Seriola lalandi dorsalis (Yellowtail amberjack): 111670797
Help
Entry
111670797 CDS
T06058
Name
(RefSeq) sodium channel protein type 8 subunit alpha-like isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
111670797
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
slal04040
]
111670797
Ion channels [BR:
slal04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
111670797
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
FraC
HpsJ
GPHH
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
111670797
NCBI-ProteinID:
XP_023283457
Ensembl:
ENSSLDG00000005220
LinkDB
All DBs
Position
Unknown
AA seq
1967 aa
AA seq
DB search
MAAPLLAPPGPDSFKKFTLESLVGLEQRINEEKNRKPPKQDSSYRDDDDENKPKPNSDLE
AGKSLPYIYGDIPPGMVAVPLEDLDPYYLNSQKTFIVLNKGKTIFRFSATPALYFISPLN
LVRRIAIKILIHSLFSMIIMCTILTNCIFMTFSDPPEWSKQVEYTFTGIYTFESLVKICA
RGFCIDGFTFLRDPWNWLDFMVISMAYITEFVDLGNVSALRTFRVLRALKTISVIPGLKT
IVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCVFWPINTTESLLANGSKG
FDWDEYIMNDTNFYFLPGQADALLCGNSSDSGRCPEGYTCMKAGRNPNYGYTSFDSFGWA
FLALFRLMTQDFWENLYMLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQ
ATMEEAQQKEEEFKAMLEQLKKQQEDAQTAAMATSAGTVSEDAVEDDGGGRLSCSSSEMS
KLSSKSAKERRNRKKKWRQKEQEKEKGDSEKFVKSESDDGSKRSRFRFPDNRLGRKSSIM
NQSLLSIPGSPFLSRHNSKSSIFSFKGRGKDVGSENEFADDEHSTVEECEERRGSLFSPY
RRSSYSGFHGKRNSTVDCNGVVSLIGPGPGGRLLPEVKIDKAATDDSPTTEVEVKKKLSG
SLMVSVDQLNTSFGRKERANSVMSVITNTLVEELEESQRKCPPCWYKFSNTFLIWECSPM
WIKIKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTPDFEDMLSVGNLVFTGIFAG
EMLFKLVAMDPYYYFQEAWNCFDGFIVTLSLVELALADVEGLSVLRSFRLLRVFKLAKSW
PTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKIAADCELPRWH
MNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNLVVLNLFLALLLS
SFSADNLAATDDDGEPNNLQISVMRIKIGIAWIKAKMRILMASLLKKPPMEDEQKPLDDM
YDKKLNCIANHTGVDINRDLDYAKNGNGTTSGIGSSVGKYMIDEDHMSFIHNPNLTVCVP
IAVGESDFENLNTEDFSSESDNENSKELDDTSSSEGSTIDIKPDVEEVVVVETVEEYLEP
EACWTDACVAKYKCCDLDITMGWGKIWWFLRKTCYLIVEHNWFETLIIFMILLSSGALAF
EDVYIEQRKTVRIILEYADRVFTYIFILEMLLKWVAYGFVKYFTNAWCWLDFFIVDVSIV
SLVANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIF
WLIFSIMGVNLFAGKYYYCFNQTSEEYFPVDVVNNKTQCEALIQQNFTEVRWKNVKINFD
NVGAGYLALLQVATFKGWMDIMYAAVDSREVEDQPDYEVNIYMYIYFVVFIIFGSFFTLN
LFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIQGMVFD
FVTQQVFDISIMILICLNMVTMMVETDDQSNETEHVLYWVNFIFIVVFTTEFLLKLFALR
HYYFTNGWNIFDVVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKGAKGI
RTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFGYVKHGAGIDDLYNFETFGNSMII
LFMITTSAGWDGLLLPILNYPPDCDPNLENPGTSVKGDCGNPSVGIFFFVMYIIISFLIV
VNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPTASQFITFAKLSDFADALEH
PLRVPKPNTIELIAMDMPMVSGDRIHCLDILFAFTKRVLGDSGELDMLRQQMEERFVAAN
PSKVSYEPITTTLRRKQEEVSARIIQNAYRAHLIRRGIIFKRHTFTNNKLENGGTNQEKK
ESTPSTASLPSYDSVTKPDKEKQDENKEDWARKEKDKNQKDEWESKC
NT seq
5904 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaccccttcttgcaccgccaggacctgatagcttcaagaagtttactttggaa
tctttggtgggccttgagcagcgcatcaatgaggagaagaacaggaaaccacccaagcag
gacagcagctaccgtgacgatgatgacgagaacaagcccaagcccaacagcgatctggag
gctgggaagagcctgccctacatctatggggacatccctccaggaatggtggcggtacca
ctggaggacctggacccatactacctgaattctcaaaaaacatttatagtgctaaataaa
gggaagacaatcttccgttttagtgccacacctgccttgtacttcataagtcctttaaat
ctggttaggcgaatagctattaaaattttgatacattctcttttcagcatgatcattatg
tgtactattttgaccaactgtatattcatgacctttagtgatcctccggagtggtcaaaa
caagtagagtacacattcacgggaatttatacgtttgagtctcttgtaaaaatctgcgca
cgaggattctgtatagacgggtttacattcctaagagatccatggaactggctggatttc
atggtcatttcgatggcatatataacagagtttgtggacctgggcaatgtatctgcgctg
agaacattcagagttctccgagcattgaaaactatctctgtcattccaggactgaagacc
attgtgggcgccctgatccagtctgtgaagaagctttcggatgtgatgatcctgaccgtc
ttctgcctcagcgtctttgccctcatcggtctccagctcttcatgggcaacctgcgccac
aagtgtgtgttctggccgatcaacaccaccgagagcttactggccaacggcagcaagggc
tttgactgggatgagtacatcatgaacgacaccaatttctacttcctgcctggccaggcg
gacgctcttctctgtgggaacagctctgactctggccgctgcccggagggctacacatgc
atgaaagctgggaggaatccaaactatggctacaccagctttgacagcttcggctgggcc
ttcctggctctcttcagactcatgacacaggacttctgggaaaacctttacatgctgact
ctgagggcggcagggaagacctacatgatcttctttgttttggtgatctttgtgggctct
ttctacttggtgaatctgatcctggctgtggtggccatggcttatgaggagcagaatcag
gcgaccatggaggaggcccagcagaaggaggaggaattcaaggccatgctggagcagctt
aagaagcagcaggaagacgcccagactgctgccatggcaacctctgcgggcacagtgtca
gaggacgcggtagaggacgatggaggagggcgtctgtcgtgcagttcctctgagatgtcg
aagctcagctccaagagtgccaaagagcggcgcaaccgtaagaagaagtggcggcagaaa
gagcaggagaaagagaaaggcgacagcgagaagtttgtcaagtcagagtctgatgacggc
agcaagaggagccgcttccgtttccccgataaccggctgggtcgaaagtcttccattatg
aaccagtccctcctcagtatacctggttcgcctttcctgtcccgccataacagtaagagc
agcatcttcagtttcaagggccgcggtaaggatgtgggttcggaaaatgagtttgccgac
gatgagcacagcacggttgaggagtgcgaggagcgccggggctccctgttcagcccgtac
cggcggagcagctacagcggcttccacgggaaaaggaacagcacggtggattgcaatggc
gtggtgtcgctcatcggccctgggcccggtggacgccttctgcctgaggtgaaaatagat
aaggcagctactgacgacagtccgactactgaggttgaggtgaagaagaagctgtcgggc
tccctgatggtgtctgtggaccagctcaatacctcctttgggcggaaagagcgggccaac
agtgtcatgagcgtcattaccaacacactagtggaggaactggaggagtctcagcgcaag
tgtccgccatgctggtataagttttctaacacattcctgatctgggagtgctcccccatg
tggattaagatcaaggagattgtgaacctgatagtcatggaccccttcgtggacttagcc
atcaccatctgcatcgtcctcaacaccctcttcatggccatggagcactaccccatgacc
ccagactttgaggacatgctctctgtaggcaatctggtgttcacggggatctttgcaggg
gagatgcttttcaagctggtggctatggatccatactactacttccaggaagcctggaac
tgttttgatggtttcattgtgacgctgagtttagtggagctggctctggctgacgttgaa
ggcctgtctgtgctgcggtcattccgattgctgagagtgtttaagctggccaagtcatgg
cccaccctcaacatgctgatcaagatcattggtaactcagtgggagccctggggaacttg
actctggtgctggccatcatcgtcttcatctttgctgtggtgggcatgcagctgtttgga
aagagctacaaagactgtgtgtgtaagatcgctgctgactgtgagctgccccgctggcac
atgaatgacttcttccactccttcctgatcgtcttccgggtgctgtgcggcgagtggatt
gagaccatgtgggactgcatggaagtggcgggtcaggccatgtgtctcattgtcttcatg
atggtcatggtcatcggcaacctggtggtgctgaacttgttccttgccttgctgctgagc
tcattcagcgctgacaacttggctgcaacagatgacgatggtgagcccaacaaccttcag
atttcagtcatgcgcatcaagatagggatcgcatggataaaagcgaagatgcggatactg
atggccagtctgctgaagaaaccaccgatggaggacgagcagaagcctttggacgacatg
tacgacaagaagctgaactgcattgctaatcacaccggggttgacatcaaccgtgacctg
gactacgccaagaatggtaacggcaccaccagcggtataggcagcagcgtggggaagtac
atgatcgatgaggaccacatgtcttttatccacaacccgaatctgaccgtctgcgtgccc
atagctgtgggagagtctgactttgagaacctcaacacagaggacttcagcagcgagtcg
gataatgagaacagcaaagagctggatgacactagttcgtcagaaggcagcaccatcgac
atcaagccagatgtggaggaggtggtggtggtggagacagtagaggaatacctggaacca
gaggcatgctggacagatgcttgtgtggccaagtataagtgctgcgaccttgacatcact
atgggctgggggaagatctggtggttcctgagaaaaacctgctacctgattgtggagcac
aactggtttgagaccctcatcatcttcatgatcctcctcagtagtggtgccctggccttc
gaggacgtgtacattgagcagaggaagaccgttcggatcattttggagtatgctgacagg
gttttcacctacatcttcatcctggagatgttgctgaaatgggtcgcctatggtttcgtc
aagtacttcaccaatgcctggtgttggctggacttcttcattgtggatgtgtctatagtc
agccttgtagctaatgcgctgggctactccgatctaggccccattaaatcactcaggaca
ctaagggccttgagacccctcagagccttgtcacgttttgaagggatgagggtggtagtc
aacgccttggtgggtgccatcccttccattatgaatgtgttgctggtttgcctcatcttt
tggctgattttcagtataatgggggtcaacctgtttgcgggcaagtactactactgtttc
aatcagacatcagaggaatactttcctgttgacgtggtcaacaacaagacccagtgtgag
gccctcattcagcaaaactttaccgaggtcaggtggaagaacgtcaagatcaactttgac
aatgtgggcgccggctacctcgccctgctgcaagtggccacgttcaaaggctggatggac
attatgtatgcggctgtggattccagagaggtggaagaccagcccgactatgaagtcaac
atctacatgtacatctactttgtcgttttcatcatattcggctccttcttcaccctcaat
ctcttcattggtgtgatcattgacaacttcaaccagcaaaagaaaaagtttggaggtcaa
gatatcttcatgacagaggaacaaaagaagtactacaatgccatgaaaaaacttgggtcc
aaaaagccacaaaaacctattcctcgaccgcagaacaagatccagggaatggtgtttgac
tttgtgacacagcaagttttcgacatctccattatgattctcatctgcctcaacatggtc
accatgatggtggaaacagatgatcagtcaaatgaaacggagcatgtcctctactgggtc
aacttcatattcatcgtagtcttcaccacggagttcctgctgaagctctttgcccttcgc
cactattacttcaccaatggttggaatatctttgacgtggtggtggtcatcctgtctatt
gttggtatgttcttggctgacctcattgagaagtactttgtgtcgccaactctcttcagg
gtgatcaggctggctcgtattggtcgtatcctccgtctgatcaaaggagctaagggcatc
cggacattactctttgctctgatgatgtcactgccagccctattcaacatcggcctactg
ctcttcctggtcatgttcatcttctccatctttggcatgtctaactttggttatgtaaaa
cacggagcaggcattgacgacctgtacaactttgagacctttggcaacagtatgatcatt
ctgtttatgatcaccacgtcggccggatgggatggcttgctgctaccgatcctcaactac
ccaccagactgcgaccccaacttggagaaccctggtacatctgtgaagggcgactgtggt
aatccctcagtgggaatcttcttttttgtcatgtatatcataatttctttcctgattgtg
gtcaacatgtacattgccatcatcttggagaacttcagtgtggccacagaggaaagtgct
gatccactcagtgaggacgactttgagaccttctacgagatctgggagaagtttgacccc
actgcctctcagttcattacttttgccaagctgtctgactttgctgatgcattggagcac
ccacttcgtgtgccaaagcccaacactatagaactaattgccatggacatgcccatggtg
agcggcgatcgcattcactgcctggacatcctgtttgccttcacaaagcgtgtgctgggt
gacagtggtgagttggacatgctgaggcagcagatggaggagcgtttcgtggcagccaac
ccctccaaagtgtcatacgagcccatcaccaccaccctccgccgcaaacaggaggaggtc
tctgccagaattatccagaatgcctaccgcgcccacctcatcaggcgcggcatcatcttc
aaacgccacacttttaccaacaataagcttgagaatggcggcaccaaccaagagaagaaa
gagagcacaccatccacagcctcgctcccctcttacgacagtgtgaccaaacctgacaag
gagaagcaggacgagaacaaggaggattgggccaggaaagagaaggacaaaaaccaaaaa
gatgagtgggaatccaagtgttag
DBGET
integrated database retrieval system
