Seriola lalandi dorsalis (Yellowtail amberjack): 111670624
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Entry
111670624 CDS
T06058
Symbol
ybx1
Name
(RefSeq) nuclease-sensitive element-binding protein 1 isoform X1
KO
K09276
Y-box-binding protein 1
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slal03000
]
111670624 (ybx1)
03019 Messenger RNA biogenesis [BR:
slal03019
]
111670624 (ybx1)
03041 Spliceosome [BR:
slal03041
]
111670624 (ybx1)
Transcription factors [BR:
slal03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
111670624 (ybx1)
Messenger RNA biogenesis [BR:
slal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
111670624 (ybx1)
mRNA cycle factors
Common to processing body (P body) and stress granule
111670624 (ybx1)
Spliceosome [BR:
slal03041
]
Common components
Common spliceosomal components
General mRNP proteins
111670624 (ybx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
111670624
NCBI-ProteinID:
XP_023283182
Ensembl:
ENSSLDG00000024354
LinkDB
All DBs
Position
Unknown
AA seq
327 aa
AA seq
DB search
MSSEAETQQQQPPQPAADAESPSSPAAAASAGDKKVIATKVLGTVKWFNVRNGYGFINRN
DTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVAVQGSKY
AADRNRYRRYPRRRGPPRGGDYPENYQSDGEGEPGSGGRDKSSREGGESAPEGDQQQQQR
RPTYPGRRRYPPYFVRRRYGRRPPYTNAPRGEMTEGGEGDESQGGPDQGNKPVRQNYYRG
FRPRFRPRGPPRPRPVRDGEEDKENQGGEGGQNQQPRQRRYRRNFNYRRRRQQTGGKPGQ
ENKEAKTGGDPSAEKTSAPEAQQGGAE
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgagacacaacaacaacaaccgccgcagcctgctgccgatgcggag
agcccatccagcccggcagccgcagcttccgcgggggataagaaggtcatcgcaacaaaa
gtcttgggtacagtcaaatggttcaacgtcaggaatggatatggtttcatcaataggaat
gatacaaaagaggacgtttttgtacaccagacagccatcaaaaagaacaacccgaggaaa
taccttcgcagtgttggagatggagaaactgtggagtttgatgtagtcgagggagagaag
ggagcagaggcggcaaatgtcactggcccaggaggcgttgcagtccaaggaagtaagtat
gctgctgacaggaaccgttataggcgctacccccgaaggaggggccctcctcgtggcgga
gactatccagagaattaccagagtgacggagagggtgagcctggcagcggaggtcgagac
aaaagcagcagagaagggggagagagtgcccctgaaggagaccagcagcaacagcagcgc
agacccacttaccctggcagacggcgctacccgccatactttgtacgtagacgctacggg
cgccggcccccgtacaccaacgcaccacgcggagagatgactgagggaggtgagggtgac
gagagccagggaggtccagaccagggcaacaaaccagtgaggcagaactactacagaggc
ttccgaccaaggttcagaccaaggggtccaccccgtcccagaccggtgcgggacggtgaa
gaggacaaggagaatcagggtggcgaaggtggtcaaaaccaacagccccgccagaggcgc
taccgccgtaacttcaactaccgccgcagacgccaacagactggtggcaagcccggccag
gaaaacaaggaggccaagacaggaggtgacccatctgcagagaaaacgtccgctcccgag
gcccagcagggtggggctgagtag
DBGET
integrated database retrieval system
