Seriola lalandi dorsalis (Yellowtail amberjack): 111671468
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Entry
111671468 CDS
T06058
Symbol
ctdp1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase isoform X1
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
slal01009
]
111671468 (ctdp1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slal03021
]
111671468 (ctdp1)
Enzymes [BR:
slal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
111671468 (ctdp1)
Protein phosphatases and associated proteins [BR:
slal01009
]
HAD phosphatases
Fcp/Scp phosphatases
111671468 (ctdp1)
Transcription machinery [BR:
slal03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
111671468 (ctdp1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FCP1_C
BSH_Fcp1
NIF
Biotin_lipoyl
BRCT
Nairovirus_Gn
PTCB-BRCT
PBP1c_linker
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
111671468
NCBI-ProteinID:
XP_023284330
Ensembl:
ENSSLDG00000003779
LinkDB
All DBs
Position
Unknown
AA seq
1010 aa
AA seq
DB search
MEDPPADSGGGGGGAAAEGPAVQVADICWPTGAIPLRLLEWKVKPGSLVNVDSVLALCAP
IPQEKGAEAARLPEKKVKSDRAGVVKELCCQLGQVIPPGGVIVRIEECSHPIVMKGLCAE
CGQDLTQLQSTNGNQQTPISTATVSMVHSVPELMVSSEQAEQLGREDQQRLHRNKKLVLM
VDLDQTLIHTTEQHCQRMSNKGIFHFQLGRGEPMLHTRLRPHCKEFLEKIAKLYELHVFT
FGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDRED
VWKFAPNLITVKKYIYFQGTGDINAPPGSREAQMARKAGGPSSRPADSTESAGTPGAEEQ
NNGLRKRARDHNVSGKDEPTTSQSSQGVPTNERTHPTGVSEDESGQSKESVTEVVPGAGS
RETREGDRTNVKEDDSNRTQEAQEGVNSSAPSHESNNLDFDLSSDSDNDSITEKPPSSED
DSEGNPGQAKKEGVTQEPSDREGARIGDSKCRGEGENSSDAAEPSGVLLPDPELGNGCSD
RREPETESQNSEQSGVTMGEELLDQSMEEEEEEEEEEADNDQDDHLIYLEEVLERIHGEY
YARYEAFLKKEASETPDIRKIVPELKGKTLEGTMIVFSGLYPTNYPMERTREYYHAKALG
AKIGKNLVLSSLEPSRTTHLIAARAGTEKVRQGQGCKHLYVVNPDWLWSCLERWERVEEQ
LYPLKEDYSKTPRSNSPAAFPDNQSSLHKPIFHPAPIHHRPPPPAPEVRTYDPVTGKLIR
RGPQVSRPPPYLQASGSLLLSDHREQSCLRGTSKTQQDDAAGSSQDDEQPGPSRRKRQPS
MSETMPLYTLCKEDLESMDKEVDDILGEESDNESEGRGKEKPGNEEAEDEEEERRRRQQQ
QHQHQQQQQRRQQQQPGAGQIAAAGGLGPQALSMEERLHTPASEASLPSCVLRGHKRKHE
EAKEEEDEEEVENKQSADESSKDSNEEEEGSSSEADEMAAALEAELNDFM
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcctcctgcagattctggcggtggtggcggcggtgcagcagcggagggcccc
gcggtgcaggtggcagatatctgctggccgaccggggctatcccgctacggcttctggag
tggaaggtcaaacccgggtctcttgttaacgtggactccgtgttggcactgtgtgctccc
ataccccaggagaaaggggcagaggctgccaggctgccagagaagaaggtgaaatcggac
cgtgctggagtagtgaaggagctatgctgtcaacttggacaagtcatacctcccgggggt
gtcattgtcagaatagaagaatgcagccacccgatagtgatgaagggtttatgtgctgaa
tgtggccaggacctgactcagctgcagagcacaaatgggaaccagcaaactcccatctcc
acagcaacagtctccatggtgcacagtgtccccgagctgatggtcagctcagagcaagca
gaacagctgggcagagaagaccagcagagactccacagaaacaaaaagctggtcctgatg
gtagatctggaccagaccctgatccacaccactgaacagcactgccagcggatgtccaat
aagggcattttccatttccagctcgggcgtggagagcccatgctccacacacgactacgc
ccgcattgtaaggaattcctggagaaaattgccaaactctatgagttacacgtcttcacg
ttcgggagccgcctttatgcacacaccatagctggcttcctggatcctgaaaagaagctt
ttctctcatcggatcctttctagagatgaatgcatcgatcctttctccaagacggggaat
cttaggaaccttttcccttgtggggattcgatggtctgcataatcgatgaccgagaggac
gtgtggaagtttgcacctaacctcatcactgtgaagaaatacatttacttccaaggcaca
ggggacatcaatgctccccccggatcacgggaagctcagatggccaggaaagcaggaggc
ccctcaagtcggccggcagacagcacagaatcagcagggacacctggtgcagaagagcaa
aataatggcctcaggaaaagggcgagggaccacaacgtttccggaaaggatgagcccaca
acatctcagtcttctcagggagtaccaacaaatgaacggactcatcccacaggggtttcg
gaggatgaatcaggacagagtaaagagtcagtgactgaggtggtgcctggggcggggtca
agagaaactcgggagggggatagaacaaatgtaaaggaggatgatagcaacaggacgcaa
gaggcgcaggaaggtgtaaactcatcagcgcccagccatgagtccaataacttggacttt
gacctttccagtgacagtgacaatgactccattacagaaaagcctccttcatcagaggac
gatagtgaaggcaatcctggacaagcaaagaaggagggtgttacgcaagagcccagtgat
agggaaggggcgaggataggggacagtaaatgtcggggggaaggagaaaacagctcagat
gcagcagaaccttcaggagttcttctcccagaccccgagctgggaaatggctgctcagat
aggagagagccagaaacagagtctcagaatagtgaacaatctggggtcaccatgggggag
gagctgctggaccagagcatggaggaggaggaggaggaggaagaagaggaagctgataat
gaccaggacgaccacctgatctacctggaggaagtgctagaaaggattcacggcgagtac
tatgcccgctacgaggccttcctgaagaaggaggcctccgagacgccagacatccgcaag
attgtcccagagctgaaaggcaagacactggagggcacaatgatagtgttcagtggtctg
tacccgaccaactaccccatggagaggactcgtgagtactaccatgccaaggcactgggg
gccaagatcggcaagaatctggttctcagctccctagaacccagtcggacaacacatctc
atcgcagcacgagctggcaccgagaaggttcgtcagggacagggctgcaagcacctctat
gtcgtcaaccccgactggctgtggagctgtctggagcgctgggagagggtggaggagcag
ctgtacccgctaaaggaggactactccaagacgccacggagcaacagtccagcagctttc
cctgacaatcagagctccctgcataagcctattttccacccagctcccatccaccacaga
cctccacctccagccccagaggtccggacctacgaccccgtcacagggaagctgatccgc
aggggccctcaggtgtcacggccaccgccctatctccaggcatcagggtctttgttgctc
tctgatcacagagagcagtcttgtctcaggggaacttcaaagactcagcaggatgacgcg
gcggggtccagccaagacgacgagcagccgggaccatcgcgtcggaaacgacagccgagc
atgtcagaaactatgcctctatacacactgtgcaaggaggatctggagagcatggacaaa
gaggtggacgacatcttgggtgaagagagcgacaacgagagtgaagggcgaggaaaggag
aagccaggcaatgaggaggcggaagatgaagaggaggagcggcggcggcggcagcagcag
cagcatcagcaccagcagcagcagcagcggcggcagcagcagcagccaggagctggacag
atagcagcagcaggaggactcggtcctcaggcgctgagcatggaagagaggcttcacaca
ccagccagcgaggccagtctgccaagttgtgtgctaaggggccacaaacgtaagcacgag
gaagccaaggaggaggaggacgaggaggaggtggagaataagcagtctgctgacgagtcc
tccaaagactccaacgaggaagaggaaggcagcagctcagaggcggacgagatggccgcc
gccttggaggcagagctcaatgactttatgtga
DBGET
integrated database retrieval system
