Seriola lalandi dorsalis (Yellowtail amberjack): 111669469
Help
Entry
111669469 CDS
T06058
Symbol
btaf1
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slal03021
]
111669469 (btaf1)
Transcription machinery [BR:
slal03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
111669469 (btaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
HEAT_2
Vac14_Fab1_bd
TPR_Trm732_C
HEAT_MROH2B_C
HEAT_GCN1_C
HEAT_GCN1
HEAT_EZ
ARM_TBCD_2nd
Motif
Other DBs
NCBI-GeneID:
111669469
NCBI-ProteinID:
XP_023281550
Ensembl:
ENSSLDG00000021505
LinkDB
All DBs
Position
Unknown
AA seq
1857 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLTYLRSPNWDTRI
AAGQAVEAIVKNIPEWDPAPKPKEESCEDLSPEDSSCDRLSFYHFDISRLLKHGASLLGS
AGAEFELQDDKTGEMDPKERLARQRKLLQKKLGLDMGAAIGMDTEELFNDEDLDYNCQPT
GLRAHGSKATAGSSSRNHVPIHAAELIDSEFRPGMSSRQKNKAKRMAKLVAKQRSRDMDP
NEKSNDSFEGEPEEKRRKTTNVVIDQPATEHKVLIDNVPDNSNLLEEIHEWPLESFCEEL
CNDLFNPSWEVRHGAGTGLREILKSHGAGGGKLVGSTGEQMLRQHQEWIEDLVIRLLCVF
ALDRFGDFVSDEVVAPVRETCAQTLGVALRHMNETGVSMTVDVLLNLLKEDQWEVRHGGL
LGIKYALAVRQDLISVLLPRVLPAITVGLQDLDDDVRAVAAASLIPVVEGLVQLLPNKVP
FIVNTLWDALLDLDDLTASTNSIMTLLSSLLTYPQVRQCSMQQSLTVLVPRVWPFLRHTI
SSVRRAALETLFTLLSKADQSCALWINPILQDMLRHIFQSCILESNEEILELIQKVWMEL
LSQAPHQYVVAASCPWMGAWLCLMMQASHIPIDLNMLLEVKARSKDKAGTKARQGTNQVK
ETVQEYIAGAETVTDDPVTRDYVVVRARLMAAKLLGALCRCICDPQLNAASQEIRPAESL
GHLLLFHLNSKSALQRIAVALVLCEWAALQKDCQVVSSMVQPRLLAILSEQLYYDEIAIP
FTRMQNECKQLIALLADAQIDLQDRLNCSVFTIDQANELVTTIFTESTAGLNVKSKQWQA
LDSKRQQAQATVLETSTEWQQLHLRVHMFTACAVINLQVLPDKLNPLVRPLMEAIKREEN
TLIQGYAASFIAKLLQQCAGRSPCPNPKIIKNLCASACVDSSVTPSSACPVPPTQENAKG
GGLEKDGMHHMVNKTRGIITLYRHQRAAFAITSKRGPAPKAPKTPSTELPPGSTISTDND
ESKKPFLIQRRGAEFSLTTVARHFGVDLTKSLPYLWENTVGPLRTAVTANQCIDRQVQLE
RGDTAAQELVNSLQVLEVMAGAMASELKPLLLEHLSHLFTCLQHPYTAVRHMAARCVGVL
SKIATLETMNSFLECVLPWLAAIDDCTKQEGAIEALACVMEQLDVDIIPYIVLLVVPVLG
RMSDPSDSIRFMATQCFATLIRLLPLEAGIPDPPAMSADLIRQKARERHFLEQLLDGRKL
ENYKIPVPIKAELRKYQQDGVNWLSFLNKYKLHGILCDDMGLGKTLQSICILAGDHYLRA
QEYAKTKAADCSPMPSLVVCPPTLTGHWVDEVSKFCSKEYLNPLHYTGPPTERMRLQHQV
KKHNLIVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAIKQLAANFRVILSG
TPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDAKSSSREQEAGVLAMEALH
RQVLPFLLRRMKEDVLQDLPPKIIQDYYCNLSPLQVQLYEDFAKSRAKASVEDSISIAST
EEEEKPKLKATGHVFQALQYLRKLCNHPSLVLTVQHPEYKRISEQLASQNSSLRDIQHAP
KLSALKQLLLDCGLGGGGGSEGGTEAVVAQHRVLIFCQLKSMLDIVEHDLLKPKLPTVTY
LRLDGSVQAGLRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDL
QAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMSIANTIISQENTSLQSMGTDQL
LNLFTLDKDNKGEKGEQTASTSGKASMKSVLDGLGELWDQQQYDTEYNLDSFMHSLQ
NT seq
5574 nt
NT seq
+upstream
nt +downstream
nt
atggctgtatcaagacttgatcgtttgtttatcctgcttgacaccggaacaacaccagta
accaggaaagcagcagcccagcagcttggagaagtggtcaaactccacccacatgaactc
aacaacctcctatcaaaagtcttgacctacctaaggagtcccaactgggacactcgtata
gcagcaggccaagctgtagaggccattgtgaagaatattcctgagtgggacccggcaccc
aagcctaaagaggagtcttgtgaagacttgtcaccagaggactcctcctgtgaccggttg
agtttctaccactttgacatctcccgccttctcaaacatggggcctctctgctgggatct
gctggggcagagtttgagctacaggatgacaaaactggtgagatggaccctaaggaacgc
ttggctcgccagaggaagcttcttcagaagaagttgggtctggacatgggtgctgctatt
ggaatggacacagaggagctgttcaatgacgaggaccttgactataactgtcaacccact
ggtcttagagcccatggaagcaaagctacagctggatccagctcccgcaaccatgtacct
attcatgctgctgagttgatagactcagagttccggccaggcatgagcagtcgtcagaag
aataaggctaagaggatggctaaactagtggcaaaacaacgatccagagacatggatcca
aatgaaaagagtaacgatagttttgagggtgaacctgaagagaaaagaagaaaaaccacc
aatgtagttattgaccaaccggcaacagagcataaagtcttaatcgacaacgttccagat
aactccaatcttttagaagagatacatgagtggcctctggagagtttctgtgaggagcta
tgcaatgacctcttcaatccttcatgggaggttcgtcatggtgctggtacaggtcttaga
gaaatccttaagtcccatggtgctggtggtggaaagctggtgggaagcactggagaacag
atgttgcggcagcatcaggagtggatagaggacctggtcatccggctcctctgtgtcttc
gctctagaccgctttggggattttgtatctgatgaggtggtggctcctgtcagggagacg
tgtgcccagacactcggcgtggcccttcgccacatgaatgaaactggtgtttccatgaca
gtagatgtcctgctgaatctgcttaaagaggaccagtgggaagtccgtcatggaggactg
ctagggatcaaatatgccctggccgtccgacaggacttgatctctgtcttactgccccgg
gtgctcccggccatcactgtaggcctgcaggacctagatgatgatgtcagagccgtggca
gctgcatccctcatccctgtggttgaaggcctggtacagctactgccaaataaggtaccc
tttatagtgaacacactatgggatgctcttttagacctggatgacctcactgcttccacc
aacagcatcatgacattgctgtcatcactgctcacctatccacaggtccgacagtgcagc
atgcagcagtcactaacagttctggttcctcgggtttggccattcttgagacacactata
tcatcagtacgacgtgcagcactggaaacccttttcactctgctgtctaaggctgaccag
agctgtgcattgtggatcaaccccatcctacaagatatgctccggcacatcttccagtcc
tgcatactggagagcaatgaggaaatccttgaactgattcaaaaggtgtggatggagctg
ctgtctcaggcgccacatcagtacgtggtagcagccagctgtccatggatgggtgcctgg
ctctgtctcatgatgcaggcctcacacattcctattgacctgaacatgctgctggaagtg
aaagcccgctccaaggacaaggctggtacaaaggcacgccaggggaccaatcaggtgaag
gaaacagtccaggagtacatagcaggtgcagagacggtgacagatgacccagtgacgagg
gactatgtagtggtgcgagctcgcctcatggctgccaaattgctcggggctctgtgtagg
tgtatctgtgaccctcagctcaacgctgcatctcaggagatccgaccagctgagtcttta
ggccatctgttgctcttccacctcaactccaagtctgccctgcagcgcatagctgtggct
ctggtgctttgcgagtgggctgcactgcagaaggattgtcaggtggtgtcatccatggta
cagcctcgtcttctggcaattctgtctgagcagttgtactatgatgagattgccatcccc
ttcacacgcatgcagaatgagtgcaagcagctcattgctttgctagctgatgcccaaata
gaccttcaagaccgcctcaattgtagcgttttcaccattgaccaagccaatgaactggta
accaccatctttacagagtcaacagcaggtctgaatgtgaagtctaaacagtggcaggcg
ctggacagtaaacgacaacaggctcaggcaacagtgctggagaccagcacagaatggcag
cagctgcatttgcgcgtccacatgttcacggcctgtgcagtgattaacctgcaagtgctt
cctgacaagctcaacccactggtcaggcctttgatggaggccatcaagcgagaggagaac
accttgattcagggttatgctgcttcttttatagccaagctgttgcagcagtgtgctgga
cgctcaccatgccccaaccccaagattatcaaaaacctctgtgcctcggcctgcgtggac
tcttcggtcacaccctcgtctgcttgccccgtaccccccacacaggaaaatgcaaaaggt
ggagggttagagaaagacggcatgcatcacatggtcaacaaaacccgtggcatcattaca
ctataccgccaccaaagggcagcatttgcaatcactagtaagagggggccagcacctaaa
gccccaaagaccccttccacagagcttcctcctggcagcactatcagcactgataatgac
gagagcaaaaagccatttcttattcaaagaagaggggcagagttttccttaacaactgtt
gccaggcactttggtgtagacctcaccaagtctctgccgtacctctgggagaacacagtg
ggaccactcaggacagcagtgactgcaaatcagtgcattgataggcaggtccagctggag
aggggagacactgcagcccaagaactagtcaactctctgcaagttctggaggtcatggct
ggggccatggcttctgaactcaaacctttgctgttggagcacctatcacatctgttcacc
tgcctgcagcacccgtacacagcggtgcgtcacatggcagcacgttgtgtgggtgtgctc
agtaagatagccacgctggagaccatgaacagtttccttgagtgtgtactcccctggtta
gctgctattgatgactgcaccaaacaggaaggtgccatcgaggctttagcctgtgtgatg
gagcagctggatgtggacatcataccctacattgtgctgctggttgttccagttctgggc
cgtatgagcgaccccagtgatagtattcgtttcatggccacccagtgttttgctacactc
atccggctgctgccactagaggcgggtataccagaccctccagccatgtctgctgacctc
atccgtcagaaagccagagaacgccacttcctggagcaactgctagatggaagaaagttg
gagaactataagatccctgtgcccattaaggctgagctcaggaagtaccagcaggatgga
gtgaactggctgtccttcctgaacaaatacaagctgcatgggatcctgtgtgacgacatg
ggactcggcaagacgctgcaatccatctgcattctggcaggagatcactacctcagggct
caggaatatgccaagaccaaggctgcagactgcagccccatgccctccctggtcgtatgt
ccccccacacttactggacactgggtggacgaagtgagcaagttctgcagtaaagaatac
ctcaacccgctgcactacacggggccgcctacagaacgaatgcggttgcaacaccaagtg
aaaaaacacaatctcatagtagcctcttatgatgttgtacggaatgacattgactttttt
agaaatatcaaattcaattactgtattcttgacgagggtcatgtcatcaagaatgggaaa
accaagctttccaaagccattaagcagttggctgccaacttccgagtcatcttgtcagga
acacccattcagaacaatgtcctggagctctggtcattgtttgacttcctcatgccgggc
ttcctgggaacagagcggcagtttgctgctcgctacggtaaaccgatcctggctagtcgt
gacgccaaaagttcctcaagggaacaggaggcaggtgtcctggcaatggaggccctacat
cggcaggtgctacccttcctgctgaggaggatgaaggaggatgtcctccaggaccttcct
cctaaaatcattcaggactattactgcaacctgagtcctctacaggttcagttgtatgaa
gactttgcaaagtctcgagccaaggccagtgtggaggacagcatctccattgcctctaca
gaagaggaggaaaagcccaaactgaaggccacaggccatgtcttccaggcgctgcagtac
ctgcgaaagctgtgtaaccacccgagcttggtgttgactgtgcagcatccagagtacaaa
cgcatctctgagcagctggcaagtcaaaactccagcctacgggacattcagcacgcgccc
aaactctctgctctcaaacagttattgttggactgtggtcttggtggaggtggaggatcg
gaggggggcactgaggcagtggtggcccagcatcgtgtgctgattttctgtcagctgaag
agtatgctggacattgtggagcatgacctgctgaaacccaaactgccgactgtcacttac
ctgaggctagatggcagcgtgcaggccggcctgcgccattctatcgtctccaggtttaac
aatgacccatccattgacgtgctactgctgaccacccatgttggtggtctgggtctgaac
ctgacaggagcagacactgtggtgtttgtggaacatgactggaaccccatgagggatctg
caggccatggacagagcccataggataggacagaaacgggtcgtgaacgtgtacaggctg
atcacacgaggcacactagaggagaagataatggggctgcagaaattcaagatgagcatc
gccaacacgatcatcagccaagagaacacaagtctgcaaagcatgggcacagaccagctc
ctcaacctcttcaccctcgacaaggacaataagggtgagaagggtgagcagacggcgtcg
acctcagggaaggcctcgatgaagtcggtgctggatggcctgggagagttgtgggaccag
cagcagtatgacacggagtacaacctggacagcttcatgcactccctgcagtaa
DBGET
integrated database retrieval system
