Seriola lalandi dorsalis (Yellowtail amberjack): 111671106
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Entry
111671106 CDS
T06058
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slal04131
]
111671106
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slal04147
]
111671106
Membrane trafficking [BR:
slal04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
111671106
Exosome [BR:
slal04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
111671106
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_LRRK2
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
111671106
NCBI-ProteinID:
XP_023283885
Ensembl:
ENSSLDG00000020433
UniProt:
A0A3B4YE84
LinkDB
All DBs
Position
Unknown
AA seq
940 aa
AA seq
DB search
MPLRLDIKRRLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRQVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVCGLRGSNNVALGYDEGSIIIKVG
REEPAMSMDTNGKIIWAKHSEIQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILRYLADKVAASQENNEGVTEDGIEDAFEVQGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNATMVGKLAEGAE
RDGKNNVAFMTYFLQGKLDQCLELLIRTNRLPEAAFLARTYLPSQVSRVVKLWRENLAKV
NQKAAESLADPTEYENLFPGLKEAFAAEYYLRETCLGNSRPAKDYPLVTPNEDRNILEEA
QGYESNGTFIPPVSKTQDAEESTSVAAAPVAAAAEPPVMPSQPEPAAPTAVDEKEEEEEE
IPEFSQKDKSLDELEVDLDNMELDDIDTTDVNLDDDFLDD
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgaggctggacattaagcggaggctgacagccaggtcagacagagtaaagagt
gtggaccttcacccaacggagccatggatgctggccagcctgtacaacggcagcgtctgt
gtgtggaaccatgaaacacagacgcttgtcaagacttttgaagtgtgcgacctccctgtc
agagcttctaagtttgtggcaaggaagaactgggtcatcacaggagcggatgacatgcag
atccgtgtgttcaactacaacaccttggagcgggtccacatgtttgaggcccactctgac
tacatccgttgcatcgctgtgcacccaacccagccctatatcctcaccagcagtgatgat
atgttgatcaagctatgggactgggagaagaaatggtcgtgcagccaggtgtttgagggc
cacactcactacgtcatgcagattgtcatcaaccccaaggataacaatcagtttgccagt
gcctccctggacaggacgattaaggtttggcagctaggctcttcgtctcccaatttcact
ttggagggccacgagaaaggagtcaattgtattgactactacagtggaggagacaagccc
tatctcatctcaggggctgatgaccgccaagtcaagatctgggactaccagaacaagacc
tgtgttcagactctggagggccatgcccagaatgtctcctgtgtcagcttccacccagag
ctgcccatcatcatcactggatcagaggatggtacggtgcgtatctggcactcaagcact
taccgtctggagagtacactgaactacggcatggagagagtgtggtgtgtgtgtggcctc
aggggctccaacaatgtggcactgggctacgacgaaggcagcatcattataaaggtgggt
cgtgaggagccagccatgtctatggacactaatggcaaaatcatctgggccaaacacagt
gaaatacagcaggccaacttgaaggccatgggtgatgctgaaatcaaggatggagaacgg
ctcccactggctgtcaaagacatgggcagctgtgagatttacccccaaaccatccagcac
aaccctaatggaaggttcgtcgtagtgtgcggagatggagagtatatcatctacactgcc
atggctttgaggaacaagagctttggttcagcgcaggagtttgtctgggcacatgattcc
tctgaatatgccatcagagaaagcaacagtgttgtcaaaatcttcaaaaatttcaaagaa
aagaaatcttttaagcctgactttggagctgaagggatttatggaggcttcttgcttggg
gtgagatcagtaaatggcctggcattttatgactgggagaacacagagctgatccgccgc
attgagatccagcccaaacatatcttctggtcagactctggtgagctggtctgcattgct
acagaggagtccttcttcattctgcgttacctggcagataaagtagcagcctcccaagag
aacaatgaaggagtgacagaggatggtattgaagatgccttcgaggtccagggagagatc
caggagattgtgaagactggactctgggtaggagactgcttcatctacaccagctctgtg
aacagactaaactactatgtgggaggagagatcgtcactattgctcatctggacaggacc
atgtacctgttgggttacatacccaaagacgaccgtctctacctgggagacaaggagctc
aacattgtcagttactcgctgctggtttccgtcctggagtaccagactgctgtaatgagg
agagattttggaatggctgacaaggtgctgcccacaattcctaaagagcaacgcaccagg
gtggcccatttcctggagaaacagggtttcaagcagcaggcactggcagtgtccactgac
ccagagcacaggtttgagctggccttgcagctgggagagttgaagatcgcctatcagctg
gctgtggaggcagagtcggaacagaagtggaagcagctagctgagctggctatcagcaag
tgccagtttggcctggcccaggagtgcctgcaccacgcccaggattatggtggcctgctc
cttcttgccacagcctccggtaacgccactatggtgggcaagctggctgagggggcagag
agggacggaaagaacaatgtggccttcatgacgtacttcctgcaggggaaactggatcag
tgtttggagcttctgatcaggaccaaccgactacctgaagctgccttcctggctcgtacc
taccttcccagccaggtgtctcgtgtggtcaaattgtggagggagaacctggctaaggtc
aaccagaaggcggctgaatcgttagcagaccctacagagtatgagaatctgttccctggg
ctgaaagaagcctttgcagctgaatattatctgagagagacctgcttgggcaactccagg
cctgctaaagattatcctcttgtcactcccaatgaagacaggaatattcttgaggaggct
caaggatacgagtccaatggaaccttcattccccctgtttcaaagacacaggatgctgag
gagtccacctcagtggctgcagctcctgttgcagcagcagcagaaccacctgtgatgcct
tcacaacctgaacctgctgctcctacagcagtggacgaaaaggaggaggaggaggaggaa
atccctgagttttcacaaaaagataagtctctggacgagctggaagtggacctggacaac
atggagctggatgacatcgacaccacagacgttaaccttgacgatgacttcttagatgat
tga
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integrated database retrieval system
