Seriola lalandi dorsalis (Yellowtail amberjack): 111672257
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Entry
111672257 CDS
T06058
Name
(RefSeq) homeobox-containing protein 1-like isoform X1
KO
K24885
homeobox-containing protein 1
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slal03000
]
111672257
Transcription factors [BR:
slal03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
111672257
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
HTH_26
DUF494
HTH_TSHZ3
HTH_31
HTH_24
CUT
HTH_37
Motif
Other DBs
NCBI-GeneID:
111672257
NCBI-ProteinID:
XP_023285402
Ensembl:
ENSSLDG00000015485
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MFQQCDEPRFTIEQIDLLQRLRRTGITQAEVLHALDTLDHLDRQHGHKLTHKPSYIPPSS
SLSSSNTVTASSSMTSTATQTSFPDNQLSLSPNNNFDTTSLPLPVPVASPVVMAAVAQNG
LVAVSNGKLSPPRFPLGVVSGSVTAPGYGFEAGEEDIDVDEKVEDLMRRDSALIKEEIKS
FLANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFFRWYQLEKSNPGATLAMR
AAPLALEDMMDWQQAPPTFGAAPGGFRLRRGSRFTWRKECLAVMESYFSDNQYPDEAKRE
EIATACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKDIKRRANIEAAILESHGIEVQSP
GGQSNSDEVDGNDFPDQGCEVSLFDKRASARQFGFSRADLSSPTQVPTLLPSWFSALGRG
GLSGQRGTSLIGRSLVTGTGPQAEGSRLTGVSWSPPSPSLQDEPTIHSVLSEPQDPIGLE
KEAVNHSSQALANQVDGAACSMGNDIKTETLEDD
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgttccagcagtgtgacgagcctcgtttcaccattgagcagattgacctcctccagagg
ctaaggaggacagggatcacccaggcggaggtcctccatgccctggacaccctggaccac
ctggaccggcaacatggacacaagttgacccataaaccttcctacatacctccatcatca
tccttgtcttcttccaacactgtcaccgcctcttcctccatgacttccactgccactcag
acaagtttcccagacaaccaactctcactgtcacctaataacaacttcgacaccacttcc
ctgcccctaccagttccagtagcctcacctgtcgtcatggcagcggtagcacagaatggt
ctagttgctgtcagcaatgggaagctgtcaccgccccgctttcctcttggtgtggtcagc
ggcagtgtgacagcaccaggctacgggtttgaggccggtgaagaggacatagatgtggat
gagaaggtggaggacttgatgagaagggacagtgctttgatcaaagaggagattaagtcc
tttctggcgaacaggcgtatttcccaggctgtggtcgctcaggtaacggggatcagtcag
agtcggatctcccactggctcctacaacagggatcggacctcagcgagcagaagaaacga
gccttcttccgctggtaccagctggaaaagtccaacccaggtgccactctggccatgcga
gctgccccactggctctggaggacatgatggactggcaacaagctccgcccacctttgga
gctgcccctgggggcttccgtctccggcgagggagcagattcacctggaggaaggagtgt
ctggctgttatggagagctacttcagtgataaccagtaccctgatgaagcgaagagagag
gagattgccactgcctgcaatgctgtcattcagaaaccaggaaagaagctgtctgatttg
gagagggtcacatctctgaaggtctacaactggtttgccaaccgccgcaaagacatcaag
aggcgtgctaacattgaagcagccatcttggagagtcacggcatcgaggttcagagtcca
ggaggtcagtccaacagtgacgaggtggatggcaacgacttccctgaccagggttgtgag
gtgtccttatttgacaagagagcttcagccaggcagtttggtttcagtcgagctgacctc
tcctctccaacccaggttcccacattgctccccagctggttttccgccctgggtagagga
ggcctgtctggacagaggggcacttctctgattggccgctccctagtgacggggacgggt
cctcaggcagaaggttccagattgacaggcgtgtcttggtctccgccctccccttccctc
caggacgaacccaccattcacagcgtgctgtccgagccccaggacccaatcggattggag
aaggaggctgtcaatcacagcagccaagccctagccaatcaggtggacggggcagcgtgc
agtatgggaaatgacatcaagacggaaacgctggaggatgactga
DBGET
integrated database retrieval system
