Seriola lalandi dorsalis (Yellowtail amberjack): 111672009
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Entry
111672009 CDS
T06058
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
slal01002
]
111672009 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slal04121
]
111672009 (usp42)
Enzymes [BR:
slal01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111672009 (usp42)
Peptidases and inhibitors [BR:
slal01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
111672009 (usp42)
Ubiquitin system [BR:
slal04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
111672009 (usp42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
111672009
NCBI-ProteinID:
XP_023285036
Ensembl:
ENSSLDG00000003719
LinkDB
All DBs
Position
Unknown
AA seq
1228 aa
AA seq
DB search
MTIVDRSSEKSDHESVGCKRSPFTSGDVGMDGSCSSSWAVGPTMPSDSPRLKAPGGCLGP
TPGAAVYNSTPSPVDRPKEQVISGGDGIDLPQKVLFPPERLNLKWTQVHRIGAGLQNMGN
TCFLNSALQCLTYTPPFTNYMLTREHSKTCHEPGFCMMCTMQNHIIQVFANSGNVIKPIG
VINELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKLDRQTQATTFIHQVFGGYLR
SRVKCLNCKAVSDTFDPFLDITLEIKTAPSVSKALEQFVKPEQLDGENAYKCTKCKKMVT
ASKRFTIHRSSNVLTLSLKRFANFSGGKITKDVKYPEYLDLRPFMSQSQGESQVYGLYAV
LVHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSVSDIRSVLNQQAYVLFYIKSNDVKKTG
DYGHMSHNPGIPGQSSPRPVVIPRINTTVHHNNIGFIGPQLPPHMTKSALHVNGNGSLRD
YPTSSKPSTSSSVVGKPSHGLASSSSISHSISRPTMIPDHDKRQKLSFFIGQGKQNRPSS
SSSSSSSSSSSYSQPSSASSSSSSSSSSLSSSQSTSDIHSDVRFVPRQLNHVNGTSCSNG
DHHTGGNGASFLVPYGQESSEESDQENCGALDNGCLAKSHLNGNNTTGDVFDNSPQATNG
ESGVHHNGNGLNGSTYGVSKSGQNGHHYGQHKINGHKISEKISGSNLGSVSSVAPIATNG
VDGDHGEPSKEVYNSASSHQASSSQSVHPAASESQHLSTSHTRAKTVSEPLLQHTASSAV
STPPSSTATKTHSVGSSESASASAHHGNPAALSTPPDCSQSTSGAPAAPQKVSVSGAEAK
DLPQTNGPSAGNEGRTDAKEQHPYKPSSKGNERQPSRDRERDRLHSDWSRDRERHYRDRS
QERESDSDRHRYRRDYRDHRHHHRSYRDRLPPHDRYYRDWDSERRYERTVHHPRERDRDR
CSHHYHHYHHHRSREDWDSERRGHGYSYREDSHSRWRWQQESRESRVTKDKSNGRERNYY
PSKEETSLPDTMPETSSKSKDSPPRAPLSTSRSAPNREDQNHKRTVDNPGKERDDSSEAC
HSKKHKKSKKKKKSKDKDRHRESGSSDMDSDRAAEMKKKKKKSRRQRDSDAEQHSPGATQ
SHKNRSSEERESRKRRHHDSKDAKHDNGFSPEKRRRTDYTDGSSDHLPPSHHTSPTNGSS
HRHLNGYTGNGYSRTNGDSHGFSSGLKH
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacagatcttcagaaaaatctgaccacgagtcagtcgggtgtaagcga
tcccccttcaccagtggagacgtggggatggacggcagctgttccagcagctgggcagtg
ggccccacaatgcccagtgactctccgaggctgaaggctccaggaggctgcctgggcccc
acgcctggagctgccgtctacaacagtaccccctcccctgtggaccgacccaaggagcaa
gtgataagcggtggtgacggcatcgacttgccccagaaggtcctcttccctccagagcgg
ctcaacctgaagtggacccaggttcaccgcattggtgcaggtctgcagaacatggggaac
acctgcttcctcaactcagccctgcagtgtctcacctacacccctccgttcaccaactac
atgctgacacgggagcactctaaaacatgtcatgagccggggttctgtatgatgtgtacc
atgcaaaaccacatcattcaggtttttgccaactctgggaatgtcattaagcccattggt
gtgatcaatgagctcaaaaggatagcaaagcacttccgctatggaagccaagaggatgcc
catgagttcctgcggtacacagttgatgctatgcaaaagtcctgcttacctggaaccaaa
ttggacaggcaaacacaggcaaccactttcatccatcaagtatttggcgggtacctaagg
tccagagttaaatgtttaaactgcaaagcagtctcagatacatttgacccttttctggat
attactcttgaaattaagacggctcccagtgtctccaaagctctggagcagtttgttaaa
ccagagcagctggatggagaaaacgcctacaaatgcaccaagtgcaaaaaaatggtcaca
gcctcaaagagatttaccatccaccgcagctctaacgttctcaccctctcactcaaacgc
tttgcaaacttcagtggaggcaaaattactaaggatgtgaaatatccagagtacctggac
ctgcggcctttcatgtctcagtcccagggagagtcccaggtctacgggctgtacgctgta
ctggtccactctggattcagctgtcatgctggacactatttctgctatattaaggcgagc
aacggtcagtggtatcaaatgaacgactcctctgtgtctgtcagtgacatcaggtctgtt
ctcaaccagcaggcatatgtccttttctacatcaaatccaatgatgtgaaaaaaacaggg
gactacggtcacatgagccataacccgggaatccctggtcagtcgtctccgcgacctgtg
gtgataccacgcatcaacaccaccgtccaccacaacaacatcggcttcataggtccccag
ctgcccccacacatgactaagagcgctctccacgtcaatgggaatggatctctgagggac
tatcccacaagctcgaagcctagcaccagcagcagtgttgtgggaaaacctagccatgga
ctggcctcttcctcctccatctcccactcgatcagccggcccacaatgatcccagatcac
gacaaacgccagaagctttcattctttattggacaaggcaaacagaaccgcccatcctcc
tcctcctcctcttcctcctcctcctcatcctcttacagccagccgtcctctgccagcagc
agcagctcctcctcctccagctctttatcctcttcacaatctacctcagacatccactca
gacgttcgctttgttcctcgtcagcttaaccatgttaacggcacgtcttgcagtaacggg
gatcaccatactggaggtaatggagcatcgttcctggtgccgtacggccaagagtcgtca
gaggaatcagaccaggagaactgtggcgctctggataacggctgtttagccaagtcgcat
cttaatggaaataacacaacaggagatgtctttgataattctcctcaagctacaaatgga
gagtcaggagtgcaccataatggtaacggattaaatggatcaacctacggcgtctctaaa
tcaggccaaaacgggcaccattatggacaacacaaaatcaatggacacaaaatctctgag
aagatctctggcagtaatcttggaagtgtttcctctgtcgctcccattgctactaatgga
gtagatggtgaccatggtgaaccaagcaaagaggtttataattcagcctcatcccaccag
gccagttcttctcagagcgtccatccggctgccagtgaaagccagcacctctccacttct
cacacaagggctaaaactgtgtctgaacccctgcttcagcatacagcatcttccgctgtc
agcacgccaccttcatctactgctacaaagacccattctgtcggatctagtgaatctgct
tccgcttctgcacatcatggcaaccctgcggccttatccaccccgccagactgctcccaa
agcaccagtggggcgcctgctgctccacagaaggttagcgtaagtggggctgaagccaag
gatctaccacagaccaatggaccgtcagcagggaatgaaggacgtacagatgctaaggag
cagcacccgtacaagcccagctctaaagggaatgaaagacaaccttcccgagacagggag
agagacagactgcactctgactggagcagagacagagaaagacactacagggacaggagt
caggagcgagaaagtgacagtgatcgtcatcgatacaggcgggactaccgagatcaccgc
caccatcatcgctcgtacagggatcgtttgcctccccatgatcgatactacagggactgg
gactctgagcgtcgctatgagcggactgtccaccaccccagggagcgcgatcgcgacagg
tgctctcaccattaccaccactaccaccaccacagatccagagaggactgggactctgag
cggaggggacacggctattcataccgcgaggactctcacagtcgctggaggtggcagcag
gagagtcgagaatcccgggtgacaaaggacaagagcaacggcagggagaggaactattac
ccttcaaaagaggagacttccttgccggacacaatgccagaaacatcctcaaagtccaag
gactcgccccctcgggctcctctctccacgtctagatcagctccaaacagggaggatcaa
aatcacaaaaggactgttgataatccgggcaaggagagagacgacagctctgaggcctgt
cactctaaaaaacacaaaaagagcaagaaaaagaagaagtcaaaggataaagacagacac
cgtgagagcggtagttctgacatggattcagacagagccgctgaaatgaaaaagaaaaag
aagaaaagcaggaggcagcgggacagtgatgcggagcagcacagtccaggagccactcag
agccacaagaacagaagcagtgaggagagggaaagccgcaagcgacgtcaccatgacagc
aaggacgctaaacatgacaacggtttttcaccggaaaaacgccggcgcacagactacact
gatggcagcagtgaccatctacccccctctcatcacacctcacccactaacggttcatct
caccgccatctcaatggatacacaggaaacggttacagccgaaccaatggcgactcccac
ggattctccagtggcctgaaacattga
DBGET
integrated database retrieval system
