggtgaagttcatcaagctccacacg
ctgggcgacaacctgctggactcccgcgacgaggtgacggagaagtactactacgccctc
tacgatatggtcgtccgcggaaactgcttctgctacggccacgcctccgagtgcgccccg
atggatggagcgccgacgggagccgagggcatggtccacggccgctgcgtgtgcaaccac
aacactgagggactgaactgcgagcgctgtcaagacttttaccaggatttgccttggaga
cctgcggagggacgaaacacccacgcctgcaagaagtgtgagtgtaaccatcactccgct
tcctgtcacttcgacctggccgtttacatgacgaccggcaacatgagcggaggcgtgtgc
gacgactgtcagcacaacacggtgggccggcagtgcgagcagtgcgcacccttctattac
cagcaccccaacagagacctgcgggaccccgccgtctgtgaaccgtgtaactgtgacccg
gacgggtctctgcagggcggactgtgtgattcgcgaaacgatgtggcggctgggctgatc
tcaggccagtgtcggtgcaaagccaacgtggagggcgagcgctgcgaccactgcagaatg
ggacacttcgggctgggacaggggcctgagggctgcctgccttgtacctgtaacccgctg
ggaactctgtcgggaggaaactcctgtgattcaggctccggaaggtgcttctgcaaacgg
ctcgtcgacggacacaactgcgatcagtgtctgccgcagcactggggtctgtccaatgac
atggatggctgcagaccatgtgactgtgaccagggcggggctgttaacaataactgcgac
cctcactcaggacagtgcgtgtgcagggagcacatgttcggacggcgctgcgatcaggtc
gagtccggcttctacttcatcgctctggatcactacacctacgaggccgaggacgccgag
cacggacccggtgtgacggtggtgcagaggccttaccctctggatcgtagtcccacgtgg
accgggatgggttttgtgaacgtgccagaaggagcgtacttagagttcaacatcgacaac
gtcccagagtccatggactacgacatcctcatccgctatgaaccacagctgccggagcag
tgggagcaggtgaacatcagggtgcagcgtcccgtcgtcaacgctccaaactactcaggt
cactgcagaaactccatccagagcggagacgagcagaccctctctcttccacctggatcc
agacacgtgttgttggtgaggccggtgtgtttcgagcagggactgaactacacgatccgc
ctcagtctgccgctctactcgtcactcagcgacgtccagagtccgtacacactcatcgac
tctttggtgctgatgccccggattcgggagctggacatgttccatgggatcgaaggtgat
ggagcgtgggatacattccagcgctaccgatgtctggagagcagccagagcgtcgtcaag
agccccatgaccgacatctgtaacgactacatcttcagcgtctccgctctgctgcacaaa
ggagccatggagtgccagtgtgaccctcagggttccctcagcgccgtgtgcgagtccagc
ggaggtcagtgtcggtgtcgacccaacgtggtcggcaggaactgtgaccactgcgccccg
gctacgttcctgttcagccccgccggctgcagaccgtgcgactgtgaccctcagggctcg
gtcagcgccttctgccacgaggccaccggccagtgtgagtgcgtccccggggccgcgggt
cgccagtgttcccactgcctgccgggcttctggggcttccctcagtgccggccctgccac
tgtaacggccacagcgagtactgccaccctcagaccggagagtgtcagggctgcagggac
ttcaccaccggacaccactgtgagagatgtctgagtggttaccacggtgacccagagctg
ggttcaggtagccactgtcgcccatgcatgtgccccgacggaccgcgcagtggacgccag
tttgctgacagctgttacctcctggattacactaaccagctggtgtgtgtgtgcagctcg
ggctacaaaggtgccaggtgcgatcagtgcgccccgggtcacttcgggaaccctctggtg
cccggcgggcgctgcttgccctgccagtgcagcaacaacatcgacatgcaagacccgggg
tcctgcgacgtccgcacgggcgcctgcctcaaatgccggcaccacaccgacggctacggg
tgccagcactgcaaactgggttactacggcaacgctggcacacagagctgcaggaagtgc
atgtgtcactcggtgggcacggtgcctcaggcctgttcctcccccgacgagtgccagtgc
aaccagcgcaccggtcagtgtccctgccagcccaacgtggtgggtcagaactgcgaccgc
tgcaccgccgacacgtggaacatcgccggcgggacgggctgccagcgctgcggctgcgac
cccgtccactccttaagctcctcctgcaacgaggtcacgggacagtgctcgtgcaaaccc
gggtttggtggcaggacgtgtcgggagtgcagagagctgttctggggggatcctgaagtg
aaatgtcacccttgtgactgcgatcctcggggaatctccagcgagcagtgccatcgcacc
acaggtcagtgcacctgtgtggagggtgtttccggccctcggtgcgacaggtgcgccaga
ggctaccagggggagttccccgcctgcgaaccctgccaccagtgcttcggcatctgggac
aacgtggtcggcgagctgaccaatcagactcgacgtctggaggcccaagtgacggagctc
cagaccatcggggtgacggcaccgtataaagagttaatcggcagcttggagagaaactcc
aaggctgttagagacatagtagaaagcaaccctgcagcggtgaagctggagcagatacag
gacctaatgcaccagatcattggtttgatgtcctacctgaacggaaagctgaacacgacg
gaggaaaccttgaacgttctccacgatgacgccaactccaccgacgtaaacttggacaca
ctgacgaaggaggccaaccagctggagcagagcgtccaggagctgagacagcaggtgtac
gacgccaagaacgccaacatccagggtgccatggacacgatcacagaagcacacacgcag
tctatgatggcggagctcaaggccaacgcctccaccagtgatcccagtaacacagtggag
cagtccgccaccgtacggaaagccacggaggacaaactgagcagcagtcagaaggagttc
gaccgcaagcaccaaagaaactcgcagaagctggacaagctgtccgacgagatggataag
tttgacctggcaccacttagcgagaagacgtgtggtggtgcagctgaaggtgacggctgc
tccggctccccctgcggtgggttgggttgtgccggcgcagacggagctcctcagtgtgga
ggagaaggatgccaaggcctcgtcacaacctcccaaactgctctcaaatcagccaaggac
ctggaccaggagatcctagcagcgatgcaggaggtggacaagctctccaggatggtgtgg
gaagccaacgtccgtgcaaacgaggccaaggggaacgctatggaggtgctggtcaaatcc
aaccgcagcaaggagagggtggagcagagcaacgagcagctccgcaacctcatcaaagag
atacgagacctcctcatgaatgacaaggcagatgtgacagtgatcgagacggtggccaac
gaggtcatggctctggagatgccgacctcgacagagaagctgaacgagctgacgaaggag
atcagggagagggtgggcaccctgaccagcgtggagaccatcctgagtcagagcgctgat
gacatccaggctgccgagacgctgctgaaggaggccaaggctgccagtgagcaggcgtct
agcatgaaggagacagcagacgtagtgaaggcagccctggatgagactgagcgtgctcaa
aatatcgccatggacgccatccaactggcccagaacaacactaaaggcaccctggacctg
ctgatctctgtggagtcggagacggccatgtcggagctgaagctcagtaacaccacaagc
cgtctggttcagttggagagggaggtcggcctgctgaggcagaacaacctggaggtgaac
cggctggcggagacggccgacttcatcaccgaccaggccaaactggaagcagaggaggcc
cagcaggagtttgacgtggaggtgaaagctaaattggaggaggtggaggacctggtgggg
gacaaaggagactcggtgctgcaggcgagaaggaaagcagatgaactgcagcaggaggcc
aaagagctgctcgtccagagcagcagcaagctgcagagactcggagagctggaggtctcc
tacgaggcgaaccagcgcatcctggaggccaaagctgcggagctggccgagttggagcaa
accgtccgcaggatcctggaggagatcagccacaaagtgactctgtacagcacctgtctg
tga
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