Seriola lalandi dorsalis (Yellowtail amberjack): 111670059
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Entry
111670059 CDS
T06058
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
111670059
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
slal04040
]
111670059
Ion channels [BR:
slal04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
111670059
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
111670059
NCBI-ProteinID:
XP_023282383
Ensembl:
ENSSLDG00000025548
LinkDB
All DBs
Position
Unknown
AA seq
1267 aa
AA seq
DB search
MEDVVIPFSSEVPCDNNGQRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCHCNIKP
KEAQKVINPANNQTADKALKGPDEKEEAPASEVGWMTSVKDWAGVMISAQTLTGRVLVVL
VFALSIGALGIYFIDSSDPIESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFW
LEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNL
CSIFISTWLTAAGFIHLVENSGDPWENFQNSQSLSYWECVYLLMVTMSTVGYGDVYAKTT
LGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSAVNGRKHIVVCGHITLESVSN
FLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIES
ADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWK
EGDDAICLAELKAGFIAQSCLAQGLSTMLANLFSMRSFIEIEEDTWQKYYLEGVANEMYT
EYLSSAFVGLSFPTVCELCYVKLKLLLIAIEYKSEQRESSILINPGNHVKMQEGTLGFFI
ASDAKEVKRAFFYCKACHDDITDPKRIKKCGCKRLIYSKMSVYKRMKLACCFDCGRSEQD
CSCMSGSVHSNMDTLQRAYPLSSVSVHDCATTLRASKYKYNGYVRSPADGATTPGNSGSQ
KEAGVRFKADCNLVEDEHPSTLSPKKKQRNGGMRNSPNCSPKMMSRHDPLLIPGNEQIEN
MDMNVKRYDSTGMFHWCPSKDIEKVILTRSEASMTVLSGHVVVCIFGDVTSALVGLRNLV
MPLRASNFHYHELKPIVFVGSLDYLRREWETLHNFPKVSILPGTPLSRADLRAVNINLCD
MCVILSANQNNIEDASLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPDS
SPVHGFVRQASVTTGSNIPIITELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAVS
VLDSLMSATYFNDNILTLIRTLVTGGATPELEALLAEENALRGGYSTPQTLANRDRCRVA
QLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLSTPSQCTKRYVITNPP
YEFELVPTDLIFCLMQFDHNAGQSRTSLSHSSHSSHSSSKKSSSVHSIPPSNRQSRSSKT
REARDKQNATRMNRMGQEKKWFTDEPENAYPRNIQIKPMSTHMANQVNQYKSTSSLIPPI
REVEDEC
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgttgtcatcccgttctcgtctgaggtgccctgcgacaataatggacagcgc
atgtggtgggcattcctcgcctcctccatggtgacgttttttgggggtctcttcatcatc
ctgctatggaggaccctcaaatatctgtggactgtttgctgccattgcaacatcaaaccc
aaggaggctcagaaggtgatcaaccccgccaacaatcagacagcagacaaggcactaaag
ggtcctgatgagaaggaggaggcaccggccagcgaggtgggatggatgacttcagtcaaa
gactgggctggtgtcatgatctccgctcagacactcaccggcagagttctggtggtgtta
gtctttgcgctcagcatcggggccctcggaatatactttatagactcctcagatcctata
gaatcctgccagaacttctacaaagatttcacgttacagatcgatatggccttcaacgtc
tttttccttctttactttggcctgcggtttatagcagccaatgataagctgtggttctgg
ctggaggtcaactccgtggtcgacttcttcactgttcctcccgtgtttgtctctgtctac
ttaaacagaagctggctcggtttaagattcctgagagctctaagattgatacagttctcg
gaaatcttacagtttttgaatatcttgaaaacaagcaattccatcaagctggtgaacctg
tgttccatcttcataagcacatggctcacagctgctggattcatacatttggtggaaaac
tcaggggatccttgggaaaacttccaaaattcccagtcactttcctactgggaatgtgtc
tacttgctgatggtgactatgtctacagtgggctacggggatgtctatgcaaaaaccacc
ttgggacgcctgtttatggtcttcttcatccttggtggtttggccatgtttgccagctac
gtccctgaaatcatagagttaataggaaaccgcaagaaatatggtggttcctatagtgcg
gttaatgggagaaagcatattgtggtctgtggtcatattaccctcgaaagtgtctccaac
ttcctcaaagacttcctacacaaggacagggatgatgtcaatgtagaaattgtttttctc
cataatatttcccctaatcttgagctggaagccttgttcaaacgccattttactcaagtg
gagttctaccagggatctgttctcaaccctcacgatctggcccgagtgaagatcgagtca
gcagatgcctgtttaatccttgccaacaaatactgtgcagatccagatgctgaagatgcc
tccaacatcatgagggtcatctcaatcaagaactatcatcccaagatcagaataatcaca
cagatgctacaatatcataacaaggcccatctgctgaacattccgagctggaactggaag
gagggtgacgatgctatctgcctggcggagctgaaggcaggcttcattgcccagagctgt
ctggctcagggcctgtccacaatgctagccaacctattctccatgaggtccttcattgag
attgaggaggacacatggcagaagtattaccttgaaggagtggctaatgagatgtacaca
gagtatttgtccagtgcctttgtgggcctctccttccccactgtctgtgagctgtgctat
gtgaagctgaagctgttgcttattgccatcgaatacaagtctgagcagagagagagcagc
atcctcatcaacccgggcaaccacgtcaagatgcaggagggaacactgggattctttatc
gccagtgatgccaaagaagtgaagagagcttttttctactgcaaagcttgtcatgatgac
atcacagaccctaagcgaatcaagaagtgtggctgcaaacgactgatttattccaagatg
tccgtctacaaacgaatgaaactggcatgttgttttgattgcggccgttcagagcaagac
tgctcttgcatgtcaggcagtgtacatagtaacatggacacccttcagagggcctaccca
ctttcctctgtctctgttcatgattgcgcaaccactttacgtgcctccaaatataagtat
aatggatatgtcagatcaccagcagatggcgctacaacaccagggaacagtggaagtcaa
aaagaggctggcgttcgattcaaagctgattgcaatttagtcgaagatgagcatccatca
actctctcgcccaaaaaaaagcagcgcaacggagggatgcgaaactcacccaactgctcg
cccaagatgatgagtcgtcacgacccccttctaattcctggaaatgaacaaattgagaac
atggacatgaacgtgaagaggtatgattcgacagggatgtttcactggtgcccatcaaag
gatatcgaaaaagtcatcctgacccggagtgaagcctccatgacagtgctgagcggccat
gtagtggtctgtatatttggggatgtcacgtccgctttggtggggctgcgaaacttggtg
atgcctttaagagccagcaacttccattaccacgagttaaagcctatagtttttgtgggc
tcgctggattacctgcgcagagagtgggaaactttacacaacttccccaaggtctccatc
ttacctggtacaccattaagtcgggcagatttaagggctgtcaacatcaacctctgcgac
atgtgtgtaatactgtcagccaatcagaacaatatcgaagatgcctcactgcaggataag
gaatgcatcttggcatcactcaacatcaaatctatgcagtttgatgacagcatcggggtc
ttacaggctaattcccaaggtttcacgcctcctggaatggacaggtcatctccagacagc
agtccagtacatggctttgttcgccaggcttccgtcaccaccggatccaacatccccatc
atcacagaactagtgaatgactcaaacgttcagttcctggaccaagatgatgatgatgac
ccagacacagagctgtacctcactcagccgttcgcctgcggcaccgccttcgctgtcagt
gttctcgactccctgatgagcgcaacgtacttcaatgataacatcctcacactgattcgg
acgctggtcacagggggagccacaccagagctggaggctctgttggctgaggagaacgct
ctcagaggaggctacagcacgccacagacactggccaacagagacaggtgtcgcgtcgct
cagctagccctctacgacgggccatttgcagacttgggggatggcggctgctatggggat
ttattctgtaaagcgctgaagacgtacaacatgctgtgttttggaatctacagattaaga
gacgctcatctcagtacaccaagccagtgtacaaaacgatatgtgattacaaacccaccg
tatgagtttgagctggtgcccacagacctgatcttctgcctcatgcagttcgaccacaat
gcaggccagtcccggacaagcttgtcccactcttcccactcttcccattcctccagcaaa
aagagttcctccgtccactccatcccgccctccaaccggcagagccgcagcagtaagacc
cgggaggcccgcgacaaacagaatgcaacaaggatgaatagaatgggccaagaaaagaaa
tggtttacagatgaaccagaaaatgcctacccacggaacattcagatcaagcccatgagc
actcacatggccaaccaagtcaaccaatacaaatccactagtagtctgattccaccaatc
agagaagttgaagatgaatgctga
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