Seriola lalandi dorsalis (Yellowtail amberjack): 111671188
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Entry
111671188 CDS
T06058
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111671188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slal04121
]
111671188
Enzymes [BR:
slal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
111671188
Ubiquitin system [BR:
slal04121
]
Ubiquitin ligases (E3)
HECT type E3
111671188
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
TMEM240
EKLF_TAD1
Motif
Other DBs
NCBI-GeneID:
111671188
NCBI-ProteinID:
XP_023283992
Ensembl:
ENSSLDG00000022304
LinkDB
All DBs
Position
Unknown
AA seq
1048 aa
AA seq
DB search
MLCWGNAKDGQLGIGMDRNPMFEPRNCLVFSGRGLKEVACGGQHSMFLLQDGSVYTCGAN
CCGQLGHDKPGTSPELVGALDTQKITVVSSGRAHSMAVNEQGQVFAWGAGEGGQLGLGTA
EVAVRIPRLVKRLCDHRISQVMCGNQHCIALSRDGQLFTWGQNTSGQLGLGKGEPSKLFP
HPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVPCHIKFLRS
QKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHGSTNNELLPRRVLELMGTEVSQITC
GRHHTLAFVPSSGLVYAFGCNSHGQLGTGILGDARSPFPVKTSLLTGHFHRPESTQYIVT
KIICGGDHSFLLYSNEQSSAPQEDFRVINISKSLSPITYERLNSWRLKLMYSTDSSVTND
IIVQLSSTACWNASFLDQSDDTHFKTNPKIPGIDLNSVRLLFEILSKPAFSGLLEQATKS
FESLLIPQLPHSPPDVEAMRIYLILSEYPALQDSRNYIRLTIPLAMAILRLDANPSKVLD
NWWCFVDDSVFTRMVDMYKSIVVFMLTGGKTLLVPVFYENYFLATLRLLEKLHKVNLKAH
HVEYNRFYIPDITSLVDIQEDYLKWFLSKAEIKMGSSPSQSDFPSVNLCAYPFILNAQAK
TTMLQTDAELQMQMAVSGANLHNVFMLLTLEPHLARNPYLVLHVRRNHLVSDTLRELTMY
SDVDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELMDPVYGMFTHYKESNLLWFSDKCF
VEQNWFHLIGIICGLAIYNSTVVDLHFPLALYKKLLDVSPMLEDFKELSPTEARSLQQLL
DYEGGDVEETFLLNFAITRENYGMTEVKELIPGGESISVDKNNRKEFVEAYLRYVFSDSV
SEQYSAFSAGFLKVCGGEILSLFQPSELMAMVVGNNNYNWEEMEKNAVYKGEYTATHPTV
RLFWEVFHEFPLEKKKQFLLFLTGSDRIPIHGMESLRIIIQSTTAEEHYLPVAHTCYNLL
DMPRYQTKEILRRRLTQAVEQYEGFSLV
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgttgggggaatgcaaaggatggacagttgggtattggtatggataggaacccc
atgtttgagccaaggaactgtcttgtgttcagtggcaggggactgaaagaagtcgcctgt
ggagggcaacactcaatgttcttgctgcaggatggtagcgtgtacacatgtggcgctaac
tgttgtggacagctgggccatgacaaaccagggacttccccagagctagtaggagctctg
gacactcagaagataacggtggtgtcaagtggtcgggcccattctatggcagtgaatgag
cagggtcaggtttttgcctggggagctggtgaagggggtcagctcggcctggggactgca
gaggtggctgttcgaatcccaaggttggtcaaaagattgtgtgaccatcgcatctcccaa
gtaatgtgtggaaatcagcactgcatcgcactttctagagatggccagttgttcacgtgg
ggccagaacaccagcggtcagctgggcctgggaaaaggagagcccagcaagctgttccct
catcccctgaagtctctggcaggaattcctttggcacagataaccgctgggggagaccac
agctttgctctctccttgtccggagctgtatttggctggggcaaaaacagagcgggacaa
ctgggtctcaatgataaacaagatcgtgctgtcccatgccacatcaaatttttgagatct
caaaaagttgtttacatcagctgtggagatgaacatacagcagcactcacaaaggatggt
ggtttgtttacgtttggagatggctcatggggtcagctgggtcacggctccaccaataat
gaacttttacccagacgagtgctggagctcatgggcactgaggtgtcccagatcacctgt
ggcaggcaccacacactggcgtttgtgccttcctctggtttggtttatgcgtttggttgc
aacagccatggccagctcggcacaggaatactcggggatgctagaagcccatttcctgtt
aagaccagtttgctaactggacatttccatagaccagaatcaacacagtacattgtgacc
aaaatcatctgtggaggagaccatagtttcttattgtactctaatgaacagagctcagcc
ccccaagaagacttcagagtgattaatatcagtaaaagcctctccccaatcacttatgaa
aggttaaattcatggaggttaaaactgatgtacagcacagattctagtgtcacaaacgac
attatagttcaactctcttctacggcttgttggaatgccagcttcttggaccaaagtgat
gatacccacttcaaaaccaacccaaagatcccaggcatcgatctcaattctgtcagactg
ctatttgagatactcagcaaaccggctttctctggacttctggagcaggccaccaagagt
tttgagagtctgttgatccctcaactaccgcactctcctcccgatgtcgaggccatgagg
atctatctcatcctttccgagtatccggccctgcaggattcccgaaactacatccgcctc
actatccccctggctatggccatcctccggctagacgccaaccccagcaaagtattggac
aactggtggtgttttgtggacgacagtgtgttcaccagaatggttgacatgtacaagagc
atcgtcgtgtttatgctaacgggaggaaagacgctgctcgtaccggtgttctacgagaac
tattttcttgccacgctaaggctgctggaaaaacttcataaggtaaacttaaaggcccac
catgtggagtacaaccgcttttatatccctgacatcaccagcctggtggacatccaggaa
gactacctcaaatggtttttgagtaaagctgaaattaaaatgggatcatctccttcacag
agtgactttccctcagtgaacctatgtgcctacccgttcatactgaacgcccaagccaag
acaaccatgctgcaaacagatgctgaactgcaaatgcagatggcagtaagcggtgcaaac
ctacacaatgtcttcatgctgctcacactggaaccccaccttgccaggaatccttacctg
gttctccacgtgcgcaggaaccatttagtaagtgacactttgcgtgagctcaccatgtac
tctgacgtggacctcaagaaaccactcaaggtgatctttgatggagaggaggccgtagac
gcaggtggagtaactaaagagttcttcctgctgctgttaaaggagctgatggatcctgtt
tatgggatgttcactcattacaaagaatccaacctgctgtggttctcagacaaatgcttt
gtagagcagaactggtttcatcttattgggatcatctgcggtctggccatctacaactcc
acagtggtggacctccacttccccctggctctctacaagaagctgcttgacgtatcacca
atgctggaggacttcaaggagctctcccccaccgaggccaggagtctacaacaacttcta
gactatgaaggaggtgatgtggaggagacatttcttctcaactttgccatcaccagggag
aactacgggatgacggaagtcaaggagctgattcccggaggagagagcatcagtgtggac
aaaaacaacaggaaggagtttgtggaggcctacctacggtacgtgttctcagactcagtg
agcgagcagtactctgccttctccgctggtttcctgaaggtgtgtggaggggagatcctg
tcgctgttccagccgtctgagctgatggccatggtcgtcggcaacaacaactacaactgg
gaggagatggagaagaatgccgtttacaaaggggaatacactgccactcatccaacagtc
cgattgttctgggaggttttccacgagttccctctggaaaagaagaagcagttcttattg
ttcctgaccggcagcgaccgcatccccatccacggcatggagagcctgcgcatcatcatc
cagtccaccacggccgaggagcactacctgcctgtggctcacacctgctacaacctgctg
gacatgccccgctaccagaccaaagagatcctgcgccgccgccttactcaggccgtggag
cagtacgagggcttcagcctggtctga
DBGET
integrated database retrieval system
