Seriola lalandi dorsalis (Yellowtail amberjack): 111669599
Help
Entry
111669599 CDS
T06058
Symbol
atg4b
Name
(RefSeq) cysteine protease ATG4B isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04136
Autophagy - other
slal04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111669599 (atg4b)
04136 Autophagy - other
111669599 (atg4b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
slal01002
]
111669599 (atg4b)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slal04131
]
111669599 (atg4b)
03029 Mitochondrial biogenesis [BR:
slal03029
]
111669599 (atg4b)
Peptidases and inhibitors [BR:
slal01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
111669599 (atg4b)
Membrane trafficking [BR:
slal04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
111669599 (atg4b)
Mitochondrial biogenesis [BR:
slal03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
111669599 (atg4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
111669599
NCBI-ProteinID:
XP_023281744
Ensembl:
ENSSLDG00000004171
LinkDB
All DBs
Position
Unknown
AA seq
397 aa
AA seq
DB search
MDAATLTYDTLRFGEFEDFPETSEPVWILGKEYNALTEKDEILSDVTSRLWFTYRKNFPP
IGGTGPTSDTGWGCMLRCGQMILGEALVCRHLGRDWRWARDQKQREEYISILNAFIDKKD
SYYSIHQIAQMGVGEGKPIGQWYGPNTVAQVLKKLAVFDTWSRLVVHVAMDNTVVIEEIK
RLCMPWLDIAGEAEGMGELNGCLEGACALAEEETALWKPLVLLIPLRLGLSDINEAYIET
LKQCFMLPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPCEDSQVPDETYHCQ
HPPCRMHICELDPSIAAGFFCRTEDEFDDWCMRLRRLSCKRGGLPMFELVDSQPSHMVSV
DALNLTPDPLSFADFSDSDRLERFFDSEDEEFEILSL
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagctaccttgacatacgacacacttcgctttggagagtttgaagattttcct
gagacctcagagcctgtgtggatcttagggaaagaatataatgcactcacagagaaagat
gagattttatcagatgtcacttcacgactttggttcacatacagaaaaaacttccccccc
attggtgggacaggaccaacatcagatacgggatggggatgtatgttacggtgcggacag
atgatcctgggcgaggccttggtgtgtagacatttaggcagagactggagatgggccaga
gaccagaaacaaagagaagagtacatcagtattctcaacgccttcattgacaaaaaagac
agctattattccatccatcaaattgcccaaatgggagttggagagggaaagcctataggc
cagtggtatggaccaaacacagtcgcccaggttcttaagaagctggcagtgtttgatacg
tggagcagattagtggtacatgtggcgatggacaacactgtggtcatcgaggagatcaag
cgtctctgtatgccctggctggatattgcaggagaagcagagggaatgggggagctcaac
ggctgccttgagggcgcatgtgccctggctgaggaggagacggctctctggaaacctctg
gtactgctcatccccctcaggctgggcctgagtgatataaatgaggcctacattgaaacc
ctcaagcaatgcttcatgctgcctcagtccctgggtgttattgggggaaaacccaacagt
gcccattacttcattggttatgtcggagaggaactcatctatttagacccacacaccaca
cagcctgcagtggagccgtgtgaagacagccaggtccccgatgagacgtaccattgtcag
cacccaccctgtcgtatgcacatctgtgagctggacccatccatcgcagcgggtttcttc
tgcagaacagaggacgagtttgatgactggtgtatgcgcttaagaaggctgtcctgcaaa
agagggggcctgcccatgtttgaactagtagacagtcagccctctcacatggtcagcgtg
gatgcccttaaccttactcctgatcccctttccttcgcagatttctcagactcggaccgg
ttggagcggttctttgactcagaagacgaagagtttgagatcctctccctgtga
DBGET
integrated database retrieval system
