KEGG   Seriola lalandi dorsalis (Yellowtail amberjack): 111671077
Entry
111671077         CDS       T06058                                 
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2-like isoform X1
  KO
K10415  dynein cytoplasmic 1 intermediate chain
Organism
slal  Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04145  Phagosome
slal04814  Motor proteins
slal05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:slal00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    111671077
  09142 Cell motility
   04814 Motor proteins
    111671077
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    111671077
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:slal03036]
    111671077
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:slal04812]
    111671077
Chromosome and associated proteins [BR:slal03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   SAC (spindle assembly checkpoint) factors
    Motor proteins
     Dynein complex
      111671077
Cytoskeleton proteins [BR:slal04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Dyneins
     111671077
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 WD40 Dynein_IC2 WD40_WDHD1_1st Beta-prop_EML WDR55 Beta-prop_RIG_2nd Beta-prop_EML_2 Beta-prop_IFT140_1st Beta-prop_TEP1_2nd Beta-prop_HPS5 Beta-prop_EIPR1 EIF3I Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_SPT8 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_DCAF4 Beta-prop_IP5PC_F Nbas_N Pep3_Vps18 Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 111671077
NCBI-ProteinID: XP_023283841
Ensembl: ENSSLDG00000020217
LinkDB
Position
Unknown
AA seq 651 aa
MSDKSELKAELERKKQRIAQIREEKKRKEEEKKKKDGDSKRGVEAGGGSSVGHEDSDLER
KRREAEALLQSVGIAPDIPHAQPLRVVTEDTCLFHYLVPAPMSPSNKSVGSDAGSQDSGD
GNAGPRTLHWDPDPSTLQLHSDSELMGRGAVRLGMSKVTQVEFVPKEMVSYSKETQTPTE
AQTHTEQKADEEEDEEIAAPPPVEDTQEEKDEQGEQQEEDTPKELTEEEKLQVLHSEEFL
SFFERGSRIVERALAEQVDVCFDYSGRDLEDKEGDLQAGAKLFLNRQFSDERWTKNRVVT
CLDWSPQYPELLVASYNNNEDAPHEPDGVALVWNLKYKKGTPEYIFHCQSEVMSVGFAKF
HPNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQNANNLISIST
DGKMCSWSLDMLSQPQDSLELVFKQSKAVAVTSMAFPLADVNNFVVGSEDGSVYTACRHG
SKAGITEVFEGHHGPVTGLSCHSAGGPVDFSHLFISSSFDWTVKLWSTKSTRPLYSFEDS
CDYVYDAMWSPTHPALFACVDLAGRLDLWNLNNDTEVPTASVCVEGSPALNRVRWAHTGK
EIATGDSEGQVQVYDVGEQICVPKADEWTRFVRTLAEINENRDEAEELANV
NT seq 1956 nt   +upstreamnt  +downstreamnt
atgtctgacaagagtgagctgaaggctgagctggagaggaagaaacaacggatcgctcag
attcgagaggagaagaagagaaaagaagaggagaagaaaaagaaggatggagattcaaag
cgtggagtggaggcgggcggtgggtcttctgtcggccatgaagactctgacctggagagg
aagaggagggaggcggaggcactgctgcagagtgttggcatcgcccctgacataccccat
gctcagcccctgagggtagtaacagaagatacatgtctgtttcactacctagtccctgcc
cccatgtctccctccaacaaatcagtgggcagcgatgcaggaagccaagattcaggggat
ggaaacgcaggaccaaggacattgcattgggatcctgacccctctactctgcaactccac
tccgactctgagctgatgggacgtggagctgtgaggctgggcatgtctaaagtgacccag
gtggaatttgtcccaaaggaaatggtgtcttactccaaagaaacacagacacccactgag
gcgcagacacacactgaacaaaaagcagatgaggaagaggatgaggagatagctgctccc
ccaccagtggaggacacccaggaagagaaagatgaacagggtgaacagcaggaggaggac
actcctaaggagctgacagaagaagagaagctgcaggtcttgcactctgaggagttcttg
tcgtttttcgagcggggcagcagaattgttgagagagctctggctgagcaggtggacgtc
tgcttcgactacagcggcagggatctagaggataaggagggtgacttgcaggcaggtgca
aagttgtttctgaacagacagttttcagatgagcgctggaccaaaaacagggtggtcact
tgtctggactggtcccctcagtacccagagctgctagtggcctcgtataacaacaatgag
gatgctccccacgagcctgatggagtggcactggtctggaacttgaagtacaagaagggc
acgcccgagtacatcttccactgccagtcagaggtgatgtctgtcgggtttgcaaagttt
caccccaacctggtggtgggtgggacgtactctggacagattgtcttatgggacaaccgg
agcaacaagcgcacccctgttcagagaacccccctgtctgcagctgcacatacacaccca
gtctattgtgtgaatgtggtaggaacccaaaacgctaacaacctgatcagcatttccact
gacggaaaaatgtgttcctggagtctcgacatgctctcgcagccgcaggacagtctggag
ctggtgttcaaacagagtaaggcagtggctgtcacctccatggccttccctctggccgat
gttaacaactttgtggtggggagcgaggacggctctgtctacaccgcctgtcgccacggg
agcaaggcgggtattactgaggtgtttgaaggccaccatggtccagtgaccgggctgagc
tgtcacagcgctggtgggcctgttgacttctctcatctcttcatctcctcctcttttgac
tggaccgtgaaactctggagcactaagagtacccgtccactgtactcatttgaggacagt
tgtgactacgtctatgatgcaatgtggtctccaacacaccctgctctgtttgcttgcgtg
gatctagctggacgtctggacctgtggaacctcaacaatgatacagaagttcccaccgcc
agtgtgtgtgttgaagggtctccagcactgaaccgtgtgagatgggctcacactggaaaa
gagattgccactggggactcggagggacaggttcaggtgtatgatgtaggggagcaaatc
tgcgtgcccaaggctgatgagtggacgcgcttcgtcaggacgctggctgagatcaacgag
aaccgagacgaagctgaggaactggccaatgtctga

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