Seriola lalandi dorsalis (Yellowtail amberjack): 111669495
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Entry
111669495 CDS
T06058
Symbol
papolg
Name
(RefSeq) poly(A) polymerase gamma isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111669495 (papolg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slal03019
]
111669495 (papolg)
Enzymes [BR:
slal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
111669495 (papolg)
Messenger RNA biogenesis [BR:
slal03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
111669495 (papolg)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
DUF4269
Nrap_D2
GH97_C
Motif
Other DBs
NCBI-GeneID:
111669495
NCBI-ProteinID:
XP_023281584
Ensembl:
ENSSLDG00000001217
LinkDB
All DBs
Position
Unknown
AA seq
833 aa
AA seq
DB search
MKEMSSTMPGGQQPQKHYGITSAISLAPPREIDHQYTKKLCDAMKPFGVFEDEEELNHRL
AVLGKLNNFVKEWIAEISELKNLPPSAISCVGGKIFTFGSYRLGVHTKGADIDALCVAPR
HVERSDFFQSFFEKLKQHEEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNL
DLRGDSILRNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLG
FLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDP
RVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTIMSEEFKYGLSVTDEILQGKAEWSKLF
EPPSFFQKYKHYIVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFP
GSKENRNENDFVSMWFIGIIFKKVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMK
IEATHVKKKQLHQYLPPELVQKKKRSIAELNRSSNGGSSKRISLDSSHLDSSRDTDSGTP
FSSPANKPSKPASDTDDGASPPKQLFVEGSPSPSAAPAAKDQGMSIPVIGSKPPVKVKPP
SPPASSSVTPVPSVSVKPNATSSPREEPNGLEDSVNGAPAKRPHSPTQEDLAKRLKDAEV
VSNDDSIFKEPYPPSSDSLPPGEGPNITPISGSKAKPIPTIDTSRTQRLPSMELPDASSP
LPASNSCRVVKNSIKLALNRHNITPPKPPVFEGTLTTDTPPASEEKGMSIPVIGSKHVAS
KHVAPPVGSSIPTLVSRGADPLNGAASKRPHSPSLEEQAKRLKETEKARIHIA
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaatgtcaagcaccatgcctggtgggcagcagcctcagaaacactatggcatc
acctctgccattagccttgcacctccacgagaaatagaccaccagtacaccaagaaactc
tgtgatgctatgaaaccttttggggtatttgaagacgaagaggaattgaatcatagactt
gcagttcttgggaagttgaataactttgttaaagaatggattgcagagatcagtgaatta
aagaatctaccaccatcagctattagctgtgttgggggcaagatatttacatttggttcg
taccgccttggggtgcacacaaaaggagctgatattgatgccttatgtgtggctccacgt
catgtagagagaagtgactttttccagtctttctttgagaaattgaaacagcatgaagag
atcaaagacttgagggctgttgaggatgcttttgtacctgtgataaaattcaaatttgat
ggaatagagattgacctgctttttgccagactggccttacaatccattccagacaacctg
gacctgaggggagactccatcctgagaaacttggacattcggtgtatccgcagccttaat
ggctgtcgagtgactgatgaaattttgtacctggtgccaaacaaagaaaacttcaggttg
acactgagagccatcaaactgtgggcaaaacgtcgtgggatctactccaacatgctgggg
tttctgggtggagtgtcatgggccatgctggtggccaggacctgtcagctctacccaaac
gctgtagctgccacactcgtccacaagttcttcttggttttctctaaatgggagtggcca
aatcctgtgttactgaaacagcctgaggacagtaatctgaatttacccgtgtgggatcct
agagtgaacccgtctgacagataccacttgatgcccatcatcacacctgcctatccccag
cagaactccacctacaacgtctccacatcaacacgcacaatcatgagcgaagagttcaaa
tatgggctcagcgtcacagatgagattcttcagggaaaagcagaatggtccaaactcttt
gagccgcccagctttttccaaaagtacaagcattatatagttttgactgccagtgcgtcc
acagaagaaaaccacttggaatggatcggtctggtggagtcaaagatccgcgttcttgtg
ggaaacctggagaggaacgagtacatcaccctggctcatgtcaacccccagtccttcccc
gggtccaaagagaaccggaacgagaacgactttgtgtccatgtggttcattgggattatc
ttcaagaaagtggagaatgcagagagtgtgaacattgacctgacatatgacatccagtcc
ttcacagacactgtgtacagacaagccaacaacatcaacatgctgaaggatgggatgaag
attgaagcaacacatgtaaagaagaaacagctccatcagtatcttcctcctgaactggtg
cagaaaaagaagaggagcatagcagagttgaaccgtagctctaatggcggaagctctaag
cggatctctctggacagcagtcatctggacagctccagagacacagactcggggactccc
ttcagctccccagccaacaaaccctccaagcctgcatcggacacagatgatggtgccagc
cctcccaagcagcttttcgtggaaggctccccatcacccagtgcagcaccagctgctaaa
gaccaaggcatgtctatccctgtcattggctcaaagcctccagttaaagttaagcctcct
tccccaccagccagcagctctgtcaccccagtgccgagcgttagtgttaagcccaatgcc
accagcagccccagagaggagcccaacggcctggaggactctgtcaatggagctcccgcc
aagagaccacactcacctacacaagaggacctggccaagaggctcaaagatgcagaggtg
gtgtccaacgatgactctatatttaaagagccatatccaccatcctctgactccttaccg
cctggagaaggacctaatattacccctatttctggatcaaaggctaagcccattccaacc
attgatacctcaagaacacagagacttcccagcatggagctgccagacgcctcctcgcct
ctcccagccagcaacagttgtcgtgttgtgaagaattcaattaaactggccctcaatcgc
cacaacatcacacctcccaagcccccagtatttgaggggaccctcaccactgacactcct
cctgccagcgaagagaagggcatgtccattcctgtcattggctcaaaacatgtggcatcc
aaacacgtggcgcctcccgtcggcagctccatccccacattagtgagcagaggagctgac
ccactgaacggagcagcctccaagagaccccactccccctctctggaagagcaggccaag
aggctgaaagaaacagagaaggccagaatccacatagcttga
DBGET
integrated database retrieval system
