Seriola lalandi dorsalis (Yellowtail amberjack): 111671524
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Entry
111671524 CDS
T06058
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111671524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slal03019
]
111671524
04121 Ubiquitin system [BR:
slal04121
]
111671524
03036 Chromosome and associated proteins [BR:
slal03036
]
111671524
03400 DNA repair and recombination proteins [BR:
slal03400
]
111671524
Messenger RNA biogenesis [BR:
slal03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
111671524
Ubiquitin system [BR:
slal04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
111671524
Chromosome and associated proteins [BR:
slal03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
111671524
DNA repair and recombination proteins [BR:
slal03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
111671524
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
Ank_2
zf-RING_6
Ank_4
Ank_5
Ank_3
BRCT_2
BRCT
Ank_KRIT1
zf-RING_5
zf-RING_10
zf-C3HC4_3
ANK_LRRK2
zf-C3HC4_4
Afi1
Motif
Other DBs
NCBI-GeneID:
111671524
NCBI-ProteinID:
XP_023284398
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MNNDVPVQTEDWKSTKEAVANFRRLLLCSKCSNLMREPVCLGMCEHMLCRSCAGSRAGDG
CVVCHSPAWVKDIQINRQLSSIIQLFCGLESLLNPIEQPDSSVTEIQTQPDSPVFKHKKN
FKIWFSPRSRKVRCTVEKPSEVIVPDSRSSGETAAAQPDTITAQGQDLSVFNFTSSSQDS
SSTQKCNNENKKKEKRSTKKNAAGRKALGATRTTRKQTMKVTKKNRLEAINQQWGISGDV
DALKEKEQPCAEGARRSSKRVSFLSPAVTSDQPKPEVPKGSTDELSPGSSTMRESLSGGS
TTQMNYPSSDGQSMSNGVIQKNSLSTNDLNPTEDPEKQENISPPKPSSKRTRVVEKVGTL
ETTPKRPRTSPGRRRKSPGQMSPVVLNPPFSITPRCDKSTKISRDEQGHSPSLLATIGRK
SPCSHGAPVGRPSTGSPAVMKRNHKGESLLHLAAIKGDVEAVKELLDQGADPNLKDNAGW
TPLHEACNLGHMAVVEVLVSRGALLNTPGYENDSPLHDAVRNGHPAIVKLLLQHGASQNV
LNLHGKQPADYAVSLEMLEIFQEASEGTQYANVSFSPSASLSAVSDFVRRDEMVAFFASK
LSQPAQLQLAKLGQLLGGKVVDTFSGSVSHIVVPEGHMPTTYSTLLGLLAGSWVVRYSWV
EACLQAGKWMPETEHEAGEGPQRSRVNRCSLLPPLFDGCFFFLLGSFKAPTKDELSKLLR
EGGGQLLSRQPKPDSDVTQTLSAAAYHALPGSDQALCTQYIIFDPQGPHKPTVVRRGKVW
SAPSTWIINCIAAFRLLSVPDSQNLV
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatgatgtccccgtgcagacagaggactggaagagcactaaagaggcggttgca
aactttcgacgactgctactttgctccaaatgttcaaatttaatgagggaacctgtgtgt
ctaggaatgtgtgagcatatgctgtgcaggtcctgtgctggctcccgtgcaggagatggc
tgcgtggtgtgtcacagccctgcatgggtgaaggatatccaaatcaataggcagctgagc
agcatcatacagctcttctgtggtttggagtccctgctcaatcccatagaacaaccagac
tcctctgtcactgagattcagacacaacctgacagccctgtctttaaacacaagaagaac
ttcaagatctggttcagcccccgcagccgcaaggtgcgctgcacagtggagaagccttca
gaggtcatagtaccagacagcaggtcttctggagaaacagctgcagcacagccagatacc
attactgctcaaggccaggacctgtcagttttcaatttcacctcgtcctcccaagactct
tcttctactcaaaaatgcaacaatgaaaacaaaaaaaaggagaagaggtcaactaagaaa
aatgctgctggcaggaaggcactgggagccacaaggaccacacgaaagcagaccatgaag
gtgacgaagaagaacaggctagaggctataaatcagcaatgggggatcagtggggatgta
gatgccttaaaggaaaaagagcagccctgtgctgaaggggcaaggaggtccagtaaaagg
gtttctttcctaagccctgctgtcacctccgaccagcctaagcccgaagtaccaaagggg
agtactgatgaactcagccctggcagcagtaccatgagggaaagcctctcaggaggcagc
accactcaaatgaattacccctcctcagatggtcagagcatgtcaaacggtgtcatccaa
aaaaactcactgtctacaaatgacctcaacccaactgaagatcctgaaaaacaggagaac
atttctcccccaaaaccttcctcaaaaagaaccagggtggtggagaaagttggcaccttg
gagactacaccaaaaaggcccaggacttccccaggccggaggagaaaatccccgggtcag
atgtcaccagttgtccttaaccctcctttttcgattacccccaggtgtgacaagagcacc
aaaatctctagagatgagcaaggacacagcccctctctcctagccaccattggtcgaaaa
tctccctgttctcatggtgcacctgttggacggcccagcacaggaagccctgcagttatg
aagaggaaccacaagggagagagcctgctacatctagctgctataaagggagatgtagag
gctgtcaaggaactgctggaccagggggctgaccctaacctgaaggataatgctgggtgg
acacctctgcacgaggcatgtaacctgggtcacatggcagttgtggaggttttggtctca
aggggagccctattgaacacacctggctatgaaaacgactcgccactccatgatgctgtg
aggaacggacatccagccattgtcaaactgctgctgcagcatggagcctcacagaatgta
cttaatctgcatggaaagcagcctgcagattatgcagtgagtctggagatgctggagatt
ttccaggaagcctcagagggaacccaatatgctaatgtctcttttagcccctcagccagt
ctttctgcggtgagtgactttgtgaggagagatgaaatggttgcgttttttgccagcaag
ctttctcagccagcacagcttcaactagccaaactgggacagctactaggaggaaaagtg
gttgacaccttttctggctcagtgagccacattgtggtgccagaaggacacatgcccact
acctactccaccctcctgggtctccttgctggcagctgggttgtcagatacagctgggtg
gaggcatgtctgcaggcgggcaagtggatgcccgaaactgagcacgaagcaggagaaggc
ccccagcgcagtcgcgtcaacagatgtagcttgctcccaccgctcttcgacggctgtttc
ttcttcctcctgggatcctttaaggcgcctaccaaagatgagctcagcaagctgctccga
gaaggaggaggtcagctcctgagccggcagcccaagcccgacagcgatgtgacacaaacc
ctgagtgcagctgcttaccacgccctgccaggctccgaccaggctctctgcacccagtac
attatctttgatcctcaaggacctcacaagcccacagtggtcagacgaggtaaggtgtgg
tcagctccctctacctggattatcaactgcattgcagccttccggctcctttccgtccct
gattctcaaaatctggtgtga
DBGET
integrated database retrieval system
