Seriola lalandi dorsalis (Yellowtail amberjack): 111669129
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Entry
111669129 CDS
T06058
Name
(RefSeq) rho guanine nucleotide exchange factor 18-like isoform X1
KO
K21066
A-kinase anchor protein 18
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
111669129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slal04131
]
111669129
Membrane trafficking [BR:
slal04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
111669129
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
PH_16
PH
RdDM_RDM1
Motif
Other DBs
NCBI-GeneID:
111669129
NCBI-ProteinID:
XP_023281134
Ensembl:
ENSSLDG00000011115
LinkDB
All DBs
Position
Unknown
AA seq
961 aa
AA seq
DB search
MDDVDGLRLKLSSEDSVSLASSLTDPINLEDSHYARLQGELESDAQNLEAESWSVAVEQS
YLKTLNKEAVKRQDVIYELIQTEMHHVRTLKILLHVYVHELRQSQLIEEGRLERLFPRVE
TLLTFHQHFLNCLKARQNQSQEEGSPNNYQITQLGDILISQFSDALGEGMMECYSVFCRH
HNEAISFYKEQLQSNKKLQILIRKLGQLPLVRRLGIPECFLLVTQRITKYPVLVERIIQN
TEADTDEHKSLVQGLERIKDTISEVNDQVSEYEKFVRLREIGLRLEPKSQGRQKDGQLFR
REDLIQGNGTLLREGAVTWKSSGRQKDIHAVLLSDVLLLLQEKDQKLVFAAVDNKPPVIS
LQRLIVREVAHEDKAMFLICACTTSLPEMYEIHTGSREDRITWTALIRQAVEHYPQKELQ
RELIAKLQHCQDALKERDDQIIQSLTEKQQIFAALYENAMEQETPHKGLLLRGDATDLQQ
GGALLKGAIDEVENLLNLLLSKIRDPDLVMDDIKMQGELLRRAETFGAGDSDSYENTMKN
GNVAERPGSSEGSQVHLSHTTEINCPEGLEQSVSQADDETFPVPNCSSASTHLPEAEVYN
KVMMLIRMLYSLKAVIAQQDSQIELQRAFQTASQQPARHYSNVLLEQEKQRNLEKQKAEL
ANLYKLQAQHQEAQQRWEKERERQRIQIETLEAQVQQREEDCRKWEEKLNGEKAELETQR
ENYQQDLERLRESTKSVEKEQERNAQERERLEKLKSKYIPNPGHSNYDDPAQSWNLSSYP
SFRGSIVNGFGNQTFTPKPITSNLMEIPPKVPPRKESISPQPVKPELPVHLISTTNQVHK
PPAVHQKIPTKLATLPKGKEKALKMKGSHQRTHSAASIDVNQVLPIRVTGKEGGSLRAKR
NGSPQRIYHSDTFKLPGSVHSVKMSQSFSTHKRSSNEAPPPAPPPFPKDVLEMGKEKVIF
L
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgtggatggcctgcggttgaagctctcctctgaggactctgtgtcactggct
tcctccttgactgatcccatcaacctagaagattcccattatgctcggctgcaaggtgag
cttgagtccgatgcccagaacctggaggcggagtcctggagtgtggctgtggagcagagc
tacctgaagaccctgaacaaagaggctgttaaaagacaagatgtcatctacgagttgatc
cagacggagatgcaccatgtacgcaccttgaaaatccttctccatgtctacgtgcatgag
ttgaggcaatctcagctgatcgaggaaggcaggctggagcggctcttccccagggtggaa
acgctcctcaccttccaccagcacttcctcaactgcctcaaggcacgccagaaccagagt
caggaggaaggcagcccaaacaactaccagataacgcagctgggggatatcctcatctct
cagttttcagatgcactgggagaaggaatgatggagtgttacagtgttttctgtcggcat
cacaatgaagccatcagcttctacaaggagcagctgcagagcaacaagaagctgcagatt
cttatcaggaaattgggtcagctgcctctagtgcgaaggttgggaatccctgaatgtttt
ctgttggtgactcaacgcatcacaaaatatcctgtcctagtggaacgaatcatccagaac
actgaagctgacacagacgagcacaagtctctggtacagggtttggagcggatcaaagac
accatttctgaggtgaacgatcaggtcagtgaatatgaaaaatttgttcgtctgagagag
atcggcctgcgtttggagccaaaatctcagggccggcagaaggacggccagctgttccgc
agagaggatctaatccaaggaaacgggacgctgctgcgcgaaggcgccgtcacctggaag
tcctccggtagacagaaagacatccatgctgtgctgctgtcagatgtgctcctcctctta
caagagaaggatcagaagcttgtatttgctgctgtggacaataaaccaccagtgatctcc
cttcaaaggctgatagttagagaagtagcccatgaagacaaagccatgttccttatctgt
gcctgcaccaccagcttgccggagatgtacgagatccacacaggctccagagaggatcgc
atcacctggacggccctcatacgacaagctgtggaacactatcctcaaaaggagctgcag
cgcgaactgattgctaaactgcagcattgtcaagatgctcttaaggagagggatgaccag
ataatacaaagtctgacagagaagcagcagatctttgctgctctctacgagaacgcgatg
gagcaggagacaccccacaaagggctgctgctccgaggagatgctactgacctccagcag
gggggggcgctgctcaaaggagccatagatgaggtggaaaacctgctgaacctgctcttg
tcaaagataagagacccagaccttgtaatggatgacattaagatgcagggggagctgctc
aggcgggccgagacctttggagcgggtgacagtgactcctatgaaaacaccatgaaaaat
ggaaatgtagctgagaggccaggtagcagcgagggcagtcaagtgcacctcagccacacc
acagaaataaactgtcctgaaggcctggaacagtctgtgagtcaagctgatgacgagaca
ttcccagtgccaaactgcagttcagcctccactcatctccctgaggcagaggtgtataac
aaggtgatgatgctcataaggatgctctacagcttaaaggcagtcatcgcccagcaggac
agccagattgaactgcagcgcgcttttcaaacagccagccagcagcctgctcgtcattac
agcaatgtgctgcttgagcaggagaagcagcgcaacttagagaagcagaaggccgaactc
gccaacttgtacaagctacaggctcagcatcaagaagcacagcagcgctgggagaaggag
agggagcggcagaggatacagattgagactctggaggctcaagtgcaacagagggaggag
gactgcaggaaatgggaggagaagctgaatggggagaaggccgagctggagacgcagcgg
gaaaactaccagcaggacctggagaggctgagggagtccacaaaatcagtggaaaaggag
caggagcgaaacgcacaggagagggagcgtttggagaagttaaagtcaaagtacatccca
aacccaggacactccaactatgatgatcctgctcaaagctggaatctctccagttaccca
tcattcaggggaagcatagtgaatggatttgggaatcagacctttactccaaagcccatc
acttccaatctcatggaaattcctccaaaagttccaccacgcaaggagagcatcagcccc
cagcctgttaaacccgagctgcccgtccacctgatcagcaccaccaaccaggtgcacaaa
cctcctgccgtgcatcagaagatccccaccaagctagctactctgcccaagggaaaggag
aaggccttaaagatgaaggggtcccaccagaggacgcacagtgcagcctctatagatgtt
aaccaggtgctgcccatccgagtgacggggaaagaaggcggcagtctgagagccaagagg
aacggcagccctcaaaggatctaccattcagatacgttcaaactgccaggatctgtccac
agtgtgaaaatgtctcagtccttcagcacacacaagcggagcagcaacgaggctcctcca
ccagcaccacctccgttccccaaagatgttctggaaatgggcaaagagaaggtaatcttc
ctttaa
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